Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005263
CDS Infomation

pacid=37427792 polypeptide=PGSC0003DMP400003702 locus=PGSC0003DMG400002071 ID=PGSC0003DMT400005263.v4.03 annot-version=v4.03
Sequence

ATGACCATTGCCTCTAGAGCTCTCTTTCTCTTCCAGAAATCAATCGCAATAGCAAGCACT
GTAACAACAACACAAAAGCCCCAAAGTTGGAGAATCCAATTCAAACAAACCCAATTAGTT
TCCCAAATTTCCTCTATTCTCTTGCAAAGACAAACAAATCAATGGCCTTCCCTTCTCAAG
AACCTCAAACTTTGTTCTTCACAATTTACTCCATCTCTCTTCCTTCAAATCCTCCACAAC
ACCCAAACCAACCCACAAGTCTCTCTACGCTTCTTCGACTATGCCAAGAACAATCTTGGG
TTCCAACCTGATGCCAAAGTTCTTTGTACACTTGTGTATATACTTCTCGGGTCCGGACTA
TCCAAACCCGCAAAACCCATCTTGGATACTCTCATTCAAACATACCCACCAGCCCAAATT
GTAGGTTTCTTGATTCAGTCACTGAAAGTTGGTGAAATTCACATTCAGTCTTCAGTCTTG
AGCTCAGTTCTTGAATGTTACTGCAATAAAGGTTTGTTCTTGGAAGCTCTTCAGGTTTAT
CAAATAGTTAGAGAATATGGCTATTTTGTATCTGTTAATTGTTGTAATACATTGCTTAAT
TTACTGCTCAGTAAGAATGAGTTAAGATTGGGCTGGTGTTATTTTGGTTCTATTATTCGT
AATGGGGTTCAGGAGAATGTGGTTACATGGTCTTTAATTGCTCAAATGCTTTGTAAAGAT
GGGAAATTTGAGCAAATTGTTCCTATTCTAGACAAGGGTGTATGCAGTCCTGTTATGTAT
AACATACTCATAGACTGTTACTCTGAGAGAGGGAACTTTGAAGCTGCATTTGGTTATTTA
AATGATATGTATAGTAAATGTATTGATCCCACCTTTAATACTTTTAGCTCAATTCTTGAT
GGTGCTTGCAAATATCAAAATGCCGAAGTGATTGAATCAGTGATGAGTTCCATGGTGGAA
AAAGGACATCTCCCGAAAGTTGTGTTACCTGACTATGATTCTGTGATTCGAAGGTTCTCT
GATATGGGAAAAGCATATGCAGCTGAATTGTTTTTCAGGGAAGCTTATGAAAAAAGGATT
AAGCTACAAGACAATACTTATGGCTCTATGCTAAGGGCATTCTCCAAGGAAGGTAAAGCT
GAAGATGCTATTTGGATGTACAACATTATAGTTGAGAGAAAAATATTCATCAGTGACAAA
TGCTATAGTGCCTTCATGAGTGTCCTATGCAATGAAAATCCATCACTGGAAGTTAGCAGT
TTGTTGAAAGACTTGATAGGAAGAGGATTCGTACCTCCCGTATCTCAAGTATCTAAATTT
ATAGTTTCTCAATGTGAAAAGCGTCAGTGGAAAGAAGCTGAGGAGCTTCTGAATGTAATT
TTTCAAAGAAGACTTCAGTTTGAATCTTTTTGTTGTTGCTCTTTGGTGCGGCACTATTGC
TTTAGCAGAAGGATTGATTCTGCCATTTCTTTACATACTGAACTAGAGAGACTTGGTGTT
GCTTTAGATGTAGAGACCTACGGTTTACTACTTGACAGTCTGTTTAAATCAAGACGGCGT
GAAGAAGCTCTAAAGATCTTCGATTACATGAGAACACATGATATGTTAAGCAGCGAAAGT
TTTTCAATCATGATTAGAGGGCTATGTCAGGAACAGGAGTTTAGAAAAGCAATGAGACTG
CATGATGATATGCTGAAATTGGGGTTTAAACCTGACAAAAAAGCATATAAGCGATTGATT
TCTGGGTTTGGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400003702
PEP Infomation

pacid=37427792 transcript=PGSC0003DMT400005263 locus=PGSC0003DMG400002071 ID=PGSC0003DMT400005263.v4.03 annot-version=v4.03
Sequence

MTIASRALFLFQKSIAIASTVTTTQKPQSWRIQFKQTQLVSQISSILLQRQTNQWPSLLK
NLKLCSSQFTPSLFLQILHNTQTNPQVSLRFFDYAKNNLGFQPDAKVLCTLVYILLGSGL
SKPAKPILDTLIQTYPPAQIVGFLIQSLKVGEIHIQSSVLSSVLECYCNKGLFLEALQVY
QIVREYGYFVSVNCCNTLLNLLLSKNELRLGWCYFGSIIRNGVQENVVTWSLIAQMLCKD
GKFEQIVPILDKGVCSPVMYNILIDCYSERGNFEAAFGYLNDMYSKCIDPTFNTFSSILD
GACKYQNAEVIESVMSSMVEKGHLPKVVLPDYDSVIRRFSDMGKAYAAELFFREAYEKRI
KLQDNTYGSMLRAFSKEGKAEDAIWMYNIIVERKIFISDKCYSAFMSVLCNENPSLEVSS
LLKDLIGRGFVPPVSQVSKFIVSQCEKRQWKEAEELLNVIFQRRLQFESFCCCSLVRHYC
FSRRIDSAISLHTELERLGVALDVETYGLLLDSLFKSRRREEALKIFDYMRTHDMLSSES
FSIMIRGLCQEQEFRKAMRLHDDMLKLGFKPDKKAYKRLISGFG*

Transcript Sequence

Transcript ID

PGSC0003DMT400005263
Transcript Infomation

pacid=37427792 locus=PGSC0003DMG400002071 ID=PGSC0003DMT400005263.v4.03 annot-version=v4.03
Sequence

ATGACCATTGCCTCTAGAGCTCTCTTTCTCTTCCAGAAATCAATCGCAATAGCAAGCACT
GTAACAACAACACAAAAGCCCCAAAGTTGGAGAATCCAATTCAAACAAACCCAATTAGTT
TCCCAAATTTCCTCTATTCTCTTGCAAAGACAAACAAATCAATGGCCTTCCCTTCTCAAG
AACCTCAAACTTTGTTCTTCACAATTTACTCCATCTCTCTTCCTTCAAATCCTCCACAAC
ACCCAAACCAACCCACAAGTCTCTCTACGCTTCTTCGACTATGCCAAGAACAATCTTGGG
TTCCAACCTGATGCCAAAGTTCTTTGTACACTTGTGTATATACTTCTCGGGTCCGGACTA
TCCAAACCCGCAAAACCCATCTTGGATACTCTCATTCAAACATACCCACCAGCCCAAATT
GTAGGTTTCTTGATTCAGTCACTGAAAGTTGGTGAAATTCACATTCAGTCTTCAGTCTTG
AGCTCAGTTCTTGAATGTTACTGCAATAAAGGTTTGTTCTTGGAAGCTCTTCAGGTTTAT
CAAATAGTTAGAGAATATGGCTATTTTGTATCTGTTAATTGTTGTAATACATTGCTTAAT
TTACTGCTCAGTAAGAATGAGTTAAGATTGGGCTGGTGTTATTTTGGTTCTATTATTCGT
AATGGGGTTCAGGAGAATGTGGTTACATGGTCTTTAATTGCTCAAATGCTTTGTAAAGAT
GGGAAATTTGAGCAAATTGTTCCTATTCTAGACAAGGGTGTATGCAGTCCTGTTATGTAT
AACATACTCATAGACTGTTACTCTGAGAGAGGGAACTTTGAAGCTGCATTTGGTTATTTA
AATGATATGTATAGTAAATGTATTGATCCCACCTTTAATACTTTTAGCTCAATTCTTGAT
GGTGCTTGCAAATATCAAAATGCCGAAGTGATTGAATCAGTGATGAGTTCCATGGTGGAA
AAAGGACATCTCCCGAAAGTTGTGTTACCTGACTATGATTCTGTGATTCGAAGGTTCTCT
GATATGGGAAAAGCATATGCAGCTGAATTGTTTTTCAGGGAAGCTTATGAAAAAAGGATT
AAGCTACAAGACAATACTTATGGCTCTATGCTAAGGGCATTCTCCAAGGAAGGTAAAGCT
GAAGATGCTATTTGGATGTACAACATTATAGTTGAGAGAAAAATATTCATCAGTGACAAA
TGCTATAGTGCCTTCATGAGTGTCCTATGCAATGAAAATCCATCACTGGAAGTTAGCAGT
TTGTTGAAAGACTTGATAGGAAGAGGATTCGTACCTCCCGTATCTCAAGTATCTAAATTT
ATAGTTTCTCAATGTGAAAAGCGTCAGTGGAAAGAAGCTGAGGAGCTTCTGAATGTAATT
TTTCAAAGAAGACTTCAGTTTGAATCTTTTTGTTGTTGCTCTTTGGTGCGGCACTATTGC
TTTAGCAGAAGGATTGATTCTGCCATTTCTTTACATACTGAACTAGAGAGACTTGGTGTT
GCTTTAGATGTAGAGACCTACGGTTTACTACTTGACAGTCTGTTTAAATCAAGACGGCGT
GAAGAAGCTCTAAAGATCTTCGATTACATGAGAACACATGATATGTTAAGCAGCGAAAGT
TTTTCAATCATGATTAGAGGGCTATGTCAGGAACAGGAGTTTAGAAAAGCAATGAGACTG
CATGATGATATGCTGAAATTGGGGTTTAAACCTGACAAAAAAGCATATAAGCGATTGATT
TCTGGGTTTGGCTAA