Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005277
CDS Infomation

pacid=37427260 polypeptide=PGSC0003DMP400003710 locus=PGSC0003DMG400002076 ID=PGSC0003DMT400005277.v4.03 annot-version=v4.03
Sequence

ATGTTTAATAGCCACCAGCACTTGCTCGACATATCGTCCTCAGCTCAACGAACACCTGAT
AACGAGTTGGACTTCATTCGTGATGAAGAGTTTGATAGCAACTCTGGTGCTGATAATATG
GAAGCTCCCAATTCAGGTGATGACGATCAAGCTGAACCAAACCAACCTCCAAACAAGAAG
AAGCGTTATCATCGCCACACTCAGCATCAGATTCAGGAAATGGAGTCCTTTTACAAGGAA
TGCAATCATCCAGATGACAAGCAAAGGAAGGAATTGGGAAGAAGACTCGGGTTGGAGCCA
TTACAAGTGAAATTTTGGTTCCAGAACAAGCGTACCCAGATGAAGGCTCAACATGAACGA
TGTGAGAACACACAGTTGAGGAATGAAAATGAGAAGCTTCGCTCTGAGAACATAAGGTAC
AAAGAAGCTTTGAGCAATGCAGCATGCCCAAACTGTGGAGGGCCAGCAGCTATTGGAGAG
ATGTCATTTGATGAGCATCAGTTGAGGATAGAAAATGCTCGTCTTAGAGATGAGATTGAC
AGGATAACTGGAATAGCTGGAAAATATGTTGGTAAATCAGGACTTGGCTTTTCTCATCAA
CTTCCTCTTCCTCCGCCCGAAGCTCCTCGGGCTCTGGATCTTGCTTTTGGGCCTCAATCG
GGCCTGCTTGGAGAAATGTACGCTGCTGGTGACCTTCTAAGAAATGCTGTTACGGGCCTT
ACAGATGCTGAGAAGCCCGTGGTCATTGAGCTTGCTGTTACTGCAATGGAGGAACTTATA
AGAATGGCACAAACTGAAGAGCCATTATGGATGCCAAGCTCAGGCATCATCTCTTCTGAG
ATTTTATGTGAGCAAGAATATGCTCGTATTTTTCCTCGAGGCATTGGCCCTAAGCCAGCT
ACACTCAATTCTGAAGCCTCACGAGAATCTGCTGTTGTTATTATGAATCATATCAATTTA
GTTGAGATTTTGATGGATGTGAACCAATGGACAACTGTTTTTGCTGGTCTAGTGTCAAAA
GCAATGACTCTTGAAGTCTTATCAACTGGCGTAGCAGGAAATTACAATGGAGCATTGCAA
GTGATGACAGCAGAGTTTCAAGTTCCATCTCCACTTGTTCCAACTCGGGAGAACTATTTC
GTAAGATATTGTAAACAACATGGTGAAGGGACTTGGGTAGTGGTTGATGTTTCCTTGGAC
AATTTGCGCCCTACATCAGTTCCGCGTTGCAGAAGAAGGCCATCTGGTTGTTTAATTAGA
GAAATGCCAAATGGTTACTCAAGGGTTATATGGGTTGAACACGTTGAGGTGGATGAAAAA
GCTGTCCATGACATCTACAAACCTCTTGTCAATTCAGGGATTGCGTTTGGAGCAAAACGC
TGGGTAGCAACTTTAGATAGACAATGTGAACGCCTTGCAAGTGTATTGGCGATTAACATC
CCAACAGGAGATGTTGGAATCATCACTTGTCCAGCTGGTCGAAAGAGTATGCTAAAACTT
GCTGAGAGAATGGTGATGAGCTTTTGTGCTGGAGTTGGTGCATCGACAACTCACATATGG
ACAACGTTGTCTGGAAGTGGTGCTGATGATGTGAGAGTCATGACTAGGAAGAGTATCGAT
GATCCAGGGAGACCTCCTGGTATTGTGCTGAGTGCTGCAACATCTTTTTGGCTGCCAGTT
TCTCCTAAGAGAGTGTTTGATTTTCTCCGGGATGAAAACTCTAGAAATGAGTGGGATATT
CTTTCAAATGGAGGGATTGTTCAAGAAATGGCACACATTGCAAATGGTCGTGATCCAGGA
AACTGTGTATCTCTACTCCGTGTCAATACTGGAACAAACTCTAACCAGAGTAACATGCTG
ATACTCCAAGAGAGCACAACTGATATAACAGGATCTTATGTTATTTACGCTCCAGTTGAT
ATTGCTGCAATGAATGTGGTGTTAGGTGGGGGTGACCCTGACTATGTTGCTCTGTTGCCA
TCTGGTTTTGCTATTCTTCCAGACGGACCGATGAATCATCATGGTGGAGGTAATTCAGAT
ATCGATTCTCCTGGTGGATCGCTACTAACTGTAGCATTTCAGATATTGGTTGATTCAGTC
CCAACTGCAAAGCTTTCCCTTGGCTCAGTTGCGACTGTTAATAGTCTCATCAAATGCACC
GTTGAAAAGATCAAAGGTGCTGTAACTTCTGCAAATGCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400003710
PEP Infomation

pacid=37427260 transcript=PGSC0003DMT400005277 locus=PGSC0003DMG400002076 ID=PGSC0003DMT400005277.v4.03 annot-version=v4.03
Sequence

MFNSHQHLLDISSSAQRTPDNELDFIRDEEFDSNSGADNMEAPNSGDDDQAEPNQPPNKK
KRYHRHTQHQIQEMESFYKECNHPDDKQRKELGRRLGLEPLQVKFWFQNKRTQMKAQHER
CENTQLRNENEKLRSENIRYKEALSNAACPNCGGPAAIGEMSFDEHQLRIENARLRDEID
RITGIAGKYVGKSGLGFSHQLPLPPPEAPRALDLAFGPQSGLLGEMYAAGDLLRNAVTGL
TDAEKPVVIELAVTAMEELIRMAQTEEPLWMPSSGIISSEILCEQEYARIFPRGIGPKPA
TLNSEASRESAVVIMNHINLVEILMDVNQWTTVFAGLVSKAMTLEVLSTGVAGNYNGALQ
VMTAEFQVPSPLVPTRENYFVRYCKQHGEGTWVVVDVSLDNLRPTSVPRCRRRPSGCLIR
EMPNGYSRVIWVEHVEVDEKAVHDIYKPLVNSGIAFGAKRWVATLDRQCERLASVLAINI
PTGDVGIITCPAGRKSMLKLAERMVMSFCAGVGASTTHIWTTLSGSGADDVRVMTRKSID
DPGRPPGIVLSAATSFWLPVSPKRVFDFLRDENSRNEWDILSNGGIVQEMAHIANGRDPG
NCVSLLRVNTGTNSNQSNMLILQESTTDITGSYVIYAPVDIAAMNVVLGGGDPDYVALLP
SGFAILPDGPMNHHGGGNSDIDSPGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCT
VEKIKGAVTSANA*

Transcript Sequence

Transcript ID

PGSC0003DMT400005277
Transcript Infomation

pacid=37427260 locus=PGSC0003DMG400002076 ID=PGSC0003DMT400005277.v4.03 annot-version=v4.03
Sequence

ATGTTTAATAGCCACCAGCACTTGCTCGACATATCGTCCTCAGCTCAACGAACACCTGAT
AACGAGTTGGACTTCATTCGTGATGAAGAGTTTGATAGCAACTCTGGTGCTGATAATATG
GAAGCTCCCAATTCAGGTGATGACGATCAAGCTGAACCAAACCAACCTCCAAACAAGAAG
AAGCGTTATCATCGCCACACTCAGCATCAGATTCAGGAAATGGAGTCCTTTTACAAGGAA
TGCAATCATCCAGATGACAAGCAAAGGAAGGAATTGGGAAGAAGACTCGGGTTGGAGCCA
TTACAAGTGAAATTTTGGTTCCAGAACAAGCGTACCCAGATGAAGGCTCAACATGAACGA
TGTGAGAACACACAGTTGAGGAATGAAAATGAGAAGCTTCGCTCTGAGAACATAAGGTAC
AAAGAAGCTTTGAGCAATGCAGCATGCCCAAACTGTGGAGGGCCAGCAGCTATTGGAGAG
ATGTCATTTGATGAGCATCAGTTGAGGATAGAAAATGCTCGTCTTAGAGATGAGATTGAC
AGGATAACTGGAATAGCTGGAAAATATGTTGGTAAATCAGGACTTGGCTTTTCTCATCAA
CTTCCTCTTCCTCCGCCCGAAGCTCCTCGGGCTCTGGATCTTGCTTTTGGGCCTCAATCG
GGCCTGCTTGGAGAAATGTACGCTGCTGGTGACCTTCTAAGAAATGCTGTTACGGGCCTT
ACAGATGCTGAGAAGCCCGTGGTCATTGAGCTTGCTGTTACTGCAATGGAGGAACTTATA
AGAATGGCACAAACTGAAGAGCCATTATGGATGCCAAGCTCAGGCATCATCTCTTCTGAG
ATTTTATGTGAGCAAGAATATGCTCGTATTTTTCCTCGAGGCATTGGCCCTAAGCCAGCT
ACACTCAATTCTGAAGCCTCACGAGAATCTGCTGTTGTTATTATGAATCATATCAATTTA
GTTGAGATTTTGATGGATGTGAACCAATGGACAACTGTTTTTGCTGGTCTAGTGTCAAAA
GCAATGACTCTTGAAGTCTTATCAACTGGCGTAGCAGGAAATTACAATGGAGCATTGCAA
GTGATGACAGCAGAGTTTCAAGTTCCATCTCCACTTGTTCCAACTCGGGAGAACTATTTC
GTAAGATATTGTAAACAACATGGTGAAGGGACTTGGGTAGTGGTTGATGTTTCCTTGGAC
AATTTGCGCCCTACATCAGTTCCGCGTTGCAGAAGAAGGCCATCTGGTTGTTTAATTAGA
GAAATGCCAAATGGTTACTCAAGGGTTATATGGGTTGAACACGTTGAGGTGGATGAAAAA
GCTGTCCATGACATCTACAAACCTCTTGTCAATTCAGGGATTGCGTTTGGAGCAAAACGC
TGGGTAGCAACTTTAGATAGACAATGTGAACGCCTTGCAAGTGTATTGGCGATTAACATC
CCAACAGGAGATGTTGGAATCATCACTTGTCCAGCTGGTCGAAAGAGTATGCTAAAACTT
GCTGAGAGAATGGTGATGAGCTTTTGTGCTGGAGTTGGTGCATCGACAACTCACATATGG
ACAACGTTGTCTGGAAGTGGTGCTGATGATGTGAGAGTCATGACTAGGAAGAGTATCGAT
GATCCAGGGAGACCTCCTGGTATTGTGCTGAGTGCTGCAACATCTTTTTGGCTGCCAGTT
TCTCCTAAGAGAGTGTTTGATTTTCTCCGGGATGAAAACTCTAGAAATGAGTGGGATATT
CTTTCAAATGGAGGGATTGTTCAAGAAATGGCACACATTGCAAATGGTCGTGATCCAGGA
AACTGTGTATCTCTACTCCGTGTCAATACTGGAACAAACTCTAACCAGAGTAACATGCTG
ATACTCCAAGAGAGCACAACTGATATAACAGGATCTTATGTTATTTACGCTCCAGTTGAT
ATTGCTGCAATGAATGTGGTGTTAGGTGGGGGTGACCCTGACTATGTTGCTCTGTTGCCA
TCTGGTTTTGCTATTCTTCCAGACGGACCGATGAATCATCATGGTGGAGGTAATTCAGAT
ATCGATTCTCCTGGTGGATCGCTACTAACTGTAGCATTTCAGATATTGGTTGATTCAGTC
CCAACTGCAAAGCTTTCCCTTGGCTCAGTTGCGACTGTTAATAGTCTCATCAAATGCACC
GTTGAAAAGATCAAAGGTGCTGTAACTTCTGCAAATGCATGA