Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005481
CDS Infomation

pacid=37450233 polypeptide=PGSC0003DMP400003830 locus=PGSC0003DMG400002139 ID=PGSC0003DMT400005481.v4.03 annot-version=v4.03
Sequence

ATGGATCCTCCATCCAACAAGACGCCTGATTCTGCAAACACCTCAAAACTCGAGGATCAG
ATCGTCTTATCTAGCTTCGATCAACCTCTAAATCCACCACATTGTGATAAAGACGAACGG
AGCGACAAGCAATCAGCAAAGTATGCAGAGGAGGTTGAGTTAACAGAAATATTTGATATG
GTTCTTTTGTGTACATGTGCTAAGGCCAAGAAAGTCTCTTGTGATATCAGTTCTGAAATT
TCATCTGAAGTAGAAAAGAGTCCTAAAAATGCAGCTTTGGATTTAAGGACTCTGTTAATT
ATCTGTGCACAATTTGTTGCTTCTGGTGATCAAGAATCAGCAAGTGAAATGCTGAAGCAG
ATAAGGCAAGAAAGTTCACCAACCGGCGACGCATATCAAAGGCTGGCTAGTGTATTTGCT
GATGGCCTCGTGGCTCGGTTGTCCAGGGACGGAGCTACATTGTCTAAAGGGGGTTCAATT
GAATTCCTGGCTCTGCCAATGAGCTTGCCATATGCTGCCCTTACACCAAAGAGGATGACA
GATACTGCTGACAATCTAAAAGCATACCACGTTCACCTTTCATCGTGCCCTTTCATCAAA
GTATCAATCTCCTTCGCAAATAAAATGATCTTCCACACAGCACGCAACGCTACAACACTA
CATATCATAGATTTTGGTATCCTTTATGGATTCCAATGGCCAATACTCATCCAGCATCTC
TCAGTTATGCCTGGTGGACCTCCAAAGCTTCGCATTACTGGAATAAACCTTCCTCAACCC
GGCTTCAGGCCAGCAGAAGAGACAGGTCGTCTCTTGGCAAGATACTGTGAACGTTTTAAC
GTTCCATTTGAGTATAATGCCATAGTGATACAAAATTGGGAGAGAATTGAAATCAAGGAC
TTGAAACTTGAAAGTGGTGAATTTGTTGCTGTGAACTGTCTTTTTCGTTTTGAGAATTTA
TCAGATGAGACAGTGGATGTAGAATGTCCAAGGGACGCGGTCCTGAGCTTAATTCAAAAG
ATGAATCCAGATATCTTCGTGCAAGGTGTTACTAACGGATCTTACAATTCCCCCTTCTTC
GTCACTCGCTTCCAAGAAGCCCTCTTGCACTACTCAGCTCTATTCGATATGTTTGATGCT
ACATTACCCCGAGATAATCAACAAAGACTGCATTTTGAACAAGAACTTTATAGGCGTGAG
GCGATGAATGTCATAGCCTGTGAGGGTGCTGAGAGGGTAGAGAGGCCTGAGACGTACGAG
CAATGGCAAGTCCGCAACGTGAGGGCTGGATTCAAGATTCTTCCATTGAACCAAGAAGTC
ATGAAAACATTGAAGGACAATGTAGAGGCAGGGTACCACAGAGATTTTGTGTTGTATGAG
GATGGTAATTGGATGGTGCAGGGATGGAAAGATAGGATCATTTGTGCTAGCTCTTGCTGG
ATTCCTCTACATAGGAGTTGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400003830
PEP Infomation

pacid=37450233 transcript=PGSC0003DMT400005481 locus=PGSC0003DMG400002139 ID=PGSC0003DMT400005481.v4.03 annot-version=v4.03
Sequence

MDPPSNKTPDSANTSKLEDQIVLSSFDQPLNPPHCDKDERSDKQSAKYAEEVELTEIFDM
VLLCTCAKAKKVSCDISSEISSEVEKSPKNAALDLRTLLIICAQFVASGDQESASEMLKQ
IRQESSPTGDAYQRLASVFADGLVARLSRDGATLSKGGSIEFLALPMSLPYAALTPKRMT
DTADNLKAYHVHLSSCPFIKVSISFANKMIFHTARNATTLHIIDFGILYGFQWPILIQHL
SVMPGGPPKLRITGINLPQPGFRPAEETGRLLARYCERFNVPFEYNAIVIQNWERIEIKD
LKLESGEFVAVNCLFRFENLSDETVDVECPRDAVLSLIQKMNPDIFVQGVTNGSYNSPFF
VTRFQEALLHYSALFDMFDATLPRDNQQRLHFEQELYRREAMNVIACEGAERVERPETYE
QWQVRNVRAGFKILPLNQEVMKTLKDNVEAGYHRDFVLYEDGNWMVQGWKDRIICASSCW
IPLHRSC*

Transcript Sequence

Transcript ID

PGSC0003DMT400005481
Transcript Infomation

pacid=37450233 locus=PGSC0003DMG400002139 ID=PGSC0003DMT400005481.v4.03 annot-version=v4.03
Sequence

ATGGATCCTCCATCCAACAAGACGCCTGATTCTGCAAACACCTCAAAACTCGAGGATCAG
ATCGTCTTATCTAGCTTCGATCAACCTCTAAATCCACCACATTGTGATAAAGACGAACGG
AGCGACAAGCAATCAGCAAAGTATGCAGAGGAGGTTGAGTTAACAGAAATATTTGATATG
GTTCTTTTGTGTACATGTGCTAAGGCCAAGAAAGTCTCTTGTGATATCAGTTCTGAAATT
TCATCTGAAGTAGAAAAGAGTCCTAAAAATGCAGCTTTGGATTTAAGGACTCTGTTAATT
ATCTGTGCACAATTTGTTGCTTCTGGTGATCAAGAATCAGCAAGTGAAATGCTGAAGCAG
ATAAGGCAAGAAAGTTCACCAACCGGCGACGCATATCAAAGGCTGGCTAGTGTATTTGCT
GATGGCCTCGTGGCTCGGTTGTCCAGGGACGGAGCTACATTGTCTAAAGGGGGTTCAATT
GAATTCCTGGCTCTGCCAATGAGCTTGCCATATGCTGCCCTTACACCAAAGAGGATGACA
GATACTGCTGACAATCTAAAAGCATACCACGTTCACCTTTCATCGTGCCCTTTCATCAAA
GTATCAATCTCCTTCGCAAATAAAATGATCTTCCACACAGCACGCAACGCTACAACACTA
CATATCATAGATTTTGGTATCCTTTATGGATTCCAATGGCCAATACTCATCCAGCATCTC
TCAGTTATGCCTGGTGGACCTCCAAAGCTTCGCATTACTGGAATAAACCTTCCTCAACCC
GGCTTCAGGCCAGCAGAAGAGACAGGTCGTCTCTTGGCAAGATACTGTGAACGTTTTAAC
GTTCCATTTGAGTATAATGCCATAGTGATACAAAATTGGGAGAGAATTGAAATCAAGGAC
TTGAAACTTGAAAGTGGTGAATTTGTTGCTGTGAACTGTCTTTTTCGTTTTGAGAATTTA
TCAGATGAGACAGTGGATGTAGAATGTCCAAGGGACGCGGTCCTGAGCTTAATTCAAAAG
ATGAATCCAGATATCTTCGTGCAAGGTGTTACTAACGGATCTTACAATTCCCCCTTCTTC
GTCACTCGCTTCCAAGAAGCCCTCTTGCACTACTCAGCTCTATTCGATATGTTTGATGCT
ACATTACCCCGAGATAATCAACAAAGACTGCATTTTGAACAAGAACTTTATAGGCGTGAG
GCGATGAATGTCATAGCCTGTGAGGGTGCTGAGAGGGTAGAGAGGCCTGAGACGTACGAG
CAATGGCAAGTCCGCAACGTGAGGGCTGGATTCAAGATTCTTCCATTGAACCAAGAAGTC
ATGAAAACATTGAAGGACAATGTAGAGGCAGGGTACCACAGAGATTTTGTGTTGTATGAG
GATGGTAATTGGATGGTGCAGGGATGGAAAGATAGGATCATTTGTGCTAGCTCTTGCTGG
ATTCCTCTACATAGGAGTTGCTGA