Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005476
CDS Infomation

pacid=37453751 polypeptide=PGSC0003DMP400003825 locus=PGSC0003DMG400002138 ID=PGSC0003DMT400005476.v4.03 annot-version=v4.03
Sequence

ATGGAGTTGCACAAGAGGTTAGATTATGGATTCATTGGCTATCAGGTGCCTCATATTCCC
CGAGCTACGAGATCAGCCAGGGGAAGGGGAAATATTAGGAAGAAATCTGATAGCAATGAA
ATGTGTGCTTTTGACTTGTTGACTACTGTAGCTGGGAAGTTACTCCTGGAAGGAGAAAGC
ACTTCAAAATCTAGTGGGAAAGATCAGTCTGCAGTTCTGAAAGATACTACTGAGACGGTT
AAGGAGGATGAAGATACACCATTAAAAGAAAATCGTTGTAATGAGCAGTGCCAGGAGCGG
GGGTTCTTCATTTCTCAGATTGTTTCAGAAGCTCCTGTAGTAAATCATTGTTTAAGCAAA
TCGACAGATACGTTATCTGGACCAGCATCTGTAATTACAAGTTCAGATTGCTCGGAGAAG
TTGGGTTCTGCAGAACTATTCATAAATGGTGAACGCAAAACTGAAAACAGGAACTGTTCT
ACTAAGGTAGAACATGAGTTATCTGGTTGTGGAGATTTTTCTAGCTGTACATTAGGCACT
GAAAGTAAAAAACAAGTGAAAATCAACCTGTCAAATGATGCAGCGATTACAACGAATAAG
AGGGCTGCAGTTTGCAGTTCAGAGTTTCCTGATCCTTGGGATAGGAAGCGTTCAATGCTT
GTTGCTTCGGACAATACTGTAAAGTTATCTCTTTCTACGGACCCTGATCCTTTTGGGTCC
TTTCCGGTGATCCGGAATGATGTACAGTTAGCTAACAAAGATGATGACGAAAAATCTTGT
GGGTGCACTCAACCTAGCACCAGAAATATGGCCTTCAGGCCAGCACCGCATGTAGGAGAT
TGGAGGATGAGGAAGTTACAGGCATCCAAATACTGGGAAGTAAATCCGCAATCTGATGAT
GAGGGACATGTCAATGTTGATAATGAAACAAGGCATGTCTACCAGAAAAGGGAAAATGTC
TACACGAGCGAAAGGTCTCAGAGAGATTTTCCTTTCAAGAAAAGAAAGCTCTATTATTGT
AACTCGTTCTCCAATTCTGATGGAGGGAGTAGTGATGGAATATGTAGTTCTCCAACAAAA
GACTTAAATAGAGATGCATCCGGTTATAGTCTAGCATCTTCAGGAGCCTGTGCAGCAGCT
GGGACGTCAATCCCCAAAGCAGCTAGTGCATCCTTCAGGTCTAATGACTCCCATGTGAAG
CTCAAGATCAAGTCTTTCAGAGTTCCTGAGCTTTTTGTTGAGATTCCGGAAAATGCAACT
GTTGGTTCTTTAAAGAGGACCGTAATGGAAGCAGTGACGGCAATACTTGGTGGTGGGCTG
CGGATTGGTGTAGTTTTTCAGGGTAAGAAGGTTAGAGATGACAGCAAGACCTTATTTCAG
GCTGGAATTTCACATGATGACAAACTTGATGCTCTTGGTTTTACCCTGGAGCCTAGCCCC
TCTCGAGCTTCCCCACCTCTAGGTCCAGAAGGTCGTTCTCCTGTACTTCCTTGTGAGACA
CCTCAACCACTAACAAGGTGCTCACCTGGTTCTACTATTATTCATAATGGCATGCAACAG
GAGACGTATAATGCCTTCCCGGATTATTCAGGAACAAATTTGAGTAACTTCATTGAAAGC
GATCACGATTCAGCTCCATCCCCTCCTGATGCCTCTCTGGAGAAAAATGCTGCAGATTCA
AGAGCATTGGTTCCAGTTGCTGCAATGGATGCAGAAGCCTTGGCTGTAGTTCCAATGCGA
AAGCCCAAGCGATGTGAAACTGTGCAGCGTCGAATCCGTAGACCTTTTTCTGTTTTCGAA
GTGGAAGCACTTGTTCAAGCTGTTGAGAAGCTTGGAACTGGAAGGTGGCGTGATGTCAAA
ATGCGAGCTTTTGATAACGCCAAACACAGAACTTATGTCGATTTAAAGGACAAATGGAAA
ACACTGGTGCACACAGCGCGAATATCTCCTCAACAAAGGAGAGGTGAGCCTGTGCCTCAG
GAACTCCTCGACCGAGTCCTCATTGCTCATGCTTACTGGTCCCAACAACAAGCTAGACAA
CAGATGAAACATCAATCCGAGACGCGTCTTTTGCTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400003825
PEP Infomation

pacid=37453751 transcript=PGSC0003DMT400005476 locus=PGSC0003DMG400002138 ID=PGSC0003DMT400005476.v4.03 annot-version=v4.03
Sequence

MELHKRLDYGFIGYQVPHIPRATRSARGRGNIRKKSDSNEMCAFDLLTTVAGKLLLEGES
TSKSSGKDQSAVLKDTTETVKEDEDTPLKENRCNEQCQERGFFISQIVSEAPVVNHCLSK
STDTLSGPASVITSSDCSEKLGSAELFINGERKTENRNCSTKVEHELSGCGDFSSCTLGT
ESKKQVKINLSNDAAITTNKRAAVCSSEFPDPWDRKRSMLVASDNTVKLSLSTDPDPFGS
FPVIRNDVQLANKDDDEKSCGCTQPSTRNMAFRPAPHVGDWRMRKLQASKYWEVNPQSDD
EGHVNVDNETRHVYQKRENVYTSERSQRDFPFKKRKLYYCNSFSNSDGGSSDGICSSPTK
DLNRDASGYSLASSGACAAAGTSIPKAASASFRSNDSHVKLKIKSFRVPELFVEIPENAT
VGSLKRTVMEAVTAILGGGLRIGVVFQGKKVRDDSKTLFQAGISHDDKLDALGFTLEPSP
SRASPPLGPEGRSPVLPCETPQPLTRCSPGSTIIHNGMQQETYNAFPDYSGTNLSNFIES
DHDSAPSPPDASLEKNAADSRALVPVAAMDAEALAVVPMRKPKRCETVQRRIRRPFSVFE
VEALVQAVEKLGTGRWRDVKMRAFDNAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQ
ELLDRVLIAHAYWSQQQARQQMKHQSETRLLL*

Transcript Sequence

Transcript ID

PGSC0003DMT400005476
Transcript Infomation

pacid=37453751 locus=PGSC0003DMG400002138 ID=PGSC0003DMT400005476.v4.03 annot-version=v4.03
Sequence

ATGGAGTTGCACAAGAGGTTAGATTATGGATTCATTGGCTATCAGGTGCCTCATATTCCC
CGAGCTACGAGATCAGCCAGGGGAAGGGGAAATATTAGGAAGAAATCTGATAGCAATGAA
ATGTGTGCTTTTGACTTGTTGACTACTGTAGCTGGGAAGTTACTCCTGGAAGGAGAAAGC
ACTTCAAAATCTAGTGGGAAAGATCAGTCTGCAGTTCTGAAAGATACTACTGAGACGGTT
AAGGAGGATGAAGATACACCATTAAAAGAAAATCGTTGTAATGAGCAGTGCCAGGAGCGG
GGGTTCTTCATTTCTCAGATTGTTTCAGAAGCTCCTGTAGTAAATCATTGTTTAAGCAAA
TCGACAGATACGTTATCTGGACCAGCATCTGTAATTACAAGTTCAGATTGCTCGGAGAAG
TTGGGTTCTGCAGAACTATTCATAAATGGTGAACGCAAAACTGAAAACAGGAACTGTTCT
ACTAAGGTAGAACATGAGTTATCTGGTTGTGGAGATTTTTCTAGCTGTACATTAGGCACT
GAAAGTAAAAAACAAGTGAAAATCAACCTGTCAAATGATGCAGCGATTACAACGAATAAG
AGGGCTGCAGTTTGCAGTTCAGAGTTTCCTGATCCTTGGGATAGGAAGCGTTCAATGCTT
GTTGCTTCGGACAATACTGTAAAGTTATCTCTTTCTACGGACCCTGATCCTTTTGGGTCC
TTTCCGGTGATCCGGAATGATGTACAGTTAGCTAACAAAGATGATGACGAAAAATCTTGT
GGGTGCACTCAACCTAGCACCAGAAATATGGCCTTCAGGCCAGCACCGCATGTAGGAGAT
TGGAGGATGAGGAAGTTACAGGCATCCAAATACTGGGAAGTAAATCCGCAATCTGATGAT
GAGGGACATGTCAATGTTGATAATGAAACAAGGCATGTCTACCAGAAAAGGGAAAATGTC
TACACGAGCGAAAGGTCTCAGAGAGATTTTCCTTTCAAGAAAAGAAAGCTCTATTATTGT
AACTCGTTCTCCAATTCTGATGGAGGGAGTAGTGATGGAATATGTAGTTCTCCAACAAAA
GACTTAAATAGAGATGCATCCGGTTATAGTCTAGCATCTTCAGGAGCCTGTGCAGCAGCT
GGGACGTCAATCCCCAAAGCAGCTAGTGCATCCTTCAGGTCTAATGACTCCCATGTGAAG
CTCAAGATCAAGTCTTTCAGAGTTCCTGAGCTTTTTGTTGAGATTCCGGAAAATGCAACT
GTTGGTTCTTTAAAGAGGACCGTAATGGAAGCAGTGACGGCAATACTTGGTGGTGGGCTG
CGGATTGGTGTAGTTTTTCAGGGTAAGAAGGTTAGAGATGACAGCAAGACCTTATTTCAG
GCTGGAATTTCACATGATGACAAACTTGATGCTCTTGGTTTTACCCTGGAGCCTAGCCCC
TCTCGAGCTTCCCCACCTCTAGGTCCAGAAGGTCGTTCTCCTGTACTTCCTTGTGAGACA
CCTCAACCACTAACAAGGTGCTCACCTGGTTCTACTATTATTCATAATGGCATGCAACAG
GAGACGTATAATGCCTTCCCGGATTATTCAGGAACAAATTTGAGTAACTTCATTGAAAGC
GATCACGATTCAGCTCCATCCCCTCCTGATGCCTCTCTGGAGAAAAATGCTGCAGATTCA
AGAGCATTGGTTCCAGTTGCTGCAATGGATGCAGAAGCCTTGGCTGTAGTTCCAATGCGA
AAGCCCAAGCGATGTGAAACTGTGCAGCGTCGAATCCGTAGACCTTTTTCTGTTTTCGAA
GTGGAAGCACTTGTTCAAGCTGTTGAGAAGCTTGGAACTGGAAGGTGGCGTGATGTCAAA
ATGCGAGCTTTTGATAACGCCAAACACAGAACTTATGTCGATTTAAAGGACAAATGGAAA
ACACTGGTGCACACAGCGCGAATATCTCCTCAACAAAGGAGAGGTGAGCCTGTGCCTCAG
GAACTCCTCGACCGAGTCCTCATTGCTCATGCTTACTGGTCCCAACAACAAGCTAGACAA
CAGATGAAACATCAATCCGAGACGCGTCTTTTGCTTTAA