Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400004973
CDS Infomation

pacid=37467918 polypeptide=PGSC0003DMP400003531 locus=PGSC0003DMG400001967 ID=PGSC0003DMT400004973.v4.03 annot-version=v4.03
Sequence

ATGCCTCTTCATTGTGTAGCACCAAAACCAGAAAACTTTGGCACAGAATTGATGGCACCT
CCACCTAATTCGTCGAAGCCAGAGATGAAGAACTCAGAGTCCTTTATACAAAGGGCCTTG
TTTCCCATAACTTTGAAGTTTGAAGAAGTTGTTTACAAGATTAAGCAAGAAACAAAAGGA
ATGTGTTGTGGAGGACCATCAAGCACAAAAGAAAAGACTATACTAAATGGAGTGACAGGT
ATTGTGTGCCCAGGGGAGATGCTAGCAATGTTAGGTCCATCAGGTAGTGGAAAAACTACC
CTCCTAACGGCTTTAGGAGGCCGCCTATCGGGTAAGCTATCAGGGAAAATTACATACAAC
AGCCAGCCATTCTCAGGAGCTATCAAACGCCGTACTGGATTCGTGGCACAGGATGATGTC
CTATATCCTCATCTAACTGTAACAGAAACTCTCCTCTTCACAGCTCTGTTAAGGCTTCCC
CAAAGCCTAAGCAGGGAGGAAAAAGAAAGGCATGTGGAGCATGTTATAGCAGAGCTCGGG
TTAAACAAGTGTCGAAACAGCATGATAGGAGGACCATTATTTAGAGGGATATCAGGTGGG
GAGAAAAAGAGGGTCAGTATTGGTCAAGAAATGCTCATTAACCCGAGTTTACTACTGCTA
GATGAGCCTACTTCTGGTTTGGATTCTACTACAGCTCTGAGGATTCTAACTACTATTAAG
CGCCTAGCTGACGGTGGCAGAACTGTGATCACTACAATCCACCAACCATCCAGCAGGCTC
TACCATATGTTTGATAAGGTGGTCTTGCTTTCTGAAGGCTGCCCTATCTACTATGGTCCT
GCATCAACCGCCCTCGAGTACTTCTCCTCTGTTGGTTTTTCCACATCAATTACTATCAAT
CCTGCTGATCTCTTGCTTGATCTTGCCAATGGAATTGGACCTGATTCCAAGCATGCAATT
GAGCAAGGTGACAGTAGTGAACAGGAGAAGAAATCTGTAAGAGAAGCTCTCATCTCTGCT
TATGACAAGAACATTTCTACAAGGCTGAAAACTGAGCTATGCAGTTCAGATACCAATAAC
TACAGTTACGCAAAGGATGTTTCAACAAGAAACGGTGTGAAGTCAGAGCACTGGTGCACG
AGTTGGGGCTATCAATTTAAGGTGCTGCTACTAAGGGGGCTGAAGGAACGAAGATACGAA
ACCTTCAACAAGCTTAGAATCTTCCAAGTTGTTAGTGTAGCATTTCTTGCTGGATTGTTA
TGGTGGCACACTCCAACATCCCACATTGAAGACAGAATTGCAATGGTATTCTTCTTCGCG
GTATTCTGGGGCTTCTATCCACTCTACAATGCAGTTTTCACTTTTCCCCAAGAAAGAAGG
ATGCTCATCAAAGAGCGATCATCAGGAATGTACCGACTCTCATCATATTTTCTAGCTAAA
ACTGTTGGGGATCTTCCCTTGGAACTAGCACTACCAACAGCATTTACCTTCATCCTATAT
TGGATGGGTGGGCTCAAAGCCAACCCTGCCACATTCATCCTATCTCTTCTAGTAGTCCTT
TACAGCGTACTCGTTTCTCAGAGCCTCGGTCTAGCATATGGTGCCATGCTCATGGATGTG
AAACAGGCCACTACCTTAGCATCAGTCACAACTTTAGTCTTCCTAATTGCCGGAGGATAT
TACATTCAACAAATTCCCCCTTTCATAGTCTGGTTAAAATATTTGAGCTACAGCTACTAC
TGCTACAAGTTGCTTCTAGGGGTACAATACAATGATAACGACTACTACGAGTGTTCAAAA
GGCGTCTATTGCCAGGTTGCAGAATTTCCAGCCATAAAATCAATAGGCCTGAACAATATG
TGGATGGATGTATTCATCATGGCTCTAATGTTAGTGGGATACCGGCTAATCGCTTATCTA
GCACTCAATCGTGTGCGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400003531
PEP Infomation

pacid=37467918 transcript=PGSC0003DMT400004973 locus=PGSC0003DMG400001967 ID=PGSC0003DMT400004973.v4.03 annot-version=v4.03
Sequence

MPLHCVAPKPENFGTELMAPPPNSSKPEMKNSESFIQRALFPITLKFEEVVYKIKQETKG
MCCGGPSSTKEKTILNGVTGIVCPGEMLAMLGPSGSGKTTLLTALGGRLSGKLSGKITYN
SQPFSGAIKRRTGFVAQDDVLYPHLTVTETLLFTALLRLPQSLSREEKERHVEHVIAELG
LNKCRNSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTALRILTTIK
RLADGGRTVITTIHQPSSRLYHMFDKVVLLSEGCPIYYGPASTALEYFSSVGFSTSITIN
PADLLLDLANGIGPDSKHAIEQGDSSEQEKKSVREALISAYDKNISTRLKTELCSSDTNN
YSYAKDVSTRNGVKSEHWCTSWGYQFKVLLLRGLKERRYETFNKLRIFQVVSVAFLAGLL
WWHTPTSHIEDRIAMVFFFAVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLAK
TVGDLPLELALPTAFTFILYWMGGLKANPATFILSLLVVLYSVLVSQSLGLAYGAMLMDV
KQATTLASVTTLVFLIAGGYYIQQIPPFIVWLKYLSYSYYCYKLLLGVQYNDNDYYECSK
GVYCQVAEFPAIKSIGLNNMWMDVFIMALMLVGYRLIAYLALNRVR*

Transcript Sequence

Transcript ID

PGSC0003DMT400004973
Transcript Infomation

pacid=37467918 locus=PGSC0003DMG400001967 ID=PGSC0003DMT400004973.v4.03 annot-version=v4.03
Sequence

ATGCCTCTTCATTGTGTAGCACCAAAACCAGAAAACTTTGGCACAGAATTGATGGCACCT
CCACCTAATTCGTCGAAGCCAGAGATGAAGAACTCAGAGTCCTTTATACAAAGGGCCTTG
TTTCCCATAACTTTGAAGTTTGAAGAAGTTGTTTACAAGATTAAGCAAGAAACAAAAGGA
ATGTGTTGTGGAGGACCATCAAGCACAAAAGAAAAGACTATACTAAATGGAGTGACAGGT
ATTGTGTGCCCAGGGGAGATGCTAGCAATGTTAGGTCCATCAGGTAGTGGAAAAACTACC
CTCCTAACGGCTTTAGGAGGCCGCCTATCGGGTAAGCTATCAGGGAAAATTACATACAAC
AGCCAGCCATTCTCAGGAGCTATCAAACGCCGTACTGGATTCGTGGCACAGGATGATGTC
CTATATCCTCATCTAACTGTAACAGAAACTCTCCTCTTCACAGCTCTGTTAAGGCTTCCC
CAAAGCCTAAGCAGGGAGGAAAAAGAAAGGCATGTGGAGCATGTTATAGCAGAGCTCGGG
TTAAACAAGTGTCGAAACAGCATGATAGGAGGACCATTATTTAGAGGGATATCAGGTGGG
GAGAAAAAGAGGGTCAGTATTGGTCAAGAAATGCTCATTAACCCGAGTTTACTACTGCTA
GATGAGCCTACTTCTGGTTTGGATTCTACTACAGCTCTGAGGATTCTAACTACTATTAAG
CGCCTAGCTGACGGTGGCAGAACTGTGATCACTACAATCCACCAACCATCCAGCAGGCTC
TACCATATGTTTGATAAGGTGGTCTTGCTTTCTGAAGGCTGCCCTATCTACTATGGTCCT
GCATCAACCGCCCTCGAGTACTTCTCCTCTGTTGGTTTTTCCACATCAATTACTATCAAT
CCTGCTGATCTCTTGCTTGATCTTGCCAATGGAATTGGACCTGATTCCAAGCATGCAATT
GAGCAAGGTGACAGTAGTGAACAGGAGAAGAAATCTGTAAGAGAAGCTCTCATCTCTGCT
TATGACAAGAACATTTCTACAAGGCTGAAAACTGAGCTATGCAGTTCAGATACCAATAAC
TACAGTTACGCAAAGGATGTTTCAACAAGAAACGGTGTGAAGTCAGAGCACTGGTGCACG
AGTTGGGGCTATCAATTTAAGGTGCTGCTACTAAGGGGGCTGAAGGAACGAAGATACGAA
ACCTTCAACAAGCTTAGAATCTTCCAAGTTGTTAGTGTAGCATTTCTTGCTGGATTGTTA
TGGTGGCACACTCCAACATCCCACATTGAAGACAGAATTGCAATGGTATTCTTCTTCGCG
GTATTCTGGGGCTTCTATCCACTCTACAATGCAGTTTTCACTTTTCCCCAAGAAAGAAGG
ATGCTCATCAAAGAGCGATCATCAGGAATGTACCGACTCTCATCATATTTTCTAGCTAAA
ACTGTTGGGGATCTTCCCTTGGAACTAGCACTACCAACAGCATTTACCTTCATCCTATAT
TGGATGGGTGGGCTCAAAGCCAACCCTGCCACATTCATCCTATCTCTTCTAGTAGTCCTT
TACAGCGTACTCGTTTCTCAGAGCCTCGGTCTAGCATATGGTGCCATGCTCATGGATGTG
AAACAGGCCACTACCTTAGCATCAGTCACAACTTTAGTCTTCCTAATTGCCGGAGGATAT
TACATTCAACAAATTCCCCCTTTCATAGTCTGGTTAAAATATTTGAGCTACAGCTACTAC
TGCTACAAGTTGCTTCTAGGGGTACAATACAATGATAACGACTACTACGAGTGTTCAAAA
GGCGTCTATTGCCAGGTTGCAGAATTTCCAGCCATAAAATCAATAGGCCTGAACAATATG
TGGATGGATGTATTCATCATGGCTCTAATGTTAGTGGGATACCGGCTAATCGCTTATCTA
GCACTCAATCGTGTGCGATGA