Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005252
CDS Infomation

pacid=37429152 polypeptide=PGSC0003DMP400003696 locus=PGSC0003DMG400002069 ID=PGSC0003DMT400005252.v4.03 annot-version=v4.03
Sequence

ATGGCGCGAAGAATAGCGATCCACTGGTTCGCGCTCACAGTTACTATCGTGCTCTCCCTT
CTCGTTCAGCCTTGTTTCTCCATATACTGTGACGAAGATGACTGTTACGATCTCCTTGGG
GTTACTCAAAATGCCAATTCTTCTGAAATCAAGAAAGCTTATTACAAGCTCTCTCTAAAA
CATCATCCAGATAAAAACCCTGATCCAGAATCAAAGAAGCTTTTTGTGAAAATTGCAAAT
GCTTATGAGATTTTGAAAAACGAAGCCACAAGGGAGCAGTATGATTATGCACTTGCCCAT
CCAGAGGAGTTTTTCTACAATACAGCACGGTATTACCATGCTTACTATGGTCACAAAACT
GATACCCGTGCTGTGCTCGTTGGTCTTCTTTTGATAGTCTCAATATTTCAGTATCTGAAT
CAGTGGACAAGATATAATCAGGCTATTGACATGGTCAAGAAAACACCAGCTTATAAAAAC
AAGCTACGTGCTTTGGAGCTTCAACGCACTGGAGGAATGGCTAATAGGAAGAAGGGCAAC
AAGCCGATGGACAAGAAGGTGGAAGAAGAACTTGGCAAGGAACTCAACTTGGATATAAAG
GGCACTGAAAAGCCTTCTGTTTGGGATCTAATTGGAATCCGTTTTATACTTCTTCCTTAC
ACTCTGGGAAAGCTGTTATTGTGGTATGGATGTTGGTTCTGGAGGTACAATGTCAAGCGT
GCTCCATACTCATGGGAAGATGCCTCCTATTTGACACGAAGGTCCCTTCGGGCTTCTCTT
GATTCATGGATATCTATTGACGAATCAACCAAGGAAGATCTTATTGAAAGACGACTTTGG
GAGAAGTCCAACTTTGAAAGCTATGTGGCTGAGATGCGCAAGGAATCAAAGCGCCGAAGA
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400003696
PEP Infomation

pacid=37429152 transcript=PGSC0003DMT400005252 locus=PGSC0003DMG400002069 ID=PGSC0003DMT400005252.v4.03 annot-version=v4.03
Sequence

MARRIAIHWFALTVTIVLSLLVQPCFSIYCDEDDCYDLLGVTQNANSSEIKKAYYKLSLK
HHPDKNPDPESKKLFVKIANAYEILKNEATREQYDYALAHPEEFFYNTARYYHAYYGHKT
DTRAVLVGLLLIVSIFQYLNQWTRYNQAIDMVKKTPAYKNKLRALELQRTGGMANRKKGN
KPMDKKVEEELGKELNLDIKGTEKPSVWDLIGIRFILLPYTLGKLLLWYGCWFWRYNVKR
APYSWEDASYLTRRSLRASLDSWISIDESTKEDLIERRLWEKSNFESYVAEMRKESKRRR
*

Transcript Sequence

Transcript ID

PGSC0003DMT400005252
Transcript Infomation

pacid=37429152 locus=PGSC0003DMG400002069 ID=PGSC0003DMT400005252.v4.03 annot-version=v4.03
Sequence

ATGGCGCGAAGAATAGCGATCCACTGGTTCGCGCTCACAGTTACTATCGTGCTCTCCCTT
CTCGTTCAGCCTTGTTTCTCCATATACTGTGACGAAGATGACTGTTACGATCTCCTTGGG
GTTACTCAAAATGCCAATTCTTCTGAAATCAAGAAAGCTTATTACAAGCTCTCTCTAAAA
CATCATCCAGATAAAAACCCTGATCCAGAATCAAAGAAGCTTTTTGTGAAAATTGCAAAT
GCTTATGAGATTTTGAAAAACGAAGCCACAAGGGAGCAGTATGATTATGCACTTGCCCAT
CCAGAGGAGTTTTTCTACAATACAGCACGGTATTACCATGCTTACTATGGTCACAAAACT
GATACCCGTGCTGTGCTCGTTGGTCTTCTTTTGATAGTCTCAATATTTCAGTATCTGAAT
CAGTGGACAAGATATAATCAGGCTATTGACATGGTCAAGAAAACACCAGCTTATAAAAAC
AAGCTACGTGCTTTGGAGCTTCAACGCACTGGAGGAATGGCTAATAGGAAGAAGGGCAAC
AAGCCGATGGACAAGAAGGTGGAAGAAGAACTTGGCAAGGAACTCAACTTGGATATAAAG
GGCACTGAAAAGCCTTCTGTTTGGGATCTAATTGGAATCCGTTTTATACTTCTTCCTTAC
ACTCTGGGAAAGCTGTTATTGTGGTATGGATGTTGGTTCTGGAGGTACAATGTCAAGCGT
GCTCCATACTCATGGGAAGATGCCTCCTATTTGACACGAAGGTCCCTTCGGGCTTCTCTT
GATTCATGGATATCTATTGACGAATCAACCAAGGAAGATCTTATTGAAAGACGACTTTGG
GAGAAGTCCAACTTTGAAAGCTATGTGGCTGAGATGCGCAAGGAATCAAAGCGCCGAAGA
TAA