Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005116
CDS Infomation

pacid=37458321 polypeptide=PGSC0003DMP400003625 locus=PGSC0003DMG400002022 ID=PGSC0003DMT400005116.v4.03 annot-version=v4.03
Sequence

ATGGTTAAACCTTGCTGGAAACCTTCTGTTGAGGGGGATGGTGGTGCAGGGAGGGGTGGG
GATACTAGGGGTAGGGTTGATGGTTTAATGTGGTATAAGGATTTGGGGGTTCATGTAAAT
GGAGAATTTTCAATGGCAATAATACAAGCTAATAGTTTGATGGAGGATCAGAGCCAGCTT
GAATCAGGTCCATTGAGTTCTCTTGAATCAGGTCCTTATGGAACATTTGTTGGAGTTTAT
GATGGACATGGAGGACCGGAGACGTCCTGTTTCGTAAACAAGACTTTGTTCTCCAATCTT
AAGAAATTTGCAACTGAGCATCAAGAAATATCTGCAGATGTCATAAAAAAAGCTTTCTTG
AAAACGGATGAGGAGTTTTTGTCTCTTGTGAAGCAACAATGGTTTGAGAAGCCACAACTT
GCATCAGTGGGATCTTGTTGTTTGGTTGGTGTAATCTGCAATGGACTACTATATATTGCC
AATGCCGGAGATTCGCGTGTGGTGTTAGGTAGAACAGAAAAAGCTTCAAGGGGCGTGACA
GCTATTCAATTGTCAGTGGAGCACAATGCTAATAATGAGTCTGTGAGAGATGAGCTTAGA
TCATTGCATCCCCAGGATTCACAGATTGTGCTTCTCAAACACAAAGTTTGGCGCGTGAAG
GGTATCATACAGGTTTCAAAGTCAATTGGTGATGCCTATCTTAAGAGGGCAGAGTTCAAT
CAGGCACCCCTGTTGGCAAAGTTTAGATTGCCCGAATCCTTCTCCAAGCCGATCCTCAGT
GCGGAACCATCAATTTTCATTCACAGATTGACTTCCAAAGATCAGTTCCTCATATTTGGT
TCAGATGGTCTCTGGGAACATCTTAGCAACCAGGAGGCTGTTGATATAGTCAACAGTCAA
CCCCGAAACGTAAGCATTCAATCTCTGGTAATATGA

Peptide Sequence

PEP ID

PGSC0003DMP400003625
PEP Infomation

pacid=37458321 transcript=PGSC0003DMT400005116 locus=PGSC0003DMG400002022 ID=PGSC0003DMT400005116.v4.03 annot-version=v4.03
Sequence

MVKPCWKPSVEGDGGAGRGGDTRGRVDGLMWYKDLGVHVNGEFSMAIIQANSLMEDQSQL
ESGPLSSLESGPYGTFVGVYDGHGGPETSCFVNKTLFSNLKKFATEHQEISADVIKKAFL
KTDEEFLSLVKQQWFEKPQLASVGSCCLVGVICNGLLYIANAGDSRVVLGRTEKASRGVT
AIQLSVEHNANNESVRDELRSLHPQDSQIVLLKHKVWRVKGIIQVSKSIGDAYLKRAEFN
QAPLLAKFRLPESFSKPILSAEPSIFIHRLTSKDQFLIFGSDGLWEHLSNQEAVDIVNSQ
PRNVSIQSLVI*

Transcript Sequence

Transcript ID

PGSC0003DMT400005116
Transcript Infomation

pacid=37458321 locus=PGSC0003DMG400002022 ID=PGSC0003DMT400005116.v4.03 annot-version=v4.03
Sequence

ATGGTTAAACCTTGCTGGAAACCTTCTGTTGAGGGGGATGGTGGTGCAGGGAGGGGTGGG
GATACTAGGGGTAGGGTTGATGGTTTAATGTGGTATAAGGATTTGGGGGTTCATGTAAAT
GGAGAATTTTCAATGGCAATAATACAAGCTAATAGTTTGATGGAGGATCAGAGCCAGCTT
GAATCAGGTCCATTGAGTTCTCTTGAATCAGGTCCTTATGGAACATTTGTTGGAGTTTAT
GATGGACATGGAGGACCGGAGACGTCCTGTTTCGTAAACAAGACTTTGTTCTCCAATCTT
AAGAAATTTGCAACTGAGCATCAAGAAATATCTGCAGATGTCATAAAAAAAGCTTTCTTG
AAAACGGATGAGGAGTTTTTGTCTCTTGTGAAGCAACAATGGTTTGAGAAGCCACAACTT
GCATCAGTGGGATCTTGTTGTTTGGTTGGTGTAATCTGCAATGGACTACTATATATTGCC
AATGCCGGAGATTCGCGTGTGGTGTTAGGTAGAACAGAAAAAGCTTCAAGGGGCGTGACA
GCTATTCAATTGTCAGTGGAGCACAATGCTAATAATGAGTCTGTGAGAGATGAGCTTAGA
TCATTGCATCCCCAGGATTCACAGATTGTGCTTCTCAAACACAAAGTTTGGCGCGTGAAG
GGTATCATACAGGTTTCAAAGTCAATTGGTGATGCCTATCTTAAGAGGGCAGAGTTCAAT
CAGGCACCCCTGTTGGCAAAGTTTAGATTGCCCGAATCCTTCTCCAAGCCGATCCTCAGT
GCGGAACCATCAATTTTCATTCACAGATTGACTTCCAAAGATCAGTTCCTCATATTTGGT
TCAGATGGTCTCTGGGAACATCTTAGCAACCAGGAGGCTGTTGATATAGTCAACAGTCAA
CCCCGAAACGTAAGCATTCAATCTCTGGTAATATGA