Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400004963
CDS Infomation

pacid=37469370 polypeptide=PGSC0003DMP400003524 locus=PGSC0003DMG400001963 ID=PGSC0003DMT400004963.v4.03 annot-version=v4.03
Sequence

ATGGCAATCTTCGACGATGAAGATGAACCACTTGTTCAATTTCTTGAATCGGAGATCTTC
ACTCTCTCCGATCAGGATGAAGAGATCGTAGAGGATATCATGGACGAAGGTGATGTAAAG
AGGAAAGGTAAGCGCCTTAAAGTTGAAGATGGTAACGATGGATTTGAAGGAGAGGAGGAG
CGAGTAACAAAGAAAATGAGAGTTCTGGAGGATGAGGATGAGTCTGAGTATGAGGATGAG
ATTGAGGGAAAGGAGAAGAGGGAACAAGATGAGGAGGAGGAGGAAGAGAAGAGGGAAGCA
AAGGTAATGAAAATTGAGGAGGAGGAGGAAGACGAGGAGGAAAAGGTGAAGGCATTACTA
TCATCTCCATCTTTGTCAGCACCAGCTGAAGTTGAATGTGCATCCTCACCTCCAAGGATG
AGTCAGAGTGTCATGGATAATAATAACAGTGTTGCTTATATAAGCGACAACATGAGGCAG
GTCCCAAGTAGAATAGAGACGGGGATTCTCAGCAAAGTCCCTCCAGAATTGCTCCGTCAC
ATCCTCAAGTTCCTCTCACCAGAGGATCTTGTGGCATGTACAATGGTCTGCAAGTTTTTA
AATTTTGCTGCTTCTGATGAATCCTTGTGGCGCTGGCTGTATCGGATGCGATGGGGTCTG
TTGCTCCCAACTAGAAAGCCACGCGACTGTGCTTGGAAGAAGCTTTACATCCAGCGTGAT
GCAGATGATATGATGGAGTTTGTCAGGAATACTCCTATGGAATTTAAGGAGTATTACATC
CAAATGCAGGCAGCAAAAAGAAGCCAAGCTCCTCCTCCGTCTGAGGTAAATGATGACCGA
ATAATTCTTGATAAGACAGTTGCTGATCAAGTCTCTACTTGGAAGAAAAGCAAAGGTCTG
GGTGATAAAGTGGTGATTGATCATGTGTGCTCTGGGGAGACGTGCACTTACTATCAAATA
GGAGATGTATATGTTTGTGAGAAAACTGGATATGTCCATGTTTGTGATGACACATGTAGG
GAAGCTGTATCTGATCCTATAAATGGTCTTCTGGTGTGTACCATTTCAGGCCACTGTTTT
GATAGGATGTTGTCACCTTCCGAAATGGAACTAGATGGGGAGCAGCAACAAGTTGGCACT
ACAGATGAAGCAGAGCCATTCATGGGATCGGGTCGTTTTGCTCGAGCTTATTTACTGGGA
TATAACTGTGACGATGAGAAAGAACTAGAAGATGCTTTGCGCTTTTGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400003524
PEP Infomation

pacid=37469370 transcript=PGSC0003DMT400004963 locus=PGSC0003DMG400001963 ID=PGSC0003DMT400004963.v4.03 annot-version=v4.03
Sequence

MAIFDDEDEPLVQFLESEIFTLSDQDEEIVEDIMDEGDVKRKGKRLKVEDGNDGFEGEEE
RVTKKMRVLEDEDESEYEDEIEGKEKREQDEEEEEEKREAKVMKIEEEEEDEEEKVKALL
SSPSLSAPAEVECASSPPRMSQSVMDNNNSVAYISDNMRQVPSRIETGILSKVPPELLRH
ILKFLSPEDLVACTMVCKFLNFAASDESLWRWLYRMRWGLLLPTRKPRDCAWKKLYIQRD
ADDMMEFVRNTPMEFKEYYIQMQAAKRSQAPPPSEVNDDRIILDKTVADQVSTWKKSKGL
GDKVVIDHVCSGETCTYYQIGDVYVCEKTGYVHVCDDTCREAVSDPINGLLVCTISGHCF
DRMLSPSEMELDGEQQQVGTTDEAEPFMGSGRFARAYLLGYNCDDEKELEDALRFC*

Transcript Sequence

Transcript ID

PGSC0003DMT400004963
Transcript Infomation

pacid=37469370 locus=PGSC0003DMG400001963 ID=PGSC0003DMT400004963.v4.03 annot-version=v4.03
Sequence

ATGGCAATCTTCGACGATGAAGATGAACCACTTGTTCAATTTCTTGAATCGGAGATCTTC
ACTCTCTCCGATCAGGATGAAGAGATCGTAGAGGATATCATGGACGAAGGTGATGTAAAG
AGGAAAGGTAAGCGCCTTAAAGTTGAAGATGGTAACGATGGATTTGAAGGAGAGGAGGAG
CGAGTAACAAAGAAAATGAGAGTTCTGGAGGATGAGGATGAGTCTGAGTATGAGGATGAG
ATTGAGGGAAAGGAGAAGAGGGAACAAGATGAGGAGGAGGAGGAAGAGAAGAGGGAAGCA
AAGGTAATGAAAATTGAGGAGGAGGAGGAAGACGAGGAGGAAAAGGTGAAGGCATTACTA
TCATCTCCATCTTTGTCAGCACCAGCTGAAGTTGAATGTGCATCCTCACCTCCAAGGATG
AGTCAGAGTGTCATGGATAATAATAACAGTGTTGCTTATATAAGCGACAACATGAGGCAG
GTCCCAAGTAGAATAGAGACGGGGATTCTCAGCAAAGTCCCTCCAGAATTGCTCCGTCAC
ATCCTCAAGTTCCTCTCACCAGAGGATCTTGTGGCATGTACAATGGTCTGCAAGTTTTTA
AATTTTGCTGCTTCTGATGAATCCTTGTGGCGCTGGCTGTATCGGATGCGATGGGGTCTG
TTGCTCCCAACTAGAAAGCCACGCGACTGTGCTTGGAAGAAGCTTTACATCCAGCGTGAT
GCAGATGATATGATGGAGTTTGTCAGGAATACTCCTATGGAATTTAAGGAGTATTACATC
CAAATGCAGGCAGCAAAAAGAAGCCAAGCTCCTCCTCCGTCTGAGGTAAATGATGACCGA
ATAATTCTTGATAAGACAGTTGCTGATCAAGTCTCTACTTGGAAGAAAAGCAAAGGTCTG
GGTGATAAAGTGGTGATTGATCATGTGTGCTCTGGGGAGACGTGCACTTACTATCAAATA
GGAGATGTATATGTTTGTGAGAAAACTGGATATGTCCATGTTTGTGATGACACATGTAGG
GAAGCTGTATCTGATCCTATAAATGGTCTTCTGGTGTGTACCATTTCAGGCCACTGTTTT
GATAGGATGTTGTCACCTTCCGAAATGGAACTAGATGGGGAGCAGCAACAAGTTGGCACT
ACAGATGAAGCAGAGCCATTCATGGGATCGGGTCGTTTTGCTCGAGCTTATTTACTGGGA
TATAACTGTGACGATGAGAAAGAACTAGAAGATGCTTTGCGCTTTTGCTGA