Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005186
CDS Infomation

pacid=37445861 polypeptide=PGSC0003DMP400003665 locus=PGSC0003DMG400002049 ID=PGSC0003DMT400005186.v4.03 annot-version=v4.03
Sequence

ATGGATCACGTCGAGAAATTAATCTCCGACGTGAAATTATCGTCCGTCGTGCCGGGGAGG
ATCACCGGCGACGACAAACTTCAGCATGAATTTACCAACATGGACTTAATCATGAAGCTT
CATTACATTAAAGCTCTTTATTTTTTCAAAAATGATGCTGTTGAAGGTTTGCATATTCAT
GACCTAAAACTTCCCATGTTTAACCTTCTTGAACTTTATTACCCAACTTCCGGCAGAATT
AGGCGGTGCGACGACGGTGATGGTGGTGGTGGCCGGCCGTTCATAAAGTGTAATGACGGT
GGTGTTAGAATTGTTGAAGCAAAATGTAAAAATAAAACAATTGATGAGTGGCTTGCTATG
AATGATAATGATCATGATGAGGAGCTTGTTTATGATCAACTTCTTGGTCCTGAGTTGGGA
TTTTCACCTCTTGTTTTCATACAGTTCACTTGGTTCAAATGTGGAGGGATGTCAATTGGG
CTAAGTTGGGCTCATATACTTGGAGATTCATTTTCAGCTTCAAATTTCCTCAACATGTGG
GCAAAAATCATGGTTGGTCAACTAATTTCACCTCAATTTCTTCACAAGTCAACAAACACC
AACAAATTGATCAATAATAATCCAATATTATTATCTATTGTTGGAAAGTTGCCATTTTCT
CTAAAGAGAGTTGATCCAGTTGGTGATCATTGGAAAATCACCGACACTATCAAAATGCAA
TCACATTCTTTCCATATCACACAAAAGCAACTAAACCAACTAATTTCCAAGGTTTGTGGA
ACTTATAAAGTGAAGCCTTTTGATGTTATTTGTGCTACAATGTGGAAAATGTTGGCTAAG
GTAAGGGGAGAATATTCATCAGAGCCCGCGATTGTGACAATTATACGTGGGGATGACAAT
GAAACAACTGAAGTCATGTCAAGCAACAATCAAGTGATTATCAGCATAGTTGAAGCAGAT
GACGTTAAAGTTTCTGAGGCTGATACTTCAGAACTGACAGAGTTGATAGCTGAAAAGACT
GTGGACGAGACTAGAGTTGTTGAAGAACTAATGGAAAAAGAAAATGGCATTCCGGACTTT
ATTGTGTATGGGGCAAATCTCACATTTGTGAATCTTGAAGAGGCAAAGATTTATGATTTG
GAACTTAGGGGTAAACAACCAATATTTGCAAGTTATAACATAAGTGGAGTTGGTGATGAA
GGTGTTATTTTGGTATTACCAAGGCTTGAAGGTGGAAGGATAGTGAATTTGGTTTTGCCT
CAAAAACAAATTGAAGGTTTGAAAAATAAGATGAGAGAGGAATTAGGTGTTTTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400003665
PEP Infomation

pacid=37445861 transcript=PGSC0003DMT400005186 locus=PGSC0003DMG400002049 ID=PGSC0003DMT400005186.v4.03 annot-version=v4.03
Sequence

MDHVEKLISDVKLSSVVPGRITGDDKLQHEFTNMDLIMKLHYIKALYFFKNDAVEGLHIH
DLKLPMFNLLELYYPTSGRIRRCDDGDGGGGRPFIKCNDGGVRIVEAKCKNKTIDEWLAM
NDNDHDEELVYDQLLGPELGFSPLVFIQFTWFKCGGMSIGLSWAHILGDSFSASNFLNMW
AKIMVGQLISPQFLHKSTNTNKLINNNPILLSIVGKLPFSLKRVDPVGDHWKITDTIKMQ
SHSFHITQKQLNQLISKVCGTYKVKPFDVICATMWKMLAKVRGEYSSEPAIVTIIRGDDN
ETTEVMSSNNQVIISIVEADDVKVSEADTSELTELIAEKTVDETRVVEELMEKENGIPDF
IVYGANLTFVNLEEAKIYDLELRGKQPIFASYNISGVGDEGVILVLPRLEGGRIVNLVLP
QKQIEGLKNKMREELGVF*

Transcript Sequence

Transcript ID

PGSC0003DMT400005186
Transcript Infomation

pacid=37445861 locus=PGSC0003DMG400002049 ID=PGSC0003DMT400005186.v4.03 annot-version=v4.03
Sequence

ATGGATCACGTCGAGAAATTAATCTCCGACGTGAAATTATCGTCCGTCGTGCCGGGGAGG
ATCACCGGCGACGACAAACTTCAGCATGAATTTACCAACATGGACTTAATCATGAAGCTT
CATTACATTAAAGCTCTTTATTTTTTCAAAAATGATGCTGTTGAAGGTTTGCATATTCAT
GACCTAAAACTTCCCATGTTTAACCTTCTTGAACTTTATTACCCAACTTCCGGCAGAATT
AGGCGGTGCGACGACGGTGATGGTGGTGGTGGCCGGCCGTTCATAAAGTGTAATGACGGT
GGTGTTAGAATTGTTGAAGCAAAATGTAAAAATAAAACAATTGATGAGTGGCTTGCTATG
AATGATAATGATCATGATGAGGAGCTTGTTTATGATCAACTTCTTGGTCCTGAGTTGGGA
TTTTCACCTCTTGTTTTCATACAGTTCACTTGGTTCAAATGTGGAGGGATGTCAATTGGG
CTAAGTTGGGCTCATATACTTGGAGATTCATTTTCAGCTTCAAATTTCCTCAACATGTGG
GCAAAAATCATGGTTGGTCAACTAATTTCACCTCAATTTCTTCACAAGTCAACAAACACC
AACAAATTGATCAATAATAATCCAATATTATTATCTATTGTTGGAAAGTTGCCATTTTCT
CTAAAGAGAGTTGATCCAGTTGGTGATCATTGGAAAATCACCGACACTATCAAAATGCAA
TCACATTCTTTCCATATCACACAAAAGCAACTAAACCAACTAATTTCCAAGGTTTGTGGA
ACTTATAAAGTGAAGCCTTTTGATGTTATTTGTGCTACAATGTGGAAAATGTTGGCTAAG
GTAAGGGGAGAATATTCATCAGAGCCCGCGATTGTGACAATTATACGTGGGGATGACAAT
GAAACAACTGAAGTCATGTCAAGCAACAATCAAGTGATTATCAGCATAGTTGAAGCAGAT
GACGTTAAAGTTTCTGAGGCTGATACTTCAGAACTGACAGAGTTGATAGCTGAAAAGACT
GTGGACGAGACTAGAGTTGTTGAAGAACTAATGGAAAAAGAAAATGGCATTCCGGACTTT
ATTGTGTATGGGGCAAATCTCACATTTGTGAATCTTGAAGAGGCAAAGATTTATGATTTG
GAACTTAGGGGTAAACAACCAATATTTGCAAGTTATAACATAAGTGGAGTTGGTGATGAA
GGTGTTATTTTGGTATTACCAAGGCTTGAAGGTGGAAGGATAGTGAATTTGGTTTTGCCT
CAAAAACAAATTGAAGGTTTGAAAAATAAGATGAGAGAGGAATTAGGTGTTTTTTGA