Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005490
CDS Infomation

pacid=37450098 polypeptide=PGSC0003DMP400003836 locus=PGSC0003DMG400002144 ID=PGSC0003DMT400005490.v4.03 annot-version=v4.03
Sequence

ATGGGTGAAGAAGTGACAATTATGGATGGTGATGGTTTCGCCGGAGATGATAATCGTGTT
GTCGAGTGGGAAGATGGACTTCCGAGTTTTGACGATCTGACGCCGTTATCTCAGGCTTTA
ATCCCGCCGGAGCTAGCGTCGGCGTTTAGAATTACGCCGGAGCCGGTGAAGACGATGACG
GATGTGAATCGTGCTTCGGAGAGTGCTTTTTCGTCTCTCCGTGCAGGACAGTTACATTTG
TTGTCGGAGAAGTATAATTTTAATGAAGGAAGGAATGGAGATAGAAATCATGAGAATGAT
GAGGTGGATCTGACAAGAGATGGATCCGAGTCGAGGAAGACACGGAGAATTGACCCGGAG
ATGGTTACTGAAGAGGCTGATTCGGCATTGAGGAATGAGAATTGTGGAGATGATAATTCA
GCTAAGATGCAGAAGCGACCGCGGTTAGTCTGGACGCCACAGCTGCATAAGCGATTTGTG
GATGTTGTGGCGCATTTAGGGATTAAAAATGCTGTGCCGAAGACGATTATGCAGCTGATG
AATGTGGAAGGACTAACAAGGGAAAATGTTGCTAGTCATTTACAGAAGTATAGGTTGTAT
TTGAAGAGAATGCAAGGGTTATCGAATGAGGGTCCTTCGTCGTCTGATCATTTGTTCGCT
TCCACGCCTGTGCCACAGAGTTTGCAGCAGTCCGGTGGTAATGGACACAGTGGTAATGGT
CATAGTAGTAATGGACATATGCCAATGCCTATGCCTATGCCAATGATGTATCCGCCGCAA
ATGGTGCCAATGCCTATGATGGGAATGTCAGGACATGGGTTTCATCATCAGTATAATATG
GGGCAACCGCGGGACTGGTCTGGAAATAAATTTGGTTCTTATCATCATGTTGCTCCTGGT
GAAAAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400003836
PEP Infomation

pacid=37450098 transcript=PGSC0003DMT400005490 locus=PGSC0003DMG400002144 ID=PGSC0003DMT400005490.v4.03 annot-version=v4.03
Sequence

MGEEVTIMDGDGFAGDDNRVVEWEDGLPSFDDLTPLSQALIPPELASAFRITPEPVKTMT
DVNRASESAFSSLRAGQLHLLSEKYNFNEGRNGDRNHENDEVDLTRDGSESRKTRRIDPE
MVTEEADSALRNENCGDDNSAKMQKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLM
NVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDHLFASTPVPQSLQQSGGNGHSGNG
HSSNGHMPMPMPMPMMYPPQMVPMPMMGMSGHGFHHQYNMGQPRDWSGNKFGSYHHVAPG
EK*

Transcript Sequence

Transcript ID

PGSC0003DMT400005490
Transcript Infomation

pacid=37450098 locus=PGSC0003DMG400002144 ID=PGSC0003DMT400005490.v4.03 annot-version=v4.03
Sequence

ATGGGTGAAGAAGTGACAATTATGGATGGTGATGGTTTCGCCGGAGATGATAATCGTGTT
GTCGAGTGGGAAGATGGACTTCCGAGTTTTGACGATCTGACGCCGTTATCTCAGGCTTTA
ATCCCGCCGGAGCTAGCGTCGGCGTTTAGAATTACGCCGGAGCCGGTGAAGACGATGACG
GATGTGAATCGTGCTTCGGAGAGTGCTTTTTCGTCTCTCCGTGCAGGACAGTTACATTTG
TTGTCGGAGAAGTATAATTTTAATGAAGGAAGGAATGGAGATAGAAATCATGAGAATGAT
GAGGTGGATCTGACAAGAGATGGATCCGAGTCGAGGAAGACACGGAGAATTGACCCGGAG
ATGGTTACTGAAGAGGCTGATTCGGCATTGAGGAATGAGAATTGTGGAGATGATAATTCA
GCTAAGATGCAGAAGCGACCGCGGTTAGTCTGGACGCCACAGCTGCATAAGCGATTTGTG
GATGTTGTGGCGCATTTAGGGATTAAAAATGCTGTGCCGAAGACGATTATGCAGCTGATG
AATGTGGAAGGACTAACAAGGGAAAATGTTGCTAGTCATTTACAGAAGTATAGGTTGTAT
TTGAAGAGAATGCAAGGGTTATCGAATGAGGGTCCTTCGTCGTCTGATCATTTGTTCGCT
TCCACGCCTGTGCCACAGAGTTTGCAGCAGTCCGGTGGTAATGGACACAGTGGTAATGGT
CATAGTAGTAATGGACATATGCCAATGCCTATGCCTATGCCAATGATGTATCCGCCGCAA
ATGGTGCCAATGCCTATGATGGGAATGTCAGGACATGGGTTTCATCATCAGTATAATATG
GGGCAACCGCGGGACTGGTCTGGAAATAAATTTGGTTCTTATCATCATGTTGCTCCTGGT
GAAAAATAG