Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400004838
CDS Infomation

pacid=37430344 polypeptide=PGSC0003DMP400003426 locus=PGSC0003DMG400001921 ID=PGSC0003DMT400004838.v4.03 annot-version=v4.03
Sequence

ATGAACATCTTGTTTAATGCATGTTCTGCTGCAATTTTTACAAGGACTAGCAGACGTGCT
GTGAAGAGTTCAATTGGTGCATTTTCAGCTCTTTCATGGAAGACAGGTGTTGGATTTACT
GCAACCAGAAAAGTTGATTTCGACTTATTTTTTAAGCAAATTTGCGTTCGTTGCTATTCA
TCCAAAAAGTTTAGAGTGGAGAGTTCTAGCTCACAGAAGTCCGATCTTACTCCACAAATG
AAGGAAGATAGAGATGGTTTCTTTGTTGTTAGGAAAGGAAATCTGGTTGGAGTCTACAAA
AACTTGAGTGATTGTCAAACTCAAGTCGGATCCTCGATATGTGACCCCCCTGTAAGTGTG
TATAAAGGCTATGCTATGCCTAAGGACACAGAGGAATATCTTCTCTCTTGTGGGCTTAAA
AATGCTCTTTACTCTATCAGGGCTGCTGATCTTACTGAAGATCTCTTTGGGACCCTAGTA
CCATGCCCTTTTCAGCAACCTTCTTCTTCAAAAGGTGGAATTCCTGAACATATGACAAAG
AAGAGGTCACAGGATGTAATGTGGTCAGAATATACGGATGCTGCTGGATCAGCTGTAATT
TCGAATGATGATTCCCTAAGAAAGCATGTCAAGTTAGATGATCATAAGGGCGACCAAGCT
CTGCCATCTGGTCAGTCTTGTACTCTTGAATTTGATGGTGCTTCAAAAGGAAATCCTGGA
CTAGCTGGTGCAGGAGCTGTCCTGCGGGCTGATGATGGCAGTTTTATCTGTAGGCTACGT
GAAGGTTTAGGAGTAGCAACAAACAATGCTGCAGAATATCGAGCCATTATTTTGGGGTTG
AACTATGCACTTAGCAAAGGGTTTACAAGTATTCGGGTTCAGGGGGACTCCAAACTTGTT
TGTATGCAGATCCAGGGCCTATGGAAGGTTAAAAATCAAAACATCTCCACATTGTATGAG
CAGGCAAAACAACTGAAAGATAGATTTCTTTCTTTCCGGATCATTCATGTCCTTCGGGAG
TCAAACTCCGATGCAGATGCTCAGGCGAACATTGCTGTTGAACTTGCTAATGGTCAAATC
CAGGAGGAGATTGAGAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400003426
PEP Infomation

pacid=37430344 transcript=PGSC0003DMT400004838 locus=PGSC0003DMG400001921 ID=PGSC0003DMT400004838.v4.03 annot-version=v4.03
Sequence

MNILFNACSAAIFTRTSRRAVKSSIGAFSALSWKTGVGFTATRKVDFDLFFKQICVRCYS
SKKFRVESSSSQKSDLTPQMKEDRDGFFVVRKGNLVGVYKNLSDCQTQVGSSICDPPVSV
YKGYAMPKDTEEYLLSCGLKNALYSIRAADLTEDLFGTLVPCPFQQPSSSKGGIPEHMTK
KRSQDVMWSEYTDAAGSAVISNDDSLRKHVKLDDHKGDQALPSGQSCTLEFDGASKGNPG
LAGAGAVLRADDGSFICRLREGLGVATNNAAEYRAIILGLNYALSKGFTSIRVQGDSKLV
CMQIQGLWKVKNQNISTLYEQAKQLKDRFLSFRIIHVLRESNSDADAQANIAVELANGQI
QEEIEK*

Transcript Sequence

Transcript ID

PGSC0003DMT400004838
Transcript Infomation

pacid=37430344 locus=PGSC0003DMG400001921 ID=PGSC0003DMT400004838.v4.03 annot-version=v4.03
Sequence

ATGAACATCTTGTTTAATGCATGTTCTGCTGCAATTTTTACAAGGACTAGCAGACGTGCT
GTGAAGAGTTCAATTGGTGCATTTTCAGCTCTTTCATGGAAGACAGGTGTTGGATTTACT
GCAACCAGAAAAGTTGATTTCGACTTATTTTTTAAGCAAATTTGCGTTCGTTGCTATTCA
TCCAAAAAGTTTAGAGTGGAGAGTTCTAGCTCACAGAAGTCCGATCTTACTCCACAAATG
AAGGAAGATAGAGATGGTTTCTTTGTTGTTAGGAAAGGAAATCTGGTTGGAGTCTACAAA
AACTTGAGTGATTGTCAAACTCAAGTCGGATCCTCGATATGTGACCCCCCTGTAAGTGTG
TATAAAGGCTATGCTATGCCTAAGGACACAGAGGAATATCTTCTCTCTTGTGGGCTTAAA
AATGCTCTTTACTCTATCAGGGCTGCTGATCTTACTGAAGATCTCTTTGGGACCCTAGTA
CCATGCCCTTTTCAGCAACCTTCTTCTTCAAAAGGTGGAATTCCTGAACATATGACAAAG
AAGAGGTCACAGGATGTAATGTGGTCAGAATATACGGATGCTGCTGGATCAGCTGTAATT
TCGAATGATGATTCCCTAAGAAAGCATGTCAAGTTAGATGATCATAAGGGCGACCAAGCT
CTGCCATCTGGTCAGTCTTGTACTCTTGAATTTGATGGTGCTTCAAAAGGAAATCCTGGA
CTAGCTGGTGCAGGAGCTGTCCTGCGGGCTGATGATGGCAGTTTTATCTGTAGGCTACGT
GAAGGTTTAGGAGTAGCAACAAACAATGCTGCAGAATATCGAGCCATTATTTTGGGGTTG
AACTATGCACTTAGCAAAGGGTTTACAAGTATTCGGGTTCAGGGGGACTCCAAACTTGTT
TGTATGCAGATCCAGGGCCTATGGAAGGTTAAAAATCAAAACATCTCCACATTGTATGAG
CAGGCAAAACAACTGAAAGATAGATTTCTTTCTTTCCGGATCATTCATGTCCTTCGGGAG
TCAAACTCCGATGCAGATGCTCAGGCGAACATTGCTGTTGAACTTGCTAATGGTCAAATC
CAGGAGGAGATTGAGAAATGA