Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400005040
CDS Infomation

pacid=37465886 polypeptide=PGSC0003DMP400003578 locus=PGSC0003DMG400001992 ID=PGSC0003DMT400005040.v4.03 annot-version=v4.03
Sequence

ATGTTGCTGATTAATGTCAACTGCCCTGATTTTCCGCCTCATAGTAAGTCTTTTCTAAGT
CTAGAGGATAGTTGGAATCTATTCACTGAGAAAATATTCAAAAAAGATCCATGTCCTCCT
CTGCTAGAAGAAACAGGGAAGCATATTGTACAACAATGTCAAGGGTTACCTCTCTCGGTT
GTTGTCGTTGCTGGACTTCTTGGAAAAATGGACCCAACACATGATAATTGGAAGAAGGTT
GAGGAAAATCTGAACTCATTCTTTGGTACGGTGTCCGAACGGTGCCAATCAATTCTTTCT
CTGAGCTACAATTACTTGCCCCAATATTTAAAGGCCTGTTTTCTCTATGTTGGAGGTTTT
CCAGAAGACAGAGAGATTAATGTTTCCAAGTTGATTAGGCTATGGATTGCTGAGCAATTT
GTAAAGGCAAGAAACAATAAAAGGTTAGAAGTAGTGGCAGAGGAGTATCTAGAAGAGTTA
ATTGATAGAAGTCTAATTTTGACTGGTAAACAAAGGGCTAATGGAAGGATAGAAACTTGC
AAAATTCACGATCTTTTTCGCCAACTATGCCTAAGTGAAGTTCATACTGAAAATATTGTG
TATTACATGAATGGGAATGTTCTCGTGTCCTTATTAGAAGTCATACATGATCAGCGGCGA
GTGATTGATCTGCGTAAACATGAAGAGAAGCAAGTTTATATCAATGATATAACAAGTATA
ACTCGTACCTTTATTTCAATGCAATCTCTTGATTTAGATTCTCCAGATGTGATTTGCTCT
ATTGTTTCACAGTTCAAGTTGCTTAAGGTGTTGGACGTATTATCAGTTTGGTACGATTTC
TCTAGTGTAATACCTGAGCTTGTACATTTGAGATATGTTGCTGCAAGAATTGAGGGAGGT
CTTTCACTAGCCAAATCGAGAAATCTACAGATCATAATTTTTGTAGGTTTTGAACAGACA
GAGTTGGTCCACCCATTAGATATCTGGAGAATGACAGAGATAAGACATTTGGATATTGAA
TGGCCACTATACATTTCAAATCCTCTTGAGGGAGAAAATAATAGTGTTGGAGAACAACCT
TTGTTTCTCAATAACTTGCACACACTTACTCTCCAGTTCTCTCCTTTTTCTAAGGAAATC
ATAAGAAGAACTCCCAATCTAAAAAAGCTAAAGATGTGCGAAATTTCTGACTATCCTTCT
ATTCCTGATTCTCTAATTCTTCTAGAGGAGCTGGAGACACTAAAGATAGAGGTGAACTCC
ATTGACCCGTTGATTTTCTCTGGGGATGTTTTCCCTCCTAATCTCAAGAAGTTGACATTA
TCAAATACTAAAATACCATGGGAAGTTATGAATTTGCTGTCTAATTTACCCAATCTTGAG
GTGCTAAAGGGGTATTATGCATTTTCTGGAACAGATTGGACACTTAATGAAGATGTTGTG
TTTCGCAAATTAAAACATCTACTAATTAGGTCCAAAGATCTGCAAAGGTGGGAAGCAGCT
GGTAGTGATAATTTTCCTATGCTTGAGAAACTAATACTGAATTGGTTGTTTGAACTGGAG
GAGATTCCCGAGAGTATTGGAGATATAATGACACTAAAATTGATCCAAATAGTTGATTGC
AGCTCTGCTGTAGAGAATAGTGCAAAGAGAATTCGAAAAGAGCAACAAAGCTTTGGAAAT
TATGAGCTTCAAGTTCAAATTACTCCTATGCTGGGATTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400003578
PEP Infomation

pacid=37465886 transcript=PGSC0003DMT400005040 locus=PGSC0003DMG400001992 ID=PGSC0003DMT400005040.v4.03 annot-version=v4.03
Sequence

MLLINVNCPDFPPHSKSFLSLEDSWNLFTEKIFKKDPCPPLLEETGKHIVQQCQGLPLSV
VVVAGLLGKMDPTHDNWKKVEENLNSFFGTVSERCQSILSLSYNYLPQYLKACFLYVGGF
PEDREINVSKLIRLWIAEQFVKARNNKRLEVVAEEYLEELIDRSLILTGKQRANGRIETC
KIHDLFRQLCLSEVHTENIVYYMNGNVLVSLLEVIHDQRRVIDLRKHEEKQVYINDITSI
TRTFISMQSLDLDSPDVICSIVSQFKLLKVLDVLSVWYDFSSVIPELVHLRYVAARIEGG
LSLAKSRNLQIIIFVGFEQTELVHPLDIWRMTEIRHLDIEWPLYISNPLEGENNSVGEQP
LFLNNLHTLTLQFSPFSKEIIRRTPNLKKLKMCEISDYPSIPDSLILLEELETLKIEVNS
IDPLIFSGDVFPPNLKKLTLSNTKIPWEVMNLLSNLPNLEVLKGYYAFSGTDWTLNEDVV
FRKLKHLLIRSKDLQRWEAAGSDNFPMLEKLILNWLFELEEIPESIGDIMTLKLIQIVDC
SSAVENSAKRIRKEQQSFGNYELQVQITPMLGL*

Transcript Sequence

Transcript ID

PGSC0003DMT400005040
Transcript Infomation

pacid=37465886 locus=PGSC0003DMG400001992 ID=PGSC0003DMT400005040.v4.03 annot-version=v4.03
Sequence

ATGTTGCTGATTAATGTCAACTGCCCTGATTTTCCGCCTCATAGTAAGTCTTTTCTAAGT
CTAGAGGATAGTTGGAATCTATTCACTGAGAAAATATTCAAAAAAGATCCATGTCCTCCT
CTGCTAGAAGAAACAGGGAAGCATATTGTACAACAATGTCAAGGGTTACCTCTCTCGGTT
GTTGTCGTTGCTGGACTTCTTGGAAAAATGGACCCAACACATGATAATTGGAAGAAGGTT
GAGGAAAATCTGAACTCATTCTTTGGTACGGTGTCCGAACGGTGCCAATCAATTCTTTCT
CTGAGCTACAATTACTTGCCCCAATATTTAAAGGCCTGTTTTCTCTATGTTGGAGGTTTT
CCAGAAGACAGAGAGATTAATGTTTCCAAGTTGATTAGGCTATGGATTGCTGAGCAATTT
GTAAAGGCAAGAAACAATAAAAGGTTAGAAGTAGTGGCAGAGGAGTATCTAGAAGAGTTA
ATTGATAGAAGTCTAATTTTGACTGGTAAACAAAGGGCTAATGGAAGGATAGAAACTTGC
AAAATTCACGATCTTTTTCGCCAACTATGCCTAAGTGAAGTTCATACTGAAAATATTGTG
TATTACATGAATGGGAATGTTCTCGTGTCCTTATTAGAAGTCATACATGATCAGCGGCGA
GTGATTGATCTGCGTAAACATGAAGAGAAGCAAGTTTATATCAATGATATAACAAGTATA
ACTCGTACCTTTATTTCAATGCAATCTCTTGATTTAGATTCTCCAGATGTGATTTGCTCT
ATTGTTTCACAGTTCAAGTTGCTTAAGGTGTTGGACGTATTATCAGTTTGGTACGATTTC
TCTAGTGTAATACCTGAGCTTGTACATTTGAGATATGTTGCTGCAAGAATTGAGGGAGGT
CTTTCACTAGCCAAATCGAGAAATCTACAGATCATAATTTTTGTAGGTTTTGAACAGACA
GAGTTGGTCCACCCATTAGATATCTGGAGAATGACAGAGATAAGACATTTGGATATTGAA
TGGCCACTATACATTTCAAATCCTCTTGAGGGAGAAAATAATAGTGTTGGAGAACAACCT
TTGTTTCTCAATAACTTGCACACACTTACTCTCCAGTTCTCTCCTTTTTCTAAGGAAATC
ATAAGAAGAACTCCCAATCTAAAAAAGCTAAAGATGTGCGAAATTTCTGACTATCCTTCT
ATTCCTGATTCTCTAATTCTTCTAGAGGAGCTGGAGACACTAAAGATAGAGGTGAACTCC
ATTGACCCGTTGATTTTCTCTGGGGATGTTTTCCCTCCTAATCTCAAGAAGTTGACATTA
TCAAATACTAAAATACCATGGGAAGTTATGAATTTGCTGTCTAATTTACCCAATCTTGAG
GTGCTAAAGGGGTATTATGCATTTTCTGGAACAGATTGGACACTTAATGAAGATGTTGTG
TTTCGCAAATTAAAACATCTACTAATTAGGTCCAAAGATCTGCAAAGGTGGGAAGCAGCT
GGTAGTGATAATTTTCCTATGCTTGAGAAACTAATACTGAATTGGTTGTTTGAACTGGAG
GAGATTCCCGAGAGTATTGGAGATATAATGACACTAAAATTGATCCAAATAGTTGATTGC
AGCTCTGCTGTAGAGAATAGTGCAAAGAGAATTCGAAAAGAGCAACAAAGCTTTGGAAAT
TATGAGCTTCAAGTTCAAATTACTCCTATGCTGGGATTATAA