Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400004861
CDS Infomation

pacid=37430513 polypeptide=PGSC0003DMP400003446 locus=PGSC0003DMG400001932 ID=PGSC0003DMT400004861.v4.03 annot-version=v4.03
Sequence

ATGGCTACACCGACAAGAATTGGTCTTGCTGGGCTTGCTGTTATGGGACAAAATCTTGCT
CTCAATATTGCTGAGAAAGGATTTCCTATATCTGTTTACAACCGATCCACTTCAAAAGTT
GATGAGACCGTTGAACGAGCTAAAAAGGAAGGCAATCTTCCTCTTTATGGCTTTCATGAT
CCAGAGTCCTTTGTACTTTCTATCCAAAAGCCCCGTGTCATAATCATTCTTGTCAAGGCT
GGTTTACCAGTTGATCAGACCATCAAAACCCTTTCAGCTTTCATGGATAAAGGAGACTGT
ATCATTGATGGTGGCAATGAATGGTATGAAAACACTGAGAGGAGAGAAAAAGAAATGGCT
GAGCTTGGTCTTCTTTATCTTGGAATGGGAGTATCAGGTGGCGAAGAAGGTGCACGCAAT
GGACCCTCAATGATGCCTGGAGGTTCTTTTGAAGCCTACAAATACATCGAGGACATCTTA
CTAAAGGTTGCAGCTCAAGTTCCTGACAGTGGCCCTTGTGTAACATACATTGGTGAAGGA
GGTTCTGGAAATTTTGTTAAGATGGTTCATAATGGAATTGAATATGGTGACATGCAGTTA
ATTGCAGAGGCTTACGATGTACTAAGATCTGTCGGCAAGCTCTCTAACGCTGAATTACAT
CAAGTCTTCTCAGAGTGGAACAAAGGAGAGCTTTTGAGCTTCTTGATTGAAATCACTGCT
GATATATTTGGAGTCAAGGATGATAAAGCAGACGGGTATTTGGTGGACAAAGTTTTGGAT
AAAACTGGGATGAAAGGTACTGGTAAATGGACTGTTCAGCAAGCCGCTGAATTGTCAGTT
GCTGCACCTACAATAGCTGCATCATTGGATTCAAGATTCCTTAGTGGGTTAAAAGATGAA
AGAGTTCAAGCAGCCAAAGTATTTGAATCTAGCGGGGTTAGTGATATCTTTGTTGAGCAG
ACCGTGGACAAGAATCAATTGATTGACGATGTGAGAAAGGCACTTTATGCATCCAAAATA
TGTAGCTATGCTCAAGGCATGAATTTGATAAGGGCAAAGAGTGTTGAAAAAGGATGGGAC
TTGAAACTAGGGGAGCTTGCTAGGATTTGGAAGGGTGGTTGTATTATCCGTGCTATATTT
TTGGACCGGATCAAGGGGGCTTATGACAGAAACCCAGATCTTGCTAACCTACTCGTGGAT
GAGGAGTTTGCAAAAGAGATGGTTGAACGTCAGTCTGCTTGGCGAAGAGTAGTCTGCCTA
GCTATAAACTCAGGCATTAGCACACCGGGTATGTCTTCAAGTCTTGCTTACTTTGACTCA
TACAGGAGGGAAAGTCTTCCTGCCAATTTGGTTCAGGCTCAAAGGGATTACTTCGGTGCT
CATACTTACGAGAGGATTGATGTGCCAGGGGCTTTCCATACTGAGTGGTTCAAGATTGCC
AAACAGTCGAAGAACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400003446
PEP Infomation

pacid=37430513 transcript=PGSC0003DMT400004861 locus=PGSC0003DMG400001932 ID=PGSC0003DMT400004861.v4.03 annot-version=v4.03
Sequence

MATPTRIGLAGLAVMGQNLALNIAEKGFPISVYNRSTSKVDETVERAKKEGNLPLYGFHD
PESFVLSIQKPRVIIILVKAGLPVDQTIKTLSAFMDKGDCIIDGGNEWYENTERREKEMA
ELGLLYLGMGVSGGEEGARNGPSMMPGGSFEAYKYIEDILLKVAAQVPDSGPCVTYIGEG
GSGNFVKMVHNGIEYGDMQLIAEAYDVLRSVGKLSNAELHQVFSEWNKGELLSFLIEITA
DIFGVKDDKADGYLVDKVLDKTGMKGTGKWTVQQAAELSVAAPTIAASLDSRFLSGLKDE
RVQAAKVFESSGVSDIFVEQTVDKNQLIDDVRKALYASKICSYAQGMNLIRAKSVEKGWD
LKLGELARIWKGGCIIRAIFLDRIKGAYDRNPDLANLLVDEEFAKEMVERQSAWRRVVCL
AINSGISTPGMSSSLAYFDSYRRESLPANLVQAQRDYFGAHTYERIDVPGAFHTEWFKIA
KQSKN*

Transcript Sequence

Transcript ID

PGSC0003DMT400004861
Transcript Infomation

pacid=37430513 locus=PGSC0003DMG400001932 ID=PGSC0003DMT400004861.v4.03 annot-version=v4.03
Sequence

ATGGCTACACCGACAAGAATTGGTCTTGCTGGGCTTGCTGTTATGGGACAAAATCTTGCT
CTCAATATTGCTGAGAAAGGATTTCCTATATCTGTTTACAACCGATCCACTTCAAAAGTT
GATGAGACCGTTGAACGAGCTAAAAAGGAAGGCAATCTTCCTCTTTATGGCTTTCATGAT
CCAGAGTCCTTTGTACTTTCTATCCAAAAGCCCCGTGTCATAATCATTCTTGTCAAGGCT
GGTTTACCAGTTGATCAGACCATCAAAACCCTTTCAGCTTTCATGGATAAAGGAGACTGT
ATCATTGATGGTGGCAATGAATGGTATGAAAACACTGAGAGGAGAGAAAAAGAAATGGCT
GAGCTTGGTCTTCTTTATCTTGGAATGGGAGTATCAGGTGGCGAAGAAGGTGCACGCAAT
GGACCCTCAATGATGCCTGGAGGTTCTTTTGAAGCCTACAAATACATCGAGGACATCTTA
CTAAAGGTTGCAGCTCAAGTTCCTGACAGTGGCCCTTGTGTAACATACATTGGTGAAGGA
GGTTCTGGAAATTTTGTTAAGATGGTTCATAATGGAATTGAATATGGTGACATGCAGTTA
ATTGCAGAGGCTTACGATGTACTAAGATCTGTCGGCAAGCTCTCTAACGCTGAATTACAT
CAAGTCTTCTCAGAGTGGAACAAAGGAGAGCTTTTGAGCTTCTTGATTGAAATCACTGCT
GATATATTTGGAGTCAAGGATGATAAAGCAGACGGGTATTTGGTGGACAAAGTTTTGGAT
AAAACTGGGATGAAAGGTACTGGTAAATGGACTGTTCAGCAAGCCGCTGAATTGTCAGTT
GCTGCACCTACAATAGCTGCATCATTGGATTCAAGATTCCTTAGTGGGTTAAAAGATGAA
AGAGTTCAAGCAGCCAAAGTATTTGAATCTAGCGGGGTTAGTGATATCTTTGTTGAGCAG
ACCGTGGACAAGAATCAATTGATTGACGATGTGAGAAAGGCACTTTATGCATCCAAAATA
TGTAGCTATGCTCAAGGCATGAATTTGATAAGGGCAAAGAGTGTTGAAAAAGGATGGGAC
TTGAAACTAGGGGAGCTTGCTAGGATTTGGAAGGGTGGTTGTATTATCCGTGCTATATTT
TTGGACCGGATCAAGGGGGCTTATGACAGAAACCCAGATCTTGCTAACCTACTCGTGGAT
GAGGAGTTTGCAAAAGAGATGGTTGAACGTCAGTCTGCTTGGCGAAGAGTAGTCTGCCTA
GCTATAAACTCAGGCATTAGCACACCGGGTATGTCTTCAAGTCTTGCTTACTTTGACTCA
TACAGGAGGGAAAGTCTTCCTGCCAATTTGGTTCAGGCTCAAAGGGATTACTTCGGTGCT
CATACTTACGAGAGGATTGATGTGCCAGGGGCTTTCCATACTGAGTGGTTCAAGATTGCC
AAACAGTCGAAGAACTGA