Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005467
CDS Infomation

pacid=37475019 polypeptide=PGSC0003DMP400003819 locus=PGSC0003DMG400002132 ID=PGSC0003DMT400005467.v4.03 annot-version=v4.03
Sequence

ATGGATAATCAAAGCAGCAAATGGAGAAAATTTATACTTGTACTCAATTGTATCGCTCTT
GGCATAGGCTATTGTGGTGGTCCTGTAATCTCACGTCTCTATTTCCTCCACGGTGGCCAA
AGAATTTGGCTTTCGAGTTGGCTAGCATGCATTGGATGGCCAATTATTCTCATTGTTCTC
ATCATCGCTTATTTTTACCGTCTAAAAACTCAGGGCTCTGATATCAACTTTTTATGTATA
ACTCTTCAGGAGTTCACATCATCAGCCGCGTTAGGTATTCTAGTCGGCCTAGCTGGTTAT
CTTTACACGTGGGGACCCGCAAAACTCCCTGTTTCTACTTCAACCGTTATTTATGCAGCA
CAACTCGGATTTACCGTGATATTTGCTTTTCTTATAGTAAAGCAGAAATTGACTGCGTAT
TCGGTGAATGCGGTTGTTTTATTGATTGTTGGAGCGGGAACTTTAGCGCTACGAGCGGAG
AGTGATCGACCAGAAGGGGAGTCAACTAAACAATATGTTTTGGGGTTTGTAATGACACTT
TTGGCTGCTGCTTCAACAGGGCTTGCTCTGCCTCTACTTGAGTTGATTTACATCAGGGCT
AAAAAAAATGTAACTTACATTATGATTTTGGAGATTCAGATGATACTTAACATTTTTGCT
TCGGCTTTTTGCACTGTTGGAATGATTGTAAACAAGGATTTTCAGGCGATTTCGAGGGAG
GCAAGCCAATTTGAGCTAGGAAAAGCTAAATATTATTTGGTGCTAGTATGGAGTGCTATT
ATTTGGCAATTTTCGACACTAGGAATCGTTGGAGTAGTCCAATATGGTTCATCATTGCTG
TGTGGAATTTTAATTGCTTTGTTACTTCCACTCACAGAATTATTAGGTGTAATTTTATAT
CATGAAACATTTCAAGTTACAAAGGGTCTTGCTATATTCCTCTCTCTTTGGGGATTTGTT
TCATACTTCTATGGTGAAATGAAACAAAGCAAGAAGAAAGAGGAGAGTCCAATTCCCCAA
ACAGAAATGGTTCAAACCTCACCTCTGATCTCTTTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400003819
PEP Infomation

pacid=37475019 transcript=PGSC0003DMT400005467 locus=PGSC0003DMG400002132 ID=PGSC0003DMT400005467.v4.03 annot-version=v4.03
Sequence

MDNQSSKWRKFILVLNCIALGIGYCGGPVISRLYFLHGGQRIWLSSWLACIGWPIILIVL
IIAYFYRLKTQGSDINFLCITLQEFTSSAALGILVGLAGYLYTWGPAKLPVSTSTVIYAA
QLGFTVIFAFLIVKQKLTAYSVNAVVLLIVGAGTLALRAESDRPEGESTKQYVLGFVMTL
LAAASTGLALPLLELIYIRAKKNVTYIMILEIQMILNIFASAFCTVGMIVNKDFQAISRE
ASQFELGKAKYYLVLVWSAIIWQFSTLGIVGVVQYGSSLLCGILIALLLPLTELLGVILY
HETFQVTKGLAIFLSLWGFVSYFYGEMKQSKKKEESPIPQTEMVQTSPLISL*

Transcript Sequence

Transcript ID

PGSC0003DMT400005467
Transcript Infomation

pacid=37475019 locus=PGSC0003DMG400002132 ID=PGSC0003DMT400005467.v4.03 annot-version=v4.03
Sequence

ATGGATAATCAAAGCAGCAAATGGAGAAAATTTATACTTGTACTCAATTGTATCGCTCTT
GGCATAGGCTATTGTGGTGGTCCTGTAATCTCACGTCTCTATTTCCTCCACGGTGGCCAA
AGAATTTGGCTTTCGAGTTGGCTAGCATGCATTGGATGGCCAATTATTCTCATTGTTCTC
ATCATCGCTTATTTTTACCGTCTAAAAACTCAGGGCTCTGATATCAACTTTTTATGTATA
ACTCTTCAGGAGTTCACATCATCAGCCGCGTTAGGTATTCTAGTCGGCCTAGCTGGTTAT
CTTTACACGTGGGGACCCGCAAAACTCCCTGTTTCTACTTCAACCGTTATTTATGCAGCA
CAACTCGGATTTACCGTGATATTTGCTTTTCTTATAGTAAAGCAGAAATTGACTGCGTAT
TCGGTGAATGCGGTTGTTTTATTGATTGTTGGAGCGGGAACTTTAGCGCTACGAGCGGAG
AGTGATCGACCAGAAGGGGAGTCAACTAAACAATATGTTTTGGGGTTTGTAATGACACTT
TTGGCTGCTGCTTCAACAGGGCTTGCTCTGCCTCTACTTGAGTTGATTTACATCAGGGCT
AAAAAAAATGTAACTTACATTATGATTTTGGAGATTCAGATGATACTTAACATTTTTGCT
TCGGCTTTTTGCACTGTTGGAATGATTGTAAACAAGGATTTTCAGGCGATTTCGAGGGAG
GCAAGCCAATTTGAGCTAGGAAAAGCTAAATATTATTTGGTGCTAGTATGGAGTGCTATT
ATTTGGCAATTTTCGACACTAGGAATCGTTGGAGTAGTCCAATATGGTTCATCATTGCTG
TGTGGAATTTTAATTGCTTTGTTACTTCCACTCACAGAATTATTAGGTGTAATTTTATAT
CATGAAACATTTCAAGTTACAAAGGGTCTTGCTATATTCCTCTCTCTTTGGGGATTTGTT
TCATACTTCTATGGTGAAATGAAACAAAGCAAGAAGAAAGAGGAGAGTCCAATTCCCCAA
ACAGAAATGGTTCAAACCTCACCTCTGATCTCTTTGTAA