Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005052
CDS Infomation

pacid=37466624 polypeptide=PGSC0003DMP400003582 locus=PGSC0003DMG400001996 ID=PGSC0003DMT400005052.v4.03 annot-version=v4.03
Sequence

ATGGCTTATGCTGCTCTTTCTTCACTCATGTATACATTGGAACAACTCTTCAAACCTAAC
CAATCTTTCGTTTGTCGAAGTTCTACACAACAACATGTCGAATCTCTCCATCAAAATCTT
TCTGCTCTGCAAGATTTCCTTGACGATACTACAAAGGATATTGAAACTCTTAAGGTGGTA
GAAAAGAGGATCAGAAATGTAGTACACAAAGCAGAAGATAGAGTTGATTCAAGTCTAAGA
AACATCATTCTAGCAGATCGTGAGGACAAGCGGCAAAAGGCTTGTACATCCTTTTATGAA
GAATTGTTGAAAGTGGATGAACAAGTGTATATTCTCAAAAAACAAGTGATGCTGATTGAG
TTTAGTATGCATGGAAGCAAATCTGCAGAATTAGCAACAACTTCTTCCTCACCAGAAAGA
AGTAAAATTGAGGAAAATACTATTGTTGGGATGCAGGATGACCTCAACACCATACTTGAT
CGCGTCACTTCCCAAATAGGCGAGTTGACTGTCATACCAATTTTTGGTATGGGCGGTATC
GGTAAGACAACTCTTGCAAGAAAAGTTTATGATGATTCATCTATTCGTTCTCGATTTGAT
AAACATGCATGGGTCACTATCTCCCAAGAATACAATAAGAGACAAATGCTTCTTGAAGTT
GTCTCTTCAATTACGGGAAGCAATCAAGAAGTGAGCGATGATGAACTAATGGAGATTGTG
TATAGAGGTTTGAAGGGTAGGAGATTCCTATTTGTCATAGATGATATTTGGAGTACTGAG
GCATGGGACCAAATGCAAAGAATATTTCCAAATGATGACAATAAAAGCCGAATTCTATTA
ACTACTCGGCTCAAGTATGTTGCTGATTATGTAAACTGCCCTGATTTTCCTCCTCATAAA
GACAGAGAGATTAACGTTTCCAAGTTGATTAGGCTATGGATTTCTGAGCAATTCGTAAAG
GCAAGAAAGAATAAAAGATTAGAAGTGGTAGCAGAGGAGTATGTAAAAGAGTTAATTGAT
AGAAGTCTAATTTTGATTGGTCAACAAAGGGCTAATGGAAGGATGAGAAGTTGCAAAATT
CACGATCTTCTTCGCCAATTGTGCCTAAGTGAAGCTCATACTGAAAATGTTTTGCATGTC
ATGAATGGGGATGCTCTCAAAGCCATAGATGATCAACGTCGAGTGATCCTTGTGTCTAAT
GATGAAGAGAAGCATGATTATCGTCTGCGACATAGCAGTGGTATAATACGTACCTTTATT
TCAGTGGATGTAGCTTTTCCAAAATGGATGTGTTCACAGTTGAAGTTGCTTAAGGTATTG
GATGTATTATCAATTGAATACGATTTCTCTTGGGTAATACCTGAGCTTGTACATTTGAGA
TATGTTGCTGTAAGAATTAAGGAAGCTAGTTCACTAGACAAATTGAGAAATCTACAGACC
ATAGTTCTTCGAAGATATATCTCTTTCATACCAACAACGTTGAAGCAGTCACTAGATATC
TGGAGAATGTCAGAGATAAGACATTTGGATATTAGATGGCCAAATTATATATCAAATCCC
CTTGAAGCAGAACAACCTTTGTGCCTTCTGAATAACTTGCAAACGCTTTATCTTCATTAT
TCTCCTTTTGTTGCGGAAATCATAAGAAGAACTCCCAATCTAAAAAAGCTAAAGATTTTA
GATAGATCCAAGCTTCCTGATTTTCTTGATTCTCTCAGTCTTTTACAGGATATGGAGACA
CTACACATAGAAACACGAAACAACATTGACCCGGTGATTATCCCAGGAGATATTTTTCTT
CCTAATCTCAAGAAGTTGACATTAACACGTACTCGTATACCATGGGAAGTTGTGAATTTG
CTGGCTAATTTACCGAATCTTGAGGTGCTCAAAGGGTATCGTGCATTTTCTGGAACAGAT
TGGAAAGTAGATGAAGATGTTGTGTTTCATAAATTAAAATATCTACAACTGTATGGGCCC
TATGATTTTCAAAGGTGGGAAGCAGATGGTAGTGATAATTTTCCGATGCTTGAGCAACTA
ATACTGCATTGGTTTATTCAACTGGAGGAGATTCCGGAGAGTATTGGAGATACAATGACA
CTAAAGTTAATCCAAATAGTTGATTGCAGTTCTGGTGTAGTAAATAGTGCAAAGAAAATT
CAACAAGAGCAAGAAAGCTTGGGAAATTATGAGCTACAACTTCAAATTACTCAAAAGGTA
TGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400003582
PEP Infomation

pacid=37466624 transcript=PGSC0003DMT400005052 locus=PGSC0003DMG400001996 ID=PGSC0003DMT400005052.v4.03 annot-version=v4.03
Sequence

MAYAALSSLMYTLEQLFKPNQSFVCRSSTQQHVESLHQNLSALQDFLDDTTKDIETLKVV
EKRIRNVVHKAEDRVDSSLRNIILADREDKRQKACTSFYEELLKVDEQVYILKKQVMLIE
FSMHGSKSAELATTSSSPERSKIEENTIVGMQDDLNTILDRVTSQIGELTVIPIFGMGGI
GKTTLARKVYDDSSIRSRFDKHAWVTISQEYNKRQMLLEVVSSITGSNQEVSDDELMEIV
YRGLKGRRFLFVIDDIWSTEAWDQMQRIFPNDDNKSRILLTTRLKYVADYVNCPDFPPHK
DREINVSKLIRLWISEQFVKARKNKRLEVVAEEYVKELIDRSLILIGQQRANGRMRSCKI
HDLLRQLCLSEAHTENVLHVMNGDALKAIDDQRRVILVSNDEEKHDYRLRHSSGIIRTFI
SVDVAFPKWMCSQLKLLKVLDVLSIEYDFSWVIPELVHLRYVAVRIKEASSLDKLRNLQT
IVLRRYISFIPTTLKQSLDIWRMSEIRHLDIRWPNYISNPLEAEQPLCLLNNLQTLYLHY
SPFVAEIIRRTPNLKKLKILDRSKLPDFLDSLSLLQDMETLHIETRNNIDPVIIPGDIFL
PNLKKLTLTRTRIPWEVVNLLANLPNLEVLKGYRAFSGTDWKVDEDVVFHKLKYLQLYGP
YDFQRWEADGSDNFPMLEQLILHWFIQLEEIPESIGDTMTLKLIQIVDCSSGVVNSAKKI
QQEQESLGNYELQLQITQKVC*

Transcript Sequence

Transcript ID

PGSC0003DMT400005052
Transcript Infomation

pacid=37466624 locus=PGSC0003DMG400001996 ID=PGSC0003DMT400005052.v4.03 annot-version=v4.03
Sequence

ATGGCTTATGCTGCTCTTTCTTCACTCATGTATACATTGGAACAACTCTTCAAACCTAAC
CAATCTTTCGTTTGTCGAAGTTCTACACAACAACATGTCGAATCTCTCCATCAAAATCTT
TCTGCTCTGCAAGATTTCCTTGACGATACTACAAAGGATATTGAAACTCTTAAGGTGGTA
GAAAAGAGGATCAGAAATGTAGTACACAAAGCAGAAGATAGAGTTGATTCAAGTCTAAGA
AACATCATTCTAGCAGATCGTGAGGACAAGCGGCAAAAGGCTTGTACATCCTTTTATGAA
GAATTGTTGAAAGTGGATGAACAAGTGTATATTCTCAAAAAACAAGTGATGCTGATTGAG
TTTAGTATGCATGGAAGCAAATCTGCAGAATTAGCAACAACTTCTTCCTCACCAGAAAGA
AGTAAAATTGAGGAAAATACTATTGTTGGGATGCAGGATGACCTCAACACCATACTTGAT
CGCGTCACTTCCCAAATAGGCGAGTTGACTGTCATACCAATTTTTGGTATGGGCGGTATC
GGTAAGACAACTCTTGCAAGAAAAGTTTATGATGATTCATCTATTCGTTCTCGATTTGAT
AAACATGCATGGGTCACTATCTCCCAAGAATACAATAAGAGACAAATGCTTCTTGAAGTT
GTCTCTTCAATTACGGGAAGCAATCAAGAAGTGAGCGATGATGAACTAATGGAGATTGTG
TATAGAGGTTTGAAGGGTAGGAGATTCCTATTTGTCATAGATGATATTTGGAGTACTGAG
GCATGGGACCAAATGCAAAGAATATTTCCAAATGATGACAATAAAAGCCGAATTCTATTA
ACTACTCGGCTCAAGTATGTTGCTGATTATGTAAACTGCCCTGATTTTCCTCCTCATAAA
GACAGAGAGATTAACGTTTCCAAGTTGATTAGGCTATGGATTTCTGAGCAATTCGTAAAG
GCAAGAAAGAATAAAAGATTAGAAGTGGTAGCAGAGGAGTATGTAAAAGAGTTAATTGAT
AGAAGTCTAATTTTGATTGGTCAACAAAGGGCTAATGGAAGGATGAGAAGTTGCAAAATT
CACGATCTTCTTCGCCAATTGTGCCTAAGTGAAGCTCATACTGAAAATGTTTTGCATGTC
ATGAATGGGGATGCTCTCAAAGCCATAGATGATCAACGTCGAGTGATCCTTGTGTCTAAT
GATGAAGAGAAGCATGATTATCGTCTGCGACATAGCAGTGGTATAATACGTACCTTTATT
TCAGTGGATGTAGCTTTTCCAAAATGGATGTGTTCACAGTTGAAGTTGCTTAAGGTATTG
GATGTATTATCAATTGAATACGATTTCTCTTGGGTAATACCTGAGCTTGTACATTTGAGA
TATGTTGCTGTAAGAATTAAGGAAGCTAGTTCACTAGACAAATTGAGAAATCTACAGACC
ATAGTTCTTCGAAGATATATCTCTTTCATACCAACAACGTTGAAGCAGTCACTAGATATC
TGGAGAATGTCAGAGATAAGACATTTGGATATTAGATGGCCAAATTATATATCAAATCCC
CTTGAAGCAGAACAACCTTTGTGCCTTCTGAATAACTTGCAAACGCTTTATCTTCATTAT
TCTCCTTTTGTTGCGGAAATCATAAGAAGAACTCCCAATCTAAAAAAGCTAAAGATTTTA
GATAGATCCAAGCTTCCTGATTTTCTTGATTCTCTCAGTCTTTTACAGGATATGGAGACA
CTACACATAGAAACACGAAACAACATTGACCCGGTGATTATCCCAGGAGATATTTTTCTT
CCTAATCTCAAGAAGTTGACATTAACACGTACTCGTATACCATGGGAAGTTGTGAATTTG
CTGGCTAATTTACCGAATCTTGAGGTGCTCAAAGGGTATCGTGCATTTTCTGGAACAGAT
TGGAAAGTAGATGAAGATGTTGTGTTTCATAAATTAAAATATCTACAACTGTATGGGCCC
TATGATTTTCAAAGGTGGGAAGCAGATGGTAGTGATAATTTTCCGATGCTTGAGCAACTA
ATACTGCATTGGTTTATTCAACTGGAGGAGATTCCGGAGAGTATTGGAGATACAATGACA
CTAAAGTTAATCCAAATAGTTGATTGCAGTTCTGGTGTAGTAAATAGTGCAAAGAAAATT
CAACAAGAGCAAGAAAGCTTGGGAAATTATGAGCTACAACTTCAAATTACTCAAAAGGTA
TGTTGA