Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005156
CDS Infomation

pacid=37448349 polypeptide=PGSC0003DMP400003650 locus=PGSC0003DMG400002038 ID=PGSC0003DMT400005156.v4.03 annot-version=v4.03
Sequence

ATGGCTGCCCTGCTCCTCCTGCTTCTGCTAATCTGCAGCACCCCTGCAGTACTTTCTGCT
CGTCGTTGTGCTGATTGTGGATCTTCTCCTGTTCCTTACCCACTCAGTACCGGCCCAGAT
TGCGGTGACCAATCTTACAAAATACGGTGCAGTAGCAACATCCAACCCGAACTTTTCTTC
GATACGCTGAACAATTCATATCCGATAAGTTCAATATCTCCCGAATCACAAAGACTTACT
ATCGAACCATCACCGTTTTTATCCAACACCTGCATCACCCAGGACATTTCTACCGTAGGT
GTTCAATTGAATTCTTCTCTTCCTTTCAACATTACGAGCAGCAACACAATCATGTACTTA
AACTGTACTCAGACTTTGCTTTCGACTCTGCTTAATTGCTCCTCAGAGAGTTTGTGTCAT
ACTTACGTGAATGGAAGTTCTGGAAATGGAGATGGTGTTGGCGCGTGTAGGAACGCGCCG
ATTTGTTGTACGTTTGGGGCAGGTGGATCGTCGACGGCGTATATGATTCGGGTTAGGGAA
TCGGGTTGTCGGGCTTACCGGAGTTTTGTGAATTTGGATCCGTCGTTACCGGTTAGTAGA
TGGCCGGAAGCCGGGATGGAATTGCAGTGGGTTTCACCACCGGAGCCGGTTTGTACGGGT
CAGTCCGATTGTGATTCTGATTCGACCTGTGGACCCGACCCGAATTTGAATGGAGGTGTT
AACAGATGTTTTTGTCATTCCGGGTTTCATTGGGACCCAATTGCCGCGTTATGTGCCCAA
GATGTGACATGCCAAGATCGTGACGGTTGTGGTAGCGACCACACTGCACTCATAGCAGGT
TTGACATCAGGCCTGGGTGTGGCGGTGATTGCTGCTGTAATTGGTTTTTTTGTGTACAGA
CGTCACAAACGAATTAAGGAAGCACGAGATCGACTAACTCGAGAACGGGAAGATATTCTA
AGCTCTGGTGGTGTTAAATCTGCGAAGCTATTTACAGGCAAAGAAATCAAGAAAGCAACA
AACAATTTCTCTACGGACCGCCTTCTTGGTGCTGGAGGTTATGGTGAAGTTTACTATGGT
AAGCTTGATGATGGTACTGTGGTTGCTGTTAAATGTGCCAAGCTAGGGAATACTAAGGGC
ATTGAGCAAGTTCTCAATGAGGTCAGAATACTCTGTCAGGTTAACCACAAGAACCTTGTG
CGCATTCTAGGTTGTTGTGTTGAGCTTGAACAGCCATTGCTAGTTTATGAGTATGTCCCG
AATGGAACTGTAAGTGATCACTTGTATTTGCAACGCAAACTTCTAACATGGGATTGCCGA
CTCAGTATTGCTCATGCAACTGCAGAGGGACTTGCTTACTTGCATTTCTCTGCAGTTCCT
CCTATTTACCATCGGGATGTCAAGTCTAGCAACATTTTGCTCGATGACAAGTTGAATGCT
AAGGTCGCAGACTTTGGTCTTTCACGGTTGGCACATACAGACCTGAGTCATGTGTCCACC
TGTGCTCAGGGTACCCTTGGTTATCTTGACCCTGAGTACTACAGGAACTACCAATTGACA
GACAAGAGTGATGTGTACAGTTTCGGGGTTGTGTTGTTGGAACTCTTGACATCCCAAAAG
GCAATAGACTTTGGTCGACCACAGGATGATGTAAACTTGGCTATTTACGTGCAAAGGTTG
GTAGAGGAAGAGAGAATAATGGATGCTGTTGATCCTGCATTAAAGGAGGGAGCAAGCAGG
GTGGAGTTGGAGACAATGAAGGCACTCGGTTTTCTGGCTGTCAGTTGCTTGGAGGAAAGA
AGACAAAGCAGGCCTTCGATGAAAGAAGTAGCCGAGGAGATTGAGTACATAATCACTATT
GCTACTGCCAAAGCAATAGAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400003650
PEP Infomation

pacid=37448349 transcript=PGSC0003DMT400005156 locus=PGSC0003DMG400002038 ID=PGSC0003DMT400005156.v4.03 annot-version=v4.03
Sequence

MAALLLLLLLICSTPAVLSARRCADCGSSPVPYPLSTGPDCGDQSYKIRCSSNIQPELFF
DTLNNSYPISSISPESQRLTIEPSPFLSNTCITQDISTVGVQLNSSLPFNITSSNTIMYL
NCTQTLLSTLLNCSSESLCHTYVNGSSGNGDGVGACRNAPICCTFGAGGSSTAYMIRVRE
SGCRAYRSFVNLDPSLPVSRWPEAGMELQWVSPPEPVCTGQSDCDSDSTCGPDPNLNGGV
NRCFCHSGFHWDPIAALCAQDVTCQDRDGCGSDHTALIAGLTSGLGVAVIAAVIGFFVYR
RHKRIKEARDRLTREREDILSSGGVKSAKLFTGKEIKKATNNFSTDRLLGAGGYGEVYYG
KLDDGTVVAVKCAKLGNTKGIEQVLNEVRILCQVNHKNLVRILGCCVELEQPLLVYEYVP
NGTVSDHLYLQRKLLTWDCRLSIAHATAEGLAYLHFSAVPPIYHRDVKSSNILLDDKLNA
KVADFGLSRLAHTDLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSFGVVLLELLTSQK
AIDFGRPQDDVNLAIYVQRLVEEERIMDAVDPALKEGASRVELETMKALGFLAVSCLEER
RQSRPSMKEVAEEIEYIITIATAKAIE*

Transcript Sequence

Transcript ID

PGSC0003DMT400005156
Transcript Infomation

pacid=37448349 locus=PGSC0003DMG400002038 ID=PGSC0003DMT400005156.v4.03 annot-version=v4.03
Sequence

ATGGCTGCCCTGCTCCTCCTGCTTCTGCTAATCTGCAGCACCCCTGCAGTACTTTCTGCT
CGTCGTTGTGCTGATTGTGGATCTTCTCCTGTTCCTTACCCACTCAGTACCGGCCCAGAT
TGCGGTGACCAATCTTACAAAATACGGTGCAGTAGCAACATCCAACCCGAACTTTTCTTC
GATACGCTGAACAATTCATATCCGATAAGTTCAATATCTCCCGAATCACAAAGACTTACT
ATCGAACCATCACCGTTTTTATCCAACACCTGCATCACCCAGGACATTTCTACCGTAGGT
GTTCAATTGAATTCTTCTCTTCCTTTCAACATTACGAGCAGCAACACAATCATGTACTTA
AACTGTACTCAGACTTTGCTTTCGACTCTGCTTAATTGCTCCTCAGAGAGTTTGTGTCAT
ACTTACGTGAATGGAAGTTCTGGAAATGGAGATGGTGTTGGCGCGTGTAGGAACGCGCCG
ATTTGTTGTACGTTTGGGGCAGGTGGATCGTCGACGGCGTATATGATTCGGGTTAGGGAA
TCGGGTTGTCGGGCTTACCGGAGTTTTGTGAATTTGGATCCGTCGTTACCGGTTAGTAGA
TGGCCGGAAGCCGGGATGGAATTGCAGTGGGTTTCACCACCGGAGCCGGTTTGTACGGGT
CAGTCCGATTGTGATTCTGATTCGACCTGTGGACCCGACCCGAATTTGAATGGAGGTGTT
AACAGATGTTTTTGTCATTCCGGGTTTCATTGGGACCCAATTGCCGCGTTATGTGCCCAA
GATGTGACATGCCAAGATCGTGACGGTTGTGGTAGCGACCACACTGCACTCATAGCAGGT
TTGACATCAGGCCTGGGTGTGGCGGTGATTGCTGCTGTAATTGGTTTTTTTGTGTACAGA
CGTCACAAACGAATTAAGGAAGCACGAGATCGACTAACTCGAGAACGGGAAGATATTCTA
AGCTCTGGTGGTGTTAAATCTGCGAAGCTATTTACAGGCAAAGAAATCAAGAAAGCAACA
AACAATTTCTCTACGGACCGCCTTCTTGGTGCTGGAGGTTATGGTGAAGTTTACTATGGT
AAGCTTGATGATGGTACTGTGGTTGCTGTTAAATGTGCCAAGCTAGGGAATACTAAGGGC
ATTGAGCAAGTTCTCAATGAGGTCAGAATACTCTGTCAGGTTAACCACAAGAACCTTGTG
CGCATTCTAGGTTGTTGTGTTGAGCTTGAACAGCCATTGCTAGTTTATGAGTATGTCCCG
AATGGAACTGTAAGTGATCACTTGTATTTGCAACGCAAACTTCTAACATGGGATTGCCGA
CTCAGTATTGCTCATGCAACTGCAGAGGGACTTGCTTACTTGCATTTCTCTGCAGTTCCT
CCTATTTACCATCGGGATGTCAAGTCTAGCAACATTTTGCTCGATGACAAGTTGAATGCT
AAGGTCGCAGACTTTGGTCTTTCACGGTTGGCACATACAGACCTGAGTCATGTGTCCACC
TGTGCTCAGGGTACCCTTGGTTATCTTGACCCTGAGTACTACAGGAACTACCAATTGACA
GACAAGAGTGATGTGTACAGTTTCGGGGTTGTGTTGTTGGAACTCTTGACATCCCAAAAG
GCAATAGACTTTGGTCGACCACAGGATGATGTAAACTTGGCTATTTACGTGCAAAGGTTG
GTAGAGGAAGAGAGAATAATGGATGCTGTTGATCCTGCATTAAAGGAGGGAGCAAGCAGG
GTGGAGTTGGAGACAATGAAGGCACTCGGTTTTCTGGCTGTCAGTTGCTTGGAGGAAAGA
AGACAAAGCAGGCCTTCGATGAAAGAAGTAGCCGAGGAGATTGAGTACATAATCACTATT
GCTACTGCCAAAGCAATAGAATGA