Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005064
CDS Infomation

pacid=37464548 polypeptide=PGSC0003DMP400003591 locus=PGSC0003DMG400001999 ID=PGSC0003DMT400005064.v4.03 annot-version=v4.03
Sequence

ATGTCGAGGCAAGCTCATCTTCCGCCTCGTTGCCCATTTCAGAAGAAACCGTTAACTTGC
CCTGTTCAAGATCCTTTTAGCCCACCATCACACCAACATAACTCGTTGCCTCCTCGACAT
CAAAAATCTATTTCCCAAAGCTCCATCTTAGAAGAGCAGCCTGCATGGCTTGATGAGCTG
CTTAGTGATTCGGGATCAAATTCTAGTGGCATAATGCATAGGAGATCAGCTAGTGATTCT
TTGACAGTTTTGGATGGTCTTGTTTCATTTGAAGGCTTTGATAAGTTTGACGAAACTGAA
TCCAATGCGTCTTGTGAATCGGATAGTAGTTCAAAGACTAATTGTATCTATGGTCCTAAT
TCGCCTCGTGGAAAGAGCAATATAACCTTTGCAGAGAATGCTATAGTTTCAGCATTATCA
GAATATGTGTCTCCAAACCCTTTACAATATTTAGATAGGTGTGTTTCTGTGTCTGGAGCT
GCACAATTGGAGTTAGTGGGAAATGCTTCTGGTGCAGCAGATGATGTCAGTGCTGAGGCA
AAGCCAATGAAACGGCATCCTGGACAGAGGTCGAGAGTTCGTAAACTCCAATATATAGCT
GAACTAGAGAGAACTGTCAACACATATGAGGCTATAGAGTCAGATTTAACTGCCAAAGTT
GCTTCTCTGCTTCAGCAACGTGCTACTTTATCAATGGAGAATAGAGAGCTAAAGCAACAG
ATGCTCAGACTTCAGCAAGAAAAAGTCATTGTTGACGCTCAATACAGGTCATTGAGGAAA
GAATTGGAAAGACTGAAATGTTTAGCGCGTTCTCGCAATGGTAAGCTGAGCACCAACTTC
AGGCTGAGTTCTGCTACTGAGATGACTGGTTCGGATGCAGCTTGGCAGATGCTGGACTTT
GGAAAACTGGATCTCAACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400003591
PEP Infomation

pacid=37464548 transcript=PGSC0003DMT400005064 locus=PGSC0003DMG400001999 ID=PGSC0003DMT400005064.v4.03 annot-version=v4.03
Sequence

MSRQAHLPPRCPFQKKPLTCPVQDPFSPPSHQHNSLPPRHQKSISQSSILEEQPAWLDEL
LSDSGSNSSGIMHRRSASDSLTVLDGLVSFEGFDKFDETESNASCESDSSSKTNCIYGPN
SPRGKSNITFAENAIVSALSEYVSPNPLQYLDRCVSVSGAAQLELVGNASGAADDVSAEA
KPMKRHPGQRSRVRKLQYIAELERTVNTYEAIESDLTAKVASLLQQRATLSMENRELKQQ
MLRLQQEKVIVDAQYRSLRKELERLKCLARSRNGKLSTNFRLSSATEMTGSDAAWQMLDF
GKLDLN*

Transcript Sequence

Transcript ID

PGSC0003DMT400005064
Transcript Infomation

pacid=37464548 locus=PGSC0003DMG400001999 ID=PGSC0003DMT400005064.v4.03 annot-version=v4.03
Sequence

ATGTCGAGGCAAGCTCATCTTCCGCCTCGTTGCCCATTTCAGAAGAAACCGTTAACTTGC
CCTGTTCAAGATCCTTTTAGCCCACCATCACACCAACATAACTCGTTGCCTCCTCGACAT
CAAAAATCTATTTCCCAAAGCTCCATCTTAGAAGAGCAGCCTGCATGGCTTGATGAGCTG
CTTAGTGATTCGGGATCAAATTCTAGTGGCATAATGCATAGGAGATCAGCTAGTGATTCT
TTGACAGTTTTGGATGGTCTTGTTTCATTTGAAGGCTTTGATAAGTTTGACGAAACTGAA
TCCAATGCGTCTTGTGAATCGGATAGTAGTTCAAAGACTAATTGTATCTATGGTCCTAAT
TCGCCTCGTGGAAAGAGCAATATAACCTTTGCAGAGAATGCTATAGTTTCAGCATTATCA
GAATATGTGTCTCCAAACCCTTTACAATATTTAGATAGGTGTGTTTCTGTGTCTGGAGCT
GCACAATTGGAGTTAGTGGGAAATGCTTCTGGTGCAGCAGATGATGTCAGTGCTGAGGCA
AAGCCAATGAAACGGCATCCTGGACAGAGGTCGAGAGTTCGTAAACTCCAATATATAGCT
GAACTAGAGAGAACTGTCAACACATATGAGGCTATAGAGTCAGATTTAACTGCCAAAGTT
GCTTCTCTGCTTCAGCAACGTGCTACTTTATCAATGGAGAATAGAGAGCTAAAGCAACAG
ATGCTCAGACTTCAGCAAGAAAAAGTCATTGTTGACGCTCAATACAGGTCATTGAGGAAA
GAATTGGAAAGACTGAAATGTTTAGCGCGTTCTCGCAATGGTAAGCTGAGCACCAACTTC
AGGCTGAGTTCTGCTACTGAGATGACTGGTTCGGATGCAGCTTGGCAGATGCTGGACTTT
GGAAAACTGGATCTCAACTAG