Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005133
CDS Infomation

pacid=37457788 polypeptide=PGSC0003DMP400003633 locus=PGSC0003DMG400002026 ID=PGSC0003DMT400005133.v4.03 annot-version=v4.03
Sequence

ATGGATACTCCGAAATCGAATCATCAAAGAAGAAGGAGTTCTTCTCCTTTCTTGATGTCT
CAAACACTATGGTCATCAACTGAAAAAACATGCAGATCAGGATTGACCAGATCAAATGAT
GAAAAAGGGGTAAATGTGAAAGTTGTTCTGCGTTGCAGGCCTCCAAATGAGGATGAAATG
AAGATGAAAGGCCCTTTGGTGATCTCATGCGACGAGCTGAAACAAGAAGTCACTGCAACT
TTGAACACAAGTAATAAGCAAATAAACAAAGCATTTCTTTTTGACAAGGTTTGTGGTCCA
TCATCTCAGCAAAAGGACTTTTATGATCAGTCTGTGGCTCCTCTTGTTAATGAGGCTCTT
GAAGGATATACTTGTACTATTTTTGCTTATGGACAAACTGGAACAGGAAAAACTTACACA
ATGGAAGGGGAAGCAATTAAAGAGAAGAATGGGGAGTTTCACAAGAATGCTGGAGTAATA
CCTAGAGCAGTCCAAGAGATTTTTGACATTTTGGAGTCTCAAAAGGCTGAGTACACTATG
AAAGTTGCATATATAGAGATTTATAATGAGGAGATAACAGATCTTCTTTCCCTGGACGAG
GAATCAAAACCGATAGATGAGAAGCAGAGAAAGCCATTAGCTCTTATGGAGGATGGAAAA
GGTGCAGTTTTCATTAGAGGTCTAGAAGAGGTGACAGTATCAACTGCAGATGAAATATAC
AAAATTTTGGAGAAAGGATCTGTGAATAAGCATACAGCTGAGACGCTTCTTAATAAACAA
AGCAATAGGTCTCATTCGATATTTTCCATCACCTTACATGTTAAGGAATGTACTCATGAG
GGACTAGAACTGATTAAGTGTGGAAAACTGAATCTTGTTGACCTAGCTGGATCCGAGAAC
ATTTTACGTTCTGGTGCAAAAGAGGGAAGAGCAAGAGAGGCAGGGGAGATAAATAAGAGC
TTGCTTACCTTGGGCAGGGTCATCAATGCTTTGGTTGATCACTCTGGACATGTTCCATAC
AGGGATAGCAAGTTGACAAGGTTTCTGAGGGATTCGTTAGGAGGAAAAACAAAGACATGC
ATAATTGCCACAGTTTCACCATCCATCCAGTGCTTGGAAGAGACTCTCAGTACTCTCGAA
TATGCTAATCGTGCCAAGCAAATTAAAAACAGGCCAGAGGTTAACCAGAAGCTGACAAAA
TCTGCCCTAATCAAAGATTTGTATGTGGAGATGGACTGCCTAAAGCAAGAATTACATGCA
ACGAGGGAGAAGAATGGAATCTACATACCACAAGATCGTTTCCTGAGTGAAGAAGCAGCT
CATAAGGCGATAGTTGGGAAACTGAAGTTCACAGAACTTGATTTAGAGTCCAAAAACAAG
AAACTGATAGAAGTTCAGGATCTTTACGATAATCAGCGACAACTGACAGCAGATTTAACC
GAACAACTTGAGAGAACTCAGAGAGAACTAAAGAAAGCTGAACAAGCTTTCAATGATCTA
GAAGCTCAAAACAGGCGAGTGAAAGAAATGATTCAAGAGAAGGATTCTCTAGTATCCGAT
GTCATTAAATCTGAAAAGGAAATGACTGATAAAGCACTTGAGCTTCGAGATGAAGTAGAG
AATGCAGAATCAGAGATATCCAGCTTGTTCGCCAAAATTGAAAAAGGCAATAGTAGAGAG
GAAAGAAACAGAATCCTTGTGCAAAGCTTCCGCAGCAAATTATCTCAGCAGCTTGAAATT
TTAAAGAGAAAAACAGCAATTTCTGTAACCAAACAAGAGCAGCAATTGAATGTAATACTA
GAAGATACACAATCCTTCTTAGCTAATAAAAGAAGGGCTACAGATGAATTGAAGGTTCAG
CTCCAGAAGCTGAAAGACAAGTATAACTCCGATATCCAGAATTTAGCTGTTCCAGTCCAA
GATCTTCATGAAAATTCTCAGTTAGCTTTTAGCAAAGTGAATTCAGAAATATCAAAGCAT
TCTTCTGCTTTTACGGATCTTGTTGGAAAGATTTCCGCAGATGTTAATGCTATACTCAAC
GGTCTGCAAGGTAATATTCGGGAACTTGAGGTGAAGATAAATGCATTTGTGCGACAAGAA
CAACAGTATCAAACAAGAAGATATCATGAAATTCAAATTAGCTCTGAAGTTCTCCTCAAC
TTTTTCAAGACCTTGAATACATATATTTCAAAATTGAGACTAATGGATGAAAAATCACAA
ACAATTAATAATCAGCAACTCTTCACCCTTGAAGATAAGTTTGAGGAGCTGGCTGCAAGT
GAAGAACGTCAACTTATAGAAAAAGTTGCAGAGCTTATATTAGCTTCCAGTACTAAGAAG
AAAAGGCTGGTTCAAACAGCAGTCAATGACCTTAGAGAGTGCTCTACTATCAAAACCAGA
AATCTAAATGCTGAGTTTTCAGACATACAAGGTTGTGCTAATTCTGCCTATGAAGAGTGG
ACAAACTACATTGAAAGCACAGAATCCCACCATATCGAGGATTCAACTAGATTGGAATTT
TGGAAGAGTAGCCTAGCAGGAAACATCGATTGCTGTTTGACAAAATCAGAGGGGATCGAA
GATGGATGGAGAAATGCCCAAGAATCCCTTCATTCCCAAGAAACAAGAACCATCAACTCA
ATCGATTGCATTGTTAAGAGTGCTATGGAATCAAATGGAAAGATCGGCACTCAGTTTTCC
TCCACAGTGACTTCCATACTAGAAGAAACAGCTATTTCCAAGAGGAATCTTCTTTTTGTT
ATGGAAAGTTTGCTGAAACTTGATCATGATGAATGTGAGAAGATCTGTTCATCTATTCAT
CCTTGTGTTGAGGATATGAAACAGATGAAAGACAGACATTCATCCGAAGTATCAGAGATA
GCGGAAAATGCAGGAGAAGTATTGACAGATGAGTATAAGGTTGATGAACCGTCAAGCTCA
ACTCTGAGGAGGAAAAGAGTTAACGTGCCAAGTAAGGAATCTATTGAAAATCTCAGAACT
CCTTTTCTCGAGGAGTCACTCAAATCATTTCAAGGCAATGGAATAGCAAACCGAGCTAGC
AGAAATGTAAATGCAACCAAAAGTGGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400003633
PEP Infomation

pacid=37457788 transcript=PGSC0003DMT400005133 locus=PGSC0003DMG400002026 ID=PGSC0003DMT400005133.v4.03 annot-version=v4.03
Sequence

MDTPKSNHQRRRSSSPFLMSQTLWSSTEKTCRSGLTRSNDEKGVNVKVVLRCRPPNEDEM
KMKGPLVISCDELKQEVTATLNTSNKQINKAFLFDKVCGPSSQQKDFYDQSVAPLVNEAL
EGYTCTIFAYGQTGTGKTYTMEGEAIKEKNGEFHKNAGVIPRAVQEIFDILESQKAEYTM
KVAYIEIYNEEITDLLSLDEESKPIDEKQRKPLALMEDGKGAVFIRGLEEVTVSTADEIY
KILEKGSVNKHTAETLLNKQSNRSHSIFSITLHVKECTHEGLELIKCGKLNLVDLAGSEN
ILRSGAKEGRAREAGEINKSLLTLGRVINALVDHSGHVPYRDSKLTRFLRDSLGGKTKTC
IIATVSPSIQCLEETLSTLEYANRAKQIKNRPEVNQKLTKSALIKDLYVEMDCLKQELHA
TREKNGIYIPQDRFLSEEAAHKAIVGKLKFTELDLESKNKKLIEVQDLYDNQRQLTADLT
EQLERTQRELKKAEQAFNDLEAQNRRVKEMIQEKDSLVSDVIKSEKEMTDKALELRDEVE
NAESEISSLFAKIEKGNSREERNRILVQSFRSKLSQQLEILKRKTAISVTKQEQQLNVIL
EDTQSFLANKRRATDELKVQLQKLKDKYNSDIQNLAVPVQDLHENSQLAFSKVNSEISKH
SSAFTDLVGKISADVNAILNGLQGNIRELEVKINAFVRQEQQYQTRRYHEIQISSEVLLN
FFKTLNTYISKLRLMDEKSQTINNQQLFTLEDKFEELAASEERQLIEKVAELILASSTKK
KRLVQTAVNDLRECSTIKTRNLNAEFSDIQGCANSAYEEWTNYIESTESHHIEDSTRLEF
WKSSLAGNIDCCLTKSEGIEDGWRNAQESLHSQETRTINSIDCIVKSAMESNGKIGTQFS
STVTSILEETAISKRNLLFVMESLLKLDHDECEKICSSIHPCVEDMKQMKDRHSSEVSEI
AENAGEVLTDEYKVDEPSSSTLRRKRVNVPSKESIENLRTPFLEESLKSFQGNGIANRAS
RNVNATKSG*

Transcript Sequence

Transcript ID

PGSC0003DMT400005133
Transcript Infomation

pacid=37457788 locus=PGSC0003DMG400002026 ID=PGSC0003DMT400005133.v4.03 annot-version=v4.03
Sequence

ATGGATACTCCGAAATCGAATCATCAAAGAAGAAGGAGTTCTTCTCCTTTCTTGATGTCT
CAAACACTATGGTCATCAACTGAAAAAACATGCAGATCAGGATTGACCAGATCAAATGAT
GAAAAAGGGGTAAATGTGAAAGTTGTTCTGCGTTGCAGGCCTCCAAATGAGGATGAAATG
AAGATGAAAGGCCCTTTGGTGATCTCATGCGACGAGCTGAAACAAGAAGTCACTGCAACT
TTGAACACAAGTAATAAGCAAATAAACAAAGCATTTCTTTTTGACAAGGTTTGTGGTCCA
TCATCTCAGCAAAAGGACTTTTATGATCAGTCTGTGGCTCCTCTTGTTAATGAGGCTCTT
GAAGGATATACTTGTACTATTTTTGCTTATGGACAAACTGGAACAGGAAAAACTTACACA
ATGGAAGGGGAAGCAATTAAAGAGAAGAATGGGGAGTTTCACAAGAATGCTGGAGTAATA
CCTAGAGCAGTCCAAGAGATTTTTGACATTTTGGAGTCTCAAAAGGCTGAGTACACTATG
AAAGTTGCATATATAGAGATTTATAATGAGGAGATAACAGATCTTCTTTCCCTGGACGAG
GAATCAAAACCGATAGATGAGAAGCAGAGAAAGCCATTAGCTCTTATGGAGGATGGAAAA
GGTGCAGTTTTCATTAGAGGTCTAGAAGAGGTGACAGTATCAACTGCAGATGAAATATAC
AAAATTTTGGAGAAAGGATCTGTGAATAAGCATACAGCTGAGACGCTTCTTAATAAACAA
AGCAATAGGTCTCATTCGATATTTTCCATCACCTTACATGTTAAGGAATGTACTCATGAG
GGACTAGAACTGATTAAGTGTGGAAAACTGAATCTTGTTGACCTAGCTGGATCCGAGAAC
ATTTTACGTTCTGGTGCAAAAGAGGGAAGAGCAAGAGAGGCAGGGGAGATAAATAAGAGC
TTGCTTACCTTGGGCAGGGTCATCAATGCTTTGGTTGATCACTCTGGACATGTTCCATAC
AGGGATAGCAAGTTGACAAGGTTTCTGAGGGATTCGTTAGGAGGAAAAACAAAGACATGC
ATAATTGCCACAGTTTCACCATCCATCCAGTGCTTGGAAGAGACTCTCAGTACTCTCGAA
TATGCTAATCGTGCCAAGCAAATTAAAAACAGGCCAGAGGTTAACCAGAAGCTGACAAAA
TCTGCCCTAATCAAAGATTTGTATGTGGAGATGGACTGCCTAAAGCAAGAATTACATGCA
ACGAGGGAGAAGAATGGAATCTACATACCACAAGATCGTTTCCTGAGTGAAGAAGCAGCT
CATAAGGCGATAGTTGGGAAACTGAAGTTCACAGAACTTGATTTAGAGTCCAAAAACAAG
AAACTGATAGAAGTTCAGGATCTTTACGATAATCAGCGACAACTGACAGCAGATTTAACC
GAACAACTTGAGAGAACTCAGAGAGAACTAAAGAAAGCTGAACAAGCTTTCAATGATCTA
GAAGCTCAAAACAGGCGAGTGAAAGAAATGATTCAAGAGAAGGATTCTCTAGTATCCGAT
GTCATTAAATCTGAAAAGGAAATGACTGATAAAGCACTTGAGCTTCGAGATGAAGTAGAG
AATGCAGAATCAGAGATATCCAGCTTGTTCGCCAAAATTGAAAAAGGCAATAGTAGAGAG
GAAAGAAACAGAATCCTTGTGCAAAGCTTCCGCAGCAAATTATCTCAGCAGCTTGAAATT
TTAAAGAGAAAAACAGCAATTTCTGTAACCAAACAAGAGCAGCAATTGAATGTAATACTA
GAAGATACACAATCCTTCTTAGCTAATAAAAGAAGGGCTACAGATGAATTGAAGGTTCAG
CTCCAGAAGCTGAAAGACAAGTATAACTCCGATATCCAGAATTTAGCTGTTCCAGTCCAA
GATCTTCATGAAAATTCTCAGTTAGCTTTTAGCAAAGTGAATTCAGAAATATCAAAGCAT
TCTTCTGCTTTTACGGATCTTGTTGGAAAGATTTCCGCAGATGTTAATGCTATACTCAAC
GGTCTGCAAGGTAATATTCGGGAACTTGAGGTGAAGATAAATGCATTTGTGCGACAAGAA
CAACAGTATCAAACAAGAAGATATCATGAAATTCAAATTAGCTCTGAAGTTCTCCTCAAC
TTTTTCAAGACCTTGAATACATATATTTCAAAATTGAGACTAATGGATGAAAAATCACAA
ACAATTAATAATCAGCAACTCTTCACCCTTGAAGATAAGTTTGAGGAGCTGGCTGCAAGT
GAAGAACGTCAACTTATAGAAAAAGTTGCAGAGCTTATATTAGCTTCCAGTACTAAGAAG
AAAAGGCTGGTTCAAACAGCAGTCAATGACCTTAGAGAGTGCTCTACTATCAAAACCAGA
AATCTAAATGCTGAGTTTTCAGACATACAAGGTTGTGCTAATTCTGCCTATGAAGAGTGG
ACAAACTACATTGAAAGCACAGAATCCCACCATATCGAGGATTCAACTAGATTGGAATTT
TGGAAGAGTAGCCTAGCAGGAAACATCGATTGCTGTTTGACAAAATCAGAGGGGATCGAA
GATGGATGGAGAAATGCCCAAGAATCCCTTCATTCCCAAGAAACAAGAACCATCAACTCA
ATCGATTGCATTGTTAAGAGTGCTATGGAATCAAATGGAAAGATCGGCACTCAGTTTTCC
TCCACAGTGACTTCCATACTAGAAGAAACAGCTATTTCCAAGAGGAATCTTCTTTTTGTT
ATGGAAAGTTTGCTGAAACTTGATCATGATGAATGTGAGAAGATCTGTTCATCTATTCAT
CCTTGTGTTGAGGATATGAAACAGATGAAAGACAGACATTCATCCGAAGTATCAGAGATA
GCGGAAAATGCAGGAGAAGTATTGACAGATGAGTATAAGGTTGATGAACCGTCAAGCTCA
ACTCTGAGGAGGAAAAGAGTTAACGTGCCAAGTAAGGAATCTATTGAAAATCTCAGAACT
CCTTTTCTCGAGGAGTCACTCAAATCATTTCAAGGCAATGGAATAGCAAACCGAGCTAGC
AGAAATGTAAATGCAACCAAAAGTGGGTGA