Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005349
CDS Infomation

pacid=37427171 polypeptide=PGSC0003DMP400003748 locus=PGSC0003DMG400002087 ID=PGSC0003DMT400005349.v4.03 annot-version=v4.03
Sequence

ATGACTTTTGCCAGTGGCAGTTTCACTCCAATCTTGACCAACAGTTTGATTGCTTCTCGA
TTATGGACCCCAAATTGGAGAAATGGGTTTTTCTCCCCTTTCAATATGGTGCACACATTT
GCCTCAACTCGTAGCCGTCTGCTCAAGAACAAGAATCACTACAAAAGATTGGCACTTTCT
TCCTGCAGTAGAAGCTTCAGCTGTCAGTCCACTGCTTTGTCTGATATCAGTTCAACTTCT
CACACTGTTTCCTCAAATGGCCACCTTAGATATGGACGCTTGATGCCATGCCCTTTGCAG
AACAGCCCACCTAGGGTTGAGCATCTTGTCGTCACAAAAGAAGGACCTGTTCTAGAATAT
ATTTGTAAAGCTTTGGATCTCCCTCCATTATATGTGGAAGACCTTATACAGTTTGGAGCT
GTGTATTACGCACTTGTATGTCCTAAGCCACCTCCGACTGCCAGTCCTGAGCAAATTAAA
GTGTATGAAGAAGTTACAGATCCATCAATTCTGAGACAGAGAACTTCAATCAAAGGGAAA
ACTGTACGTGAAGCTCAGAAAACTTTCAAAATAACTCGTGCTGATGAAATTGTTGAAGCT
GGAACGTATTTGCGAGTGCATGTACACCCTAAGCGCTTTCCGAGGTGCTATGACATTGAC
TGGAAATCTCGTATTATTGCTGTAACCGACGACTATGTGGTTCTGGATAAACCTGCTGGT
ACATCTGTAGGAGGAACTACAGATAACATTGAAGAAAGCTGTGCTACATTTGCTACTCGA
GCATTAGGATTTTCAGCTCCACTGCTTACTACCCATCAGATTGACAATTGCACTGAAGGA
TGTGTTGTGCTGGCTCGGAGCAAGGAGTACTGTTCAGTATTTCATGGAAAAATCAGGGAG
AAGAAGGTCAAAAAGCTTTATCTTGCTCTTGCTGCTGCTCCGGTTCCTATTGGAATACTT
ACACACTACATGCGTCCTATTAATATGGCCCCAAGACTTGTTTCTGAAGATTTTGTGAAA
GGATGGTTGTTATGCCAACTTGAGGTCTTAGAATGCAAAAAGGTACCGTGGCCTAGTAGT
GAAATCCAGAGGACATACAACCTTGAGGACTGTGGATGGGCTTTGAAAGACTTTGCATAT
GAGTGCCAAATCAACCTTCTAACTGGTCGGACTCATCAGATTCGAGCACAGTTAGCTGCA
TGTAGTGCGCCAGTGGTAGGTGACTCAATGTATATGCCAGCTGCAATTGCTGAAATAGTC
TGTCCCGGGAGTAATCCATTTGGGAAGAACAAAAAACTATATTCAAACGAAAATGATAAA
TCACTTGCAATAGACGAGTGGATAGCACAACATGGGAAGGAACCTAGTGTTGCTGTAGGT
CTTCAGGCATGCCAGATCTCGTGGGACGACGGCCAGCACTGTTATGGTGCCAGATTGCCC
TGGTGGAGGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400003748
PEP Infomation

pacid=37427171 transcript=PGSC0003DMT400005349 locus=PGSC0003DMG400002087 ID=PGSC0003DMT400005349.v4.03 annot-version=v4.03
Sequence

MTFASGSFTPILTNSLIASRLWTPNWRNGFFSPFNMVHTFASTRSRLLKNKNHYKRLALS
SCSRSFSCQSTALSDISSTSHTVSSNGHLRYGRLMPCPLQNSPPRVEHLVVTKEGPVLEY
ICKALDLPPLYVEDLIQFGAVYYALVCPKPPPTASPEQIKVYEEVTDPSILRQRTSIKGK
TVREAQKTFKITRADEIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTDDYVVLDKPAG
TSVGGTTDNIEESCATFATRALGFSAPLLTTHQIDNCTEGCVVLARSKEYCSVFHGKIRE
KKVKKLYLALAAAPVPIGILTHYMRPINMAPRLVSEDFVKGWLLCQLEVLECKKVPWPSS
EIQRTYNLEDCGWALKDFAYECQINLLTGRTHQIRAQLAACSAPVVGDSMYMPAAIAEIV
CPGSNPFGKNKKLYSNENDKSLAIDEWIAQHGKEPSVAVGLQACQISWDDGQHCYGARLP
WWR*

Transcript Sequence

Transcript ID

PGSC0003DMT400005349
Transcript Infomation

pacid=37427171 locus=PGSC0003DMG400002087 ID=PGSC0003DMT400005349.v4.03 annot-version=v4.03
Sequence

ATGACTTTTGCCAGTGGCAGTTTCACTCCAATCTTGACCAACAGTTTGATTGCTTCTCGA
TTATGGACCCCAAATTGGAGAAATGGGTTTTTCTCCCCTTTCAATATGGTGCACACATTT
GCCTCAACTCGTAGCCGTCTGCTCAAGAACAAGAATCACTACAAAAGATTGGCACTTTCT
TCCTGCAGTAGAAGCTTCAGCTGTCAGTCCACTGCTTTGTCTGATATCAGTTCAACTTCT
CACACTGTTTCCTCAAATGGCCACCTTAGATATGGACGCTTGATGCCATGCCCTTTGCAG
AACAGCCCACCTAGGGTTGAGCATCTTGTCGTCACAAAAGAAGGACCTGTTCTAGAATAT
ATTTGTAAAGCTTTGGATCTCCCTCCATTATATGTGGAAGACCTTATACAGTTTGGAGCT
GTGTATTACGCACTTGTATGTCCTAAGCCACCTCCGACTGCCAGTCCTGAGCAAATTAAA
GTGTATGAAGAAGTTACAGATCCATCAATTCTGAGACAGAGAACTTCAATCAAAGGGAAA
ACTGTACGTGAAGCTCAGAAAACTTTCAAAATAACTCGTGCTGATGAAATTGTTGAAGCT
GGAACGTATTTGCGAGTGCATGTACACCCTAAGCGCTTTCCGAGGTGCTATGACATTGAC
TGGAAATCTCGTATTATTGCTGTAACCGACGACTATGTGGTTCTGGATAAACCTGCTGGT
ACATCTGTAGGAGGAACTACAGATAACATTGAAGAAAGCTGTGCTACATTTGCTACTCGA
GCATTAGGATTTTCAGCTCCACTGCTTACTACCCATCAGATTGACAATTGCACTGAAGGA
TGTGTTGTGCTGGCTCGGAGCAAGGAGTACTGTTCAGTATTTCATGGAAAAATCAGGGAG
AAGAAGGTCAAAAAGCTTTATCTTGCTCTTGCTGCTGCTCCGGTTCCTATTGGAATACTT
ACACACTACATGCGTCCTATTAATATGGCCCCAAGACTTGTTTCTGAAGATTTTGTGAAA
GGATGGTTGTTATGCCAACTTGAGGTCTTAGAATGCAAAAAGGTACCGTGGCCTAGTAGT
GAAATCCAGAGGACATACAACCTTGAGGACTGTGGATGGGCTTTGAAAGACTTTGCATAT
GAGTGCCAAATCAACCTTCTAACTGGTCGGACTCATCAGATTCGAGCACAGTTAGCTGCA
TGTAGTGCGCCAGTGGTAGGTGACTCAATGTATATGCCAGCTGCAATTGCTGAAATAGTC
TGTCCCGGGAGTAATCCATTTGGGAAGAACAAAAAACTATATTCAAACGAAAATGATAAA
TCACTTGCAATAGACGAGTGGATAGCACAACATGGGAAGGAACCTAGTGTTGCTGTAGGT
CTTCAGGCATGCCAGATCTCGTGGGACGACGGCCAGCACTGTTATGGTGCCAGATTGCCC
TGGTGGAGGTAG