Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400004790
CDS Infomation

pacid=37455940 polypeptide=PGSC0003DMP400003395 locus=PGSC0003DMG401001903 ID=PGSC0003DMT400004790.v4.03 annot-version=v4.03
Sequence

ATGTATTTTCTTTCTGAACTCTTAGCACTATCAATTGCTTGGTTGTTAGCCCTTTTTGTT
GCTTGCAAATACAAAACTAGAAACAGAGAAACTGTTGCACCTAAAGCTCCAGGTGCGTTG
CCCTTTATAGGTCACCTCTATCTTCTTAGTGGCGATCTTCCTGTTTGTCGAATCCTTGGA
CTCATGACAGATAAATATGGACCCATTTTTCAACTGCAGCTGGGATCCCATCCAGCTCTT
GTTGTCAGCAGTTGGGAAATGGTTAAAGATTGCTTCACAGCTGGCAATGATAAAATATTT
GCTAGTCGACCAAGCATGGCATTAAGCAAGTACTTAGGCTACAATGGAGCAATTTTTGCT
TTAGCCCCTTACGGACAATACTGGCGTGATATTCGTAAAATGGTAACTGTTGAACTCTTA
ACCAACAGTCGTCTTGAGAAGCTAAAGCACGTCCGTACATCAGAAGTGAATTGCTCTATA
AAAGACTTGTACTCAAATTGTAGTAGTAATAATAATAGTGAAGTGAACTTAAGTAGTTGG
TTTGAGAACATAACGTTCAATATAATCATCAGAATGCTTGTTGGGAAGCGATTTACCGGA
TGTTTTGAGGCGGAGATGAATTTCAAGGAGTCAATAAAGAAAGTGTTGTACCTCGGTGGG
ACTTTTGTTTTTTCTGATGCAATTCCGTCGATTGAATGGATGGATATTGGTGGACACATT
AAATCAATGAAACAGACTTATAAAGAAGTTGATAGTGTGTTGGATAGCTGGTTAAAACAA
CATATAGAGAAAAGAAAAGATTGTGATTCAAATTCTAGTGGATCAGACCAATCTGATTTT
TTTGATGTGATGCTTTCTACTCTTCCTGAGGAAACAATGGAGTCTGGATACGACCGTAAT
GCCATTATCAAGGCAACAGCTTTGATACTTATCATGACAGCATCAGAGAGCACTGCAGAG
ACATTAATATGGGCACTATCTATGCTAATAAATGGCACCCGCTCATTGAAATTAGCCCAG
GATGAGCTAGAAGAGCATGTAGGAAGAAATAGATGGGTTGAAGAATCCGACATTAAAAAC
CTTCCTTATTTGCAAGCCATAGTAAAAGAAACCTTACGTCTCTACCCACCCGGTCCTTTG
GCAGGGCCTCGAGAGGCCATCGAAGACTGTTACGTTGGTAATTATCATATTAAAAAGGGA
ACTCGTTTGATTGTTAACTTGTGGAAGCTTCAACGAGATTCGAGAATTTGGGAAGATCCA
AATGAGTTTAAACCAGAGAGGTGGTTCTTGAAGGAACATTCAGAGTTTAATTTTAGAGGA
CAAAATTTTGAATATATTCCGTTTAGCTCTGGAAGAAGAATGTGCCCTGGTTTGACGTTT
GGAAGTCAAGTAGTGCATTTGACGCTAGCAAAATTACTTCATGGATTCAATATATCAACG
ACAAGAGAGGAACCAATAGATTTAAGTGAGGGCTTAGGCATTGCCTTACCTAAAGTGAAG
CCTCTTCAACCATTTGTTTCTCCAAGACTGGCTGTGGAACTCTACCAAAATCTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400003395
PEP Infomation

pacid=37455940 transcript=PGSC0003DMT400004790 locus=PGSC0003DMG401001903 ID=PGSC0003DMT400004790.v4.03 annot-version=v4.03
Sequence

MYFLSELLALSIAWLLALFVACKYKTRNRETVAPKAPGALPFIGHLYLLSGDLPVCRILG
LMTDKYGPIFQLQLGSHPALVVSSWEMVKDCFTAGNDKIFASRPSMALSKYLGYNGAIFA
LAPYGQYWRDIRKMVTVELLTNSRLEKLKHVRTSEVNCSIKDLYSNCSSNNNSEVNLSSW
FENITFNIIIRMLVGKRFTGCFEAEMNFKESIKKVLYLGGTFVFSDAIPSIEWMDIGGHI
KSMKQTYKEVDSVLDSWLKQHIEKRKDCDSNSSGSDQSDFFDVMLSTLPEETMESGYDRN
AIIKATALILIMTASESTAETLIWALSMLINGTRSLKLAQDELEEHVGRNRWVEESDIKN
LPYLQAIVKETLRLYPPGPLAGPREAIEDCYVGNYHIKKGTRLIVNLWKLQRDSRIWEDP
NEFKPERWFLKEHSEFNFRGQNFEYIPFSSGRRMCPGLTFGSQVVHLTLAKLLHGFNIST
TREEPIDLSEGLGIALPKVKPLQPFVSPRLAVELYQNL*

Transcript Sequence

Transcript ID

PGSC0003DMT400004790
Transcript Infomation

pacid=37455940 locus=PGSC0003DMG401001903 ID=PGSC0003DMT400004790.v4.03 annot-version=v4.03
Sequence

ATGTATTTTCTTTCTGAACTCTTAGCACTATCAATTGCTTGGTTGTTAGCCCTTTTTGTT
GCTTGCAAATACAAAACTAGAAACAGAGAAACTGTTGCACCTAAAGCTCCAGGTGCGTTG
CCCTTTATAGGTCACCTCTATCTTCTTAGTGGCGATCTTCCTGTTTGTCGAATCCTTGGA
CTCATGACAGATAAATATGGACCCATTTTTCAACTGCAGCTGGGATCCCATCCAGCTCTT
GTTGTCAGCAGTTGGGAAATGGTTAAAGATTGCTTCACAGCTGGCAATGATAAAATATTT
GCTAGTCGACCAAGCATGGCATTAAGCAAGTACTTAGGCTACAATGGAGCAATTTTTGCT
TTAGCCCCTTACGGACAATACTGGCGTGATATTCGTAAAATGGTAACTGTTGAACTCTTA
ACCAACAGTCGTCTTGAGAAGCTAAAGCACGTCCGTACATCAGAAGTGAATTGCTCTATA
AAAGACTTGTACTCAAATTGTAGTAGTAATAATAATAGTGAAGTGAACTTAAGTAGTTGG
TTTGAGAACATAACGTTCAATATAATCATCAGAATGCTTGTTGGGAAGCGATTTACCGGA
TGTTTTGAGGCGGAGATGAATTTCAAGGAGTCAATAAAGAAAGTGTTGTACCTCGGTGGG
ACTTTTGTTTTTTCTGATGCAATTCCGTCGATTGAATGGATGGATATTGGTGGACACATT
AAATCAATGAAACAGACTTATAAAGAAGTTGATAGTGTGTTGGATAGCTGGTTAAAACAA
CATATAGAGAAAAGAAAAGATTGTGATTCAAATTCTAGTGGATCAGACCAATCTGATTTT
TTTGATGTGATGCTTTCTACTCTTCCTGAGGAAACAATGGAGTCTGGATACGACCGTAAT
GCCATTATCAAGGCAACAGCTTTGATACTTATCATGACAGCATCAGAGAGCACTGCAGAG
ACATTAATATGGGCACTATCTATGCTAATAAATGGCACCCGCTCATTGAAATTAGCCCAG
GATGAGCTAGAAGAGCATGTAGGAAGAAATAGATGGGTTGAAGAATCCGACATTAAAAAC
CTTCCTTATTTGCAAGCCATAGTAAAAGAAACCTTACGTCTCTACCCACCCGGTCCTTTG
GCAGGGCCTCGAGAGGCCATCGAAGACTGTTACGTTGGTAATTATCATATTAAAAAGGGA
ACTCGTTTGATTGTTAACTTGTGGAAGCTTCAACGAGATTCGAGAATTTGGGAAGATCCA
AATGAGTTTAAACCAGAGAGGTGGTTCTTGAAGGAACATTCAGAGTTTAATTTTAGAGGA
CAAAATTTTGAATATATTCCGTTTAGCTCTGGAAGAAGAATGTGCCCTGGTTTGACGTTT
GGAAGTCAAGTAGTGCATTTGACGCTAGCAAAATTACTTCATGGATTCAATATATCAACG
ACAAGAGAGGAACCAATAGATTTAAGTGAGGGCTTAGGCATTGCCTTACCTAAAGTGAAG
CCTCTTCAACCATTTGTTTCTCCAAGACTGGCTGTGGAACTCTACCAAAATCTTTGA