Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400004981
CDS Infomation

pacid=37469122 polypeptide=PGSC0003DMP400003539 locus=PGSC0003DMG400001969 ID=PGSC0003DMT400004981.v4.03 annot-version=v4.03
Sequence

ATGGATGCTTTGTCTTCAACTTTCCTTTCTACATTATCACAACACCCCAAATCTCTTCTT
TCTCCTAATAATAATAATTATTATTATTATTCTCCTACTCTAAAAGTCTTCTCTGTTAGA
ATTGAAGAAAGACCACAAACAACCACTACTATAACAAAACCACAAGAAAAATCAACCCCT
TCACCACCAAAACCAACTCCAAAAAGAGAACCAATACCCTCAAGAAAACCTATTGAACCA
TCATTTCCCTCTTTTATCTTCAATGCATTCGATGATTTCGTAAATACTTTCATTGATCCT
CCGAGGAAATCGTCTGTTGATCCAAGGTATGTTCTCTCTAACAACTTCGCTCCAGTAGAC
GAACTTCCTCCTACTGAATGCGAAGTAGTGGAAGGCTCCCTTCCCTCTTGCCTAGATGGA
GCGTATATTAGAAATGGACCTAACCCTCAATATCTTCCACGTGGACCTTACCATCTTTTC
GACGGTGATGGAATGCTTCACTCTATTAAAATTTCCCAAGGTAAAGCTATGTTTTGTAGT
CGATTTGTCAAGACTTACAAATACAACATCGAAAATGAAGCTGGGTCCCCAATTATTCCT
AATGTGTTCTCCGGTTTCAACGGTCTTACAGCCTCGGCCGCGCGTGGTGCACTCACTGCG
GCCCGGGCTATTGCGGGACAGTTCAATCCCGCAAACGGTATAGGCCTTGCGAATACAAGC
TTGGCTTTATTTGGGGGAAAACTTTTCGCCCTCGGTGAATCTGATTTACCATATGAGGTA
AAAATAGCCCCAGATGGTGACGTTTTTACCCTCGGCCGTCACGATTTTAACGGAAACCTT
TTCATGAGCATGACGGCACATCCAAAAATCGACCCCGAAACTAACGAGGCTTTTGCTTTC
CGTTACGGCCCGATGCCTCCGTTTTTAAATTACTTTCGGGTCGACCCGAATGGTATAAAA
ACCCCGGATGTACCCATATTCTCCATGACCCGCCCGTCATTTCTACATGACTTTGCAATC
ACAAAAAAATACGCTATATTTTCGGACATACAAATTGGAATGAATCCAATTGAGTTACTC
ACCGGTGGTTCACCGGTGGGTACTGACTCGGGGAAAATTCCCCGAATTGGTGTGATACCA
CGTTACGCCAAGGATGAGTCGGAAATGAGGTGGTTTGATGTGCCAGGATTTAATATTGTA
CACGCGATCAACGCGTGGGATGAGGATGGAGGCGATACGATAGTGTTGATCGCGCCGAAT
ATATTATCGGTGGAACATACACTAGAGAGGATGGACATGATACATGCAAGTGTTGAGAAA
GTGAAAATAAATTTGAAGACAGGGATGGTGAGCAGACATCCAATTTCTACAAGAAATCTT
GATTTTGGAGTCATCAATCCAGCTTATGTTGGGAAAAAGAACAAGTATGTATATGCAGCC
ATTGGGGACCCTATGCCGAAAGTAATAGGGATAGCAAAATTAGACGTATCCGTAGCAGAA
GTTGATCGTCGCGATTGCATCGTGGCATGTCGTATATTTGGTGAAGGTTGCTATGGTGGT
GAACCATTTTTCGTGCCTAAAAATCCTTCAATCGATGAAGACGATGGCTACGTAGTGTCG
TATGTACACAATGAGAAGACAGGGGAATCGAACTTTTTGGTCATGGATGCAACATCACCT
AATCTTGACATTGTGGCTCATGTCAAATTGCCTCGTCGTGTGCCTTATGGTTTCCATGGA
CTTTTCGTGACGGAAAATGATCTTATGAAACTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400003539
PEP Infomation

pacid=37469122 transcript=PGSC0003DMT400004981 locus=PGSC0003DMG400001969 ID=PGSC0003DMT400004981.v4.03 annot-version=v4.03
Sequence

MDALSSTFLSTLSQHPKSLLSPNNNNYYYYSPTLKVFSVRIEERPQTTTTITKPQEKSTP
SPPKPTPKREPIPSRKPIEPSFPSFIFNAFDDFVNTFIDPPRKSSVDPRYVLSNNFAPVD
ELPPTECEVVEGSLPSCLDGAYIRNGPNPQYLPRGPYHLFDGDGMLHSIKISQGKAMFCS
RFVKTYKYNIENEAGSPIIPNVFSGFNGLTASAARGALTAARAIAGQFNPANGIGLANTS
LALFGGKLFALGESDLPYEVKIAPDGDVFTLGRHDFNGNLFMSMTAHPKIDPETNEAFAF
RYGPMPPFLNYFRVDPNGIKTPDVPIFSMTRPSFLHDFAITKKYAIFSDIQIGMNPIELL
TGGSPVGTDSGKIPRIGVIPRYAKDESEMRWFDVPGFNIVHAINAWDEDGGDTIVLIAPN
ILSVEHTLERMDMIHASVEKVKINLKTGMVSRHPISTRNLDFGVINPAYVGKKNKYVYAA
IGDPMPKVIGIAKLDVSVAEVDRRDCIVACRIFGEGCYGGEPFFVPKNPSIDEDDGYVVS
YVHNEKTGESNFLVMDATSPNLDIVAHVKLPRRVPYGFHGLFVTENDLMKL*

Transcript Sequence

Transcript ID

PGSC0003DMT400004981
Transcript Infomation

pacid=37469122 locus=PGSC0003DMG400001969 ID=PGSC0003DMT400004981.v4.03 annot-version=v4.03
Sequence

ATGGATGCTTTGTCTTCAACTTTCCTTTCTACATTATCACAACACCCCAAATCTCTTCTT
TCTCCTAATAATAATAATTATTATTATTATTCTCCTACTCTAAAAGTCTTCTCTGTTAGA
ATTGAAGAAAGACCACAAACAACCACTACTATAACAAAACCACAAGAAAAATCAACCCCT
TCACCACCAAAACCAACTCCAAAAAGAGAACCAATACCCTCAAGAAAACCTATTGAACCA
TCATTTCCCTCTTTTATCTTCAATGCATTCGATGATTTCGTAAATACTTTCATTGATCCT
CCGAGGAAATCGTCTGTTGATCCAAGGTATGTTCTCTCTAACAACTTCGCTCCAGTAGAC
GAACTTCCTCCTACTGAATGCGAAGTAGTGGAAGGCTCCCTTCCCTCTTGCCTAGATGGA
GCGTATATTAGAAATGGACCTAACCCTCAATATCTTCCACGTGGACCTTACCATCTTTTC
GACGGTGATGGAATGCTTCACTCTATTAAAATTTCCCAAGGTAAAGCTATGTTTTGTAGT
CGATTTGTCAAGACTTACAAATACAACATCGAAAATGAAGCTGGGTCCCCAATTATTCCT
AATGTGTTCTCCGGTTTCAACGGTCTTACAGCCTCGGCCGCGCGTGGTGCACTCACTGCG
GCCCGGGCTATTGCGGGACAGTTCAATCCCGCAAACGGTATAGGCCTTGCGAATACAAGC
TTGGCTTTATTTGGGGGAAAACTTTTCGCCCTCGGTGAATCTGATTTACCATATGAGGTA
AAAATAGCCCCAGATGGTGACGTTTTTACCCTCGGCCGTCACGATTTTAACGGAAACCTT
TTCATGAGCATGACGGCACATCCAAAAATCGACCCCGAAACTAACGAGGCTTTTGCTTTC
CGTTACGGCCCGATGCCTCCGTTTTTAAATTACTTTCGGGTCGACCCGAATGGTATAAAA
ACCCCGGATGTACCCATATTCTCCATGACCCGCCCGTCATTTCTACATGACTTTGCAATC
ACAAAAAAATACGCTATATTTTCGGACATACAAATTGGAATGAATCCAATTGAGTTACTC
ACCGGTGGTTCACCGGTGGGTACTGACTCGGGGAAAATTCCCCGAATTGGTGTGATACCA
CGTTACGCCAAGGATGAGTCGGAAATGAGGTGGTTTGATGTGCCAGGATTTAATATTGTA
CACGCGATCAACGCGTGGGATGAGGATGGAGGCGATACGATAGTGTTGATCGCGCCGAAT
ATATTATCGGTGGAACATACACTAGAGAGGATGGACATGATACATGCAAGTGTTGAGAAA
GTGAAAATAAATTTGAAGACAGGGATGGTGAGCAGACATCCAATTTCTACAAGAAATCTT
GATTTTGGAGTCATCAATCCAGCTTATGTTGGGAAAAAGAACAAGTATGTATATGCAGCC
ATTGGGGACCCTATGCCGAAAGTAATAGGGATAGCAAAATTAGACGTATCCGTAGCAGAA
GTTGATCGTCGCGATTGCATCGTGGCATGTCGTATATTTGGTGAAGGTTGCTATGGTGGT
GAACCATTTTTCGTGCCTAAAAATCCTTCAATCGATGAAGACGATGGCTACGTAGTGTCG
TATGTACACAATGAGAAGACAGGGGAATCGAACTTTTTGGTCATGGATGCAACATCACCT
AATCTTGACATTGTGGCTCATGTCAAATTGCCTCGTCGTGTGCCTTATGGTTTCCATGGA
CTTTTCGTGACGGAAAATGATCTTATGAAACTATAA