Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400004867
CDS Infomation

pacid=37430236 polypeptide=PGSC0003DMP400003450 locus=PGSC0003DMG400001934 ID=PGSC0003DMT400004867.v4.03 annot-version=v4.03
Sequence

ATGGATAACAACTTTTCTGGAGAAGACAATGACAACATTGACTGGGATACTGAAGATGAA
TTAGAAATACAAGAAATACCGGACGCAACATTTTCCTCGTGCACAAATTTAAGAAATGTT
GGACATCATACTGTTAGTGGTCATGGGGAGGCAAGCTCATCATCAGTACCCTGTCAATCC
AAGTTCATTCAACAATTTATTGTGATGGGATTTCCTGAAGAATCTATTGCAAAAGCGATA
GAGCAAAATGGAGAAAATGAAGGTTTGGTGCTAGATGCTCTTTTGACATTCAAGGCACTT
GAAGATTCTCCTGAAGAACAGCCTAGTACGAGTGCACAGATGGAACCCAGCATTAGTTCT
GATGATAGCTCTTCTCAATGCAACGAGAACGTTTTGGATGATGTTTATGAAGATGATAGT
TGGTCCTCGGACTCGGACAATTGTATGAATTCTGCTAAACAGACTTACTTGAATGACGAC
AACAGTTCTTTGTCTGAAAACGAGAATTCATTATTATTCCTAGCAAATATGGGATACCCC
GCGGAGGAGGCTTCCATAGCGATGGAGAGATGTGGTCCAGAAGCATCGTTTTCGGAGTTG
ATAGATTTCATGTGTGCTGCTCAAATGGCAAGAGAAGAAGACGTCTATCTGCCCGAAGAT
GAAAAGCCAAAACTAAATAGTGGTGGATACAAGAGGAAGATGTATAATGAACTTCCCGTA
AGGAAAAAGCAAAGGGCGATTACAGATGAAGAGCCAATTCATTTGCCCAGACCTATGATC
GGATTCGGGGTTCCTACGGAATCCTTACCAGCTATAGTGCAAAGAACTCTGCCAGAGCAA
GCTATTGGCCCCCCTTTTTTCTATTATGAAAATGTTGCTCTTGCTCCAAAGGGTGTGTGG
GACACCATGTCAAGATTCCTTTACGATGTTGAGCCCGAGTTTGTTGACTCGAAATATTTT
TGCGCTACCGCAAGGAAAAGGGGATATATTCATAATCTACCAATTGAAGATAGATTTCCT
TTACTTCCACTTCCTCCACGTACCATTCATGAGGCGTTTCCTCTAACGAAGAAATGGTGG
CCATCTTGGGATACACGAACAAAGTTAAATTGTTTGCAAACATCTATTGGGAGTGCAAGG
TTAGCTGATAGAATCAGGAAAGCTATGAAAGCGATGGAGAACTTCGATGGTGAGCCACCG
TTGATGGTGCAAAAGTATGTTCTAGATGAATGTCGGAAGTGGAATTTGCTGTGGGTTGGT
AGAAACAAAGCTTCTCCTCTGGAGACTGATGAATTTGAAATGCTAATGGGATTTCCACGG
AATCATACCCGTGGAGGCGGTATAAGTAGGACCGATAGATACAAGTCGCTTGGTAACGCG
TTCCAGGTCGACACAGTGGCATACCATTTATCGGTGTTGAAAGACTTGTATCCAAATGGT
ATCAATGTTTTATCACTATTTTCTGGAATTGGTGGTGCTGAAGTTGCTCTATATCGTCTC
GGTATTCCATTGAACAATGTGGTTTCCGTAGAGATATCTGAAGTGAACAGGAATATTCTG
AGAAGCTGGTGGGAGCAAACAAATCAAAAGGGGAATCTTATAGATTTCAATGATATACAG
CAGCTGAACGGAGACGTCTTGGAGCAAATGATCGATTCATTTGGAGGATTCGATTTAGTA
ATTGGAGGAAGCCCGTGCAACAACCTTACTGGAAGTAACAGAGTGACTCGAGATGGACTC
GAAGGTAAAGATTCTTCTCTATTTTATGACTATGTTCGGATAGTGGACTTGGTCAAATCC
ATAATGTCTAATCGTAGAGTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400003450
PEP Infomation

pacid=37430236 transcript=PGSC0003DMT400004867 locus=PGSC0003DMG400001934 ID=PGSC0003DMT400004867.v4.03 annot-version=v4.03
Sequence

MDNNFSGEDNDNIDWDTEDELEIQEIPDATFSSCTNLRNVGHHTVSGHGEASSSSVPCQS
KFIQQFIVMGFPEESIAKAIEQNGENEGLVLDALLTFKALEDSPEEQPSTSAQMEPSISS
DDSSSQCNENVLDDVYEDDSWSSDSDNCMNSAKQTYLNDDNSSLSENENSLLFLANMGYP
AEEASIAMERCGPEASFSELIDFMCAAQMAREEDVYLPEDEKPKLNSGGYKRKMYNELPV
RKKQRAITDEEPIHLPRPMIGFGVPTESLPAIVQRTLPEQAIGPPFFYYENVALAPKGVW
DTMSRFLYDVEPEFVDSKYFCATARKRGYIHNLPIEDRFPLLPLPPRTIHEAFPLTKKWW
PSWDTRTKLNCLQTSIGSARLADRIRKAMKAMENFDGEPPLMVQKYVLDECRKWNLLWVG
RNKASPLETDEFEMLMGFPRNHTRGGGISRTDRYKSLGNAFQVDTVAYHLSVLKDLYPNG
INVLSLFSGIGGAEVALYRLGIPLNNVVSVEISEVNRNILRSWWEQTNQKGNLIDFNDIQ
QLNGDVLEQMIDSFGGFDLVIGGSPCNNLTGSNRVTRDGLEGKDSSLFYDYVRIVDLVKS
IMSNRRV*

Transcript Sequence

Transcript ID

PGSC0003DMT400004867
Transcript Infomation

pacid=37430236 locus=PGSC0003DMG400001934 ID=PGSC0003DMT400004867.v4.03 annot-version=v4.03
Sequence

ATGGATAACAACTTTTCTGGAGAAGACAATGACAACATTGACTGGGATACTGAAGATGAA
TTAGAAATACAAGAAATACCGGACGCAACATTTTCCTCGTGCACAAATTTAAGAAATGTT
GGACATCATACTGTTAGTGGTCATGGGGAGGCAAGCTCATCATCAGTACCCTGTCAATCC
AAGTTCATTCAACAATTTATTGTGATGGGATTTCCTGAAGAATCTATTGCAAAAGCGATA
GAGCAAAATGGAGAAAATGAAGGTTTGGTGCTAGATGCTCTTTTGACATTCAAGGCACTT
GAAGATTCTCCTGAAGAACAGCCTAGTACGAGTGCACAGATGGAACCCAGCATTAGTTCT
GATGATAGCTCTTCTCAATGCAACGAGAACGTTTTGGATGATGTTTATGAAGATGATAGT
TGGTCCTCGGACTCGGACAATTGTATGAATTCTGCTAAACAGACTTACTTGAATGACGAC
AACAGTTCTTTGTCTGAAAACGAGAATTCATTATTATTCCTAGCAAATATGGGATACCCC
GCGGAGGAGGCTTCCATAGCGATGGAGAGATGTGGTCCAGAAGCATCGTTTTCGGAGTTG
ATAGATTTCATGTGTGCTGCTCAAATGGCAAGAGAAGAAGACGTCTATCTGCCCGAAGAT
GAAAAGCCAAAACTAAATAGTGGTGGATACAAGAGGAAGATGTATAATGAACTTCCCGTA
AGGAAAAAGCAAAGGGCGATTACAGATGAAGAGCCAATTCATTTGCCCAGACCTATGATC
GGATTCGGGGTTCCTACGGAATCCTTACCAGCTATAGTGCAAAGAACTCTGCCAGAGCAA
GCTATTGGCCCCCCTTTTTTCTATTATGAAAATGTTGCTCTTGCTCCAAAGGGTGTGTGG
GACACCATGTCAAGATTCCTTTACGATGTTGAGCCCGAGTTTGTTGACTCGAAATATTTT
TGCGCTACCGCAAGGAAAAGGGGATATATTCATAATCTACCAATTGAAGATAGATTTCCT
TTACTTCCACTTCCTCCACGTACCATTCATGAGGCGTTTCCTCTAACGAAGAAATGGTGG
CCATCTTGGGATACACGAACAAAGTTAAATTGTTTGCAAACATCTATTGGGAGTGCAAGG
TTAGCTGATAGAATCAGGAAAGCTATGAAAGCGATGGAGAACTTCGATGGTGAGCCACCG
TTGATGGTGCAAAAGTATGTTCTAGATGAATGTCGGAAGTGGAATTTGCTGTGGGTTGGT
AGAAACAAAGCTTCTCCTCTGGAGACTGATGAATTTGAAATGCTAATGGGATTTCCACGG
AATCATACCCGTGGAGGCGGTATAAGTAGGACCGATAGATACAAGTCGCTTGGTAACGCG
TTCCAGGTCGACACAGTGGCATACCATTTATCGGTGTTGAAAGACTTGTATCCAAATGGT
ATCAATGTTTTATCACTATTTTCTGGAATTGGTGGTGCTGAAGTTGCTCTATATCGTCTC
GGTATTCCATTGAACAATGTGGTTTCCGTAGAGATATCTGAAGTGAACAGGAATATTCTG
AGAAGCTGGTGGGAGCAAACAAATCAAAAGGGGAATCTTATAGATTTCAATGATATACAG
CAGCTGAACGGAGACGTCTTGGAGCAAATGATCGATTCATTTGGAGGATTCGATTTAGTA
ATTGGAGGAAGCCCGTGCAACAACCTTACTGGAAGTAACAGAGTGACTCGAGATGGACTC
GAAGGTAAAGATTCTTCTCTATTTTATGACTATGTTCGGATAGTGGACTTGGTCAAATCC
ATAATGTCTAATCGTAGAGTGTGA