Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005113
CDS Infomation

pacid=37455675 polypeptide=PGSC0003DMP400003622 locus=PGSC0003DMG400002021 ID=PGSC0003DMT400005113.v4.03 annot-version=v4.03
Sequence

ATGGGGGCATCAAACTCTAAACTAGAGGACGATAAATCCTTGCAGCTTTGTCGTGAACGG
AAGAAGTTTGTAAGGCAAGCTCTTGATGGACGGTGTAATCTAGCAGCGACTCATATTGCT
TATATTGAGTCTCTTAAAATTACAGGAACTGTTTTAAGGAGATTTGCTGAACCTGAGGCT
CCAATCGGATCTTCAATCTACACTTCAACTAGTGCAACCCCTGAGCTACGTGGATTAACT
GAAAAGTCTCTTTCCCATTTTTCATTCTCTTCTCGATCCATCTCACGTCATGTAGATGCA
ACTGAGAATATCCTACCATCTCCTTCACCTCCAACCTCAAGTCGATACCATGCTAATCAC
ATGAAATTTAGAGGTACATTTTCTAGGAAAGTTGAAGAAAAACCTTCTGTTCCAGTTACT
GTTTCAGTTACTTCAGCTACACCTCAGAACTCCACGCCTCGTTCCACAGAGAGGCCTGAA
GCATCACCTTTTGAATTCCCTCCTGAAACTTCACCATTTGAAATCCCTCCTTCCCCATCT
GAAACTTCACCTTGGGACTATTTTGGTCTTGGCCATGATATTGATAATCATTTGACTTCA
CAAGATGGAAGGGCTGAGAATGGAAATGACAATAGACATCATGGAGATGAGGATATAATT
TCTGCATCAGAAGATGAAGAAGAACATTATTCTTCACCTGGAAGGGATGGGTCACAGGTC
TCGGATGATGAATTTGATGAGCCTTCCGCAGAAACACTGGTCCGAAGTTTTCAAAATGTC
AATAGAACAACTGATCATGCTAACAATAGTGTCTCACCTGACATAACCTCTGTGAGGAGT
GGACTGTCAGAAGCCAAGTCTCTGAATGGGGAGAAAAGCAAGTCACCTGATTTGTCCCCA
CTAAGAGCTGCACCTTCAGGACCTGCTGATGATAATGACATAAAGACACCAGTAAAAGAA
AATGATGTTGAGAATAAGGTTGCACCCAAGGACTTCTTTTTTAGCATAAAAGATATTGAA
TATCTCTTCATAAAAGCATCTGAATCAGGAAGAGAAGTTCCGCGCATGTTAGAAGCGAAC
AAATTCCATTTCCGTCCAATTTTTCCAGGGAAAGAAACCGGGTCAATGACCAGAATATTA
ATGAAGTCTTGTTTCTCTTGCGGGGACGATCCAAGCCATATTCCTGAAGAGCCTCCTCAA
AATTCTGTGAAGTACCTGACATGGCATCGTACCACATCATCTCATGCTTCATCCCCAAAT
CGGCATGGTGTAAACTCCACAGATGGTATTGAGGATGTTTCCAACAATCTCTTTGATAAC
TTTTGTATGGTCTCAGGAAGTCATGCCTCTACGTTAGATCGGCTTTTTGCATGGGAGAAA
AAGCTATATGACGAAGTCAAGGCTAGTGAGATGATCCGAAGTGATTATGATGCTAAGCGT
AAGTTTCTCCGACAACTAGAATCTAAGGTAGAAACTCCTCAGAGGATTGACAAGACGCGT
GCTGTTGTGAAGGATCTTCATTCGAGAATCGGAGTTGCAATTCATAGAATTAATTCCATC
TCCAGGAAAATTGAAGAAATAAGAGACAAGGAACTTCAGCCTCAATTGGAGGAGTTGATT
GAGGGATTGAGAAAGATGTGGGAAGTTATGTTCGACTGTCACAAGCTTCAGCTCCATATC
ATATCGATAGCTCATTCGCCTGGAAATATGAAGATCCTTATTCAATCAGATTCTCGTCGG
CAGATTGCAATCCATCTTGAACATGAATTGAGTTCTCTATCAACAAGTTTTACAAAGTGG
ATGGTCTCTCAGAAGGCATACGTGGAAGCTATAGATAAGTGGCTTCACAAATCCGTCTTC
CTCCGCGAAAAATCATCCAGAAGAAAAAGAAAGCAGCAGCCTGTGCCACTCAGAAACCAC
GGCCCTCCTATTTATACCACCTGTTCTGTCTGGTTGGAGATGTTCGATTCCTTGCCTACT
AAAGAGGTTTCAGACGCTATAAAGGGGTTGGCTGCCGAAATCTCTCACCTCCTACCCCGG
CAAGAGAAGCACCAAGGGAAGGGTGGAAATCATCGTCATGGAATCGATGGTGATCCAGGT
CTTAAGACCCCACTGAGAGATGATTCTCCTGAAGACTGGATAGCCGGCTTCGATCGTTTT
CGTACAAGCTTGGCCTTTTTCCTGAGCCAGTTAAACAACTTCTCAGAGTCTTCTGTCAAG
ATGTTTACTCAACTCCAAAAGGCCATCCAAGAAGCCAAACATGGTCATGCGCTCCGCATG
AATTCTCAATCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400003622
PEP Infomation

pacid=37455675 transcript=PGSC0003DMT400005113 locus=PGSC0003DMG400002021 ID=PGSC0003DMT400005113.v4.03 annot-version=v4.03
Sequence

MGASNSKLEDDKSLQLCRERKKFVRQALDGRCNLAATHIAYIESLKITGTVLRRFAEPEA
PIGSSIYTSTSATPELRGLTEKSLSHFSFSSRSISRHVDATENILPSPSPPTSSRYHANH
MKFRGTFSRKVEEKPSVPVTVSVTSATPQNSTPRSTERPEASPFEFPPETSPFEIPPSPS
ETSPWDYFGLGHDIDNHLTSQDGRAENGNDNRHHGDEDIISASEDEEEHYSSPGRDGSQV
SDDEFDEPSAETLVRSFQNVNRTTDHANNSVSPDITSVRSGLSEAKSLNGEKSKSPDLSP
LRAAPSGPADDNDIKTPVKENDVENKVAPKDFFFSIKDIEYLFIKASESGREVPRMLEAN
KFHFRPIFPGKETGSMTRILMKSCFSCGDDPSHIPEEPPQNSVKYLTWHRTTSSHASSPN
RHGVNSTDGIEDVSNNLFDNFCMVSGSHASTLDRLFAWEKKLYDEVKASEMIRSDYDAKR
KFLRQLESKVETPQRIDKTRAVVKDLHSRIGVAIHRINSISRKIEEIRDKELQPQLEELI
EGLRKMWEVMFDCHKLQLHIISIAHSPGNMKILIQSDSRRQIAIHLEHELSSLSTSFTKW
MVSQKAYVEAIDKWLHKSVFLREKSSRRKRKQQPVPLRNHGPPIYTTCSVWLEMFDSLPT
KEVSDAIKGLAAEISHLLPRQEKHQGKGGNHRHGIDGDPGLKTPLRDDSPEDWIAGFDRF
RTSLAFFLSQLNNFSESSVKMFTQLQKAIQEAKHGHALRMNSQS*

Transcript Sequence

Transcript ID

PGSC0003DMT400005113
Transcript Infomation

pacid=37455675 locus=PGSC0003DMG400002021 ID=PGSC0003DMT400005113.v4.03 annot-version=v4.03
Sequence

ATGGGGGCATCAAACTCTAAACTAGAGGACGATAAATCCTTGCAGCTTTGTCGTGAACGG
AAGAAGTTTGTAAGGCAAGCTCTTGATGGACGGTGTAATCTAGCAGCGACTCATATTGCT
TATATTGAGTCTCTTAAAATTACAGGAACTGTTTTAAGGAGATTTGCTGAACCTGAGGCT
CCAATCGGATCTTCAATCTACACTTCAACTAGTGCAACCCCTGAGCTACGTGGATTAACT
GAAAAGTCTCTTTCCCATTTTTCATTCTCTTCTCGATCCATCTCACGTCATGTAGATGCA
ACTGAGAATATCCTACCATCTCCTTCACCTCCAACCTCAAGTCGATACCATGCTAATCAC
ATGAAATTTAGAGGTACATTTTCTAGGAAAGTTGAAGAAAAACCTTCTGTTCCAGTTACT
GTTTCAGTTACTTCAGCTACACCTCAGAACTCCACGCCTCGTTCCACAGAGAGGCCTGAA
GCATCACCTTTTGAATTCCCTCCTGAAACTTCACCATTTGAAATCCCTCCTTCCCCATCT
GAAACTTCACCTTGGGACTATTTTGGTCTTGGCCATGATATTGATAATCATTTGACTTCA
CAAGATGGAAGGGCTGAGAATGGAAATGACAATAGACATCATGGAGATGAGGATATAATT
TCTGCATCAGAAGATGAAGAAGAACATTATTCTTCACCTGGAAGGGATGGGTCACAGGTC
TCGGATGATGAATTTGATGAGCCTTCCGCAGAAACACTGGTCCGAAGTTTTCAAAATGTC
AATAGAACAACTGATCATGCTAACAATAGTGTCTCACCTGACATAACCTCTGTGAGGAGT
GGACTGTCAGAAGCCAAGTCTCTGAATGGGGAGAAAAGCAAGTCACCTGATTTGTCCCCA
CTAAGAGCTGCACCTTCAGGACCTGCTGATGATAATGACATAAAGACACCAGTAAAAGAA
AATGATGTTGAGAATAAGGTTGCACCCAAGGACTTCTTTTTTAGCATAAAAGATATTGAA
TATCTCTTCATAAAAGCATCTGAATCAGGAAGAGAAGTTCCGCGCATGTTAGAAGCGAAC
AAATTCCATTTCCGTCCAATTTTTCCAGGGAAAGAAACCGGGTCAATGACCAGAATATTA
ATGAAGTCTTGTTTCTCTTGCGGGGACGATCCAAGCCATATTCCTGAAGAGCCTCCTCAA
AATTCTGTGAAGTACCTGACATGGCATCGTACCACATCATCTCATGCTTCATCCCCAAAT
CGGCATGGTGTAAACTCCACAGATGGTATTGAGGATGTTTCCAACAATCTCTTTGATAAC
TTTTGTATGGTCTCAGGAAGTCATGCCTCTACGTTAGATCGGCTTTTTGCATGGGAGAAA
AAGCTATATGACGAAGTCAAGGCTAGTGAGATGATCCGAAGTGATTATGATGCTAAGCGT
AAGTTTCTCCGACAACTAGAATCTAAGGTAGAAACTCCTCAGAGGATTGACAAGACGCGT
GCTGTTGTGAAGGATCTTCATTCGAGAATCGGAGTTGCAATTCATAGAATTAATTCCATC
TCCAGGAAAATTGAAGAAATAAGAGACAAGGAACTTCAGCCTCAATTGGAGGAGTTGATT
GAGGGATTGAGAAAGATGTGGGAAGTTATGTTCGACTGTCACAAGCTTCAGCTCCATATC
ATATCGATAGCTCATTCGCCTGGAAATATGAAGATCCTTATTCAATCAGATTCTCGTCGG
CAGATTGCAATCCATCTTGAACATGAATTGAGTTCTCTATCAACAAGTTTTACAAAGTGG
ATGGTCTCTCAGAAGGCATACGTGGAAGCTATAGATAAGTGGCTTCACAAATCCGTCTTC
CTCCGCGAAAAATCATCCAGAAGAAAAAGAAAGCAGCAGCCTGTGCCACTCAGAAACCAC
GGCCCTCCTATTTATACCACCTGTTCTGTCTGGTTGGAGATGTTCGATTCCTTGCCTACT
AAAGAGGTTTCAGACGCTATAAAGGGGTTGGCTGCCGAAATCTCTCACCTCCTACCCCGG
CAAGAGAAGCACCAAGGGAAGGGTGGAAATCATCGTCATGGAATCGATGGTGATCCAGGT
CTTAAGACCCCACTGAGAGATGATTCTCCTGAAGACTGGATAGCCGGCTTCGATCGTTTT
CGTACAAGCTTGGCCTTTTTCCTGAGCCAGTTAAACAACTTCTCAGAGTCTTCTGTCAAG
ATGTTTACTCAACTCCAAAAGGCCATCCAAGAAGCCAAACATGGTCATGCGCTCCGCATG
AATTCTCAATCATAA