Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400004686
CDS Infomation

pacid=37468923 polypeptide=PGSC0003DMP400003321 locus=PGSC0003DMG400001855 ID=PGSC0003DMT400004686.v4.03 annot-version=v4.03
Sequence

ATGACTTTAACACTTCAATCATCAGCTTCTTTTATCAATTTCAAAGAAACCAAAGGTGTT
AAAACACCTGATGAGTTCTTAGGAATGGTTTATTTTGCACAAGCCAAGCCATCATGCCGG
CTAGTCGCGAAAAGTTCAATGCAAGAAGCTCAACTCTCCCATGAGAGAATCATGGAAGTG
TTGGAAATTGAGAAAAGAGAGAAGCTACATGAGTTAACAGCTAATCACAGCAATAGTAGT
ACAAGGGTACCTGTTTTTGTGATGCTTCCACTTGACACCATGACTATGGGAGGGAACTTG
AACAGGCCACGAGCGATGAATGCGAGCTTGATGGCGTTGAAAAGTTCTGGAGCTGAAGGG
GTGATGGTGGATGCTTGGTGGGGATTGGTGGAGAAAGATGGACCTTTGAAGTATAATTGG
GAAGGATATGCTGAACTTGTAAAGATGTGTCAAGAACATGGATTGAAGCTTCAAGTTGTC
ATGTCTTTTCATCAATGTGGAGGAAATGTTGGAGATTCTTGCAGTATTCCTCTACCTCCA
TGGGTACTTGAAGAAATCAGCAAGAATCCTGACCTTGTCTACACAGATAGATCAGGCCGG
AGAAATCCTGAGTATCTATCCTTAGGTTGTGATATGTTACCAGTACTCAAAGGAAGAACA
CCTATTCAAGTATACACCGACTATATGAGGAGCTTCAGAGAAAGATTCAACGATTACTTG
GGAAACGTCATAGTGGAAATCCAAGTGGGAATGGGCCCTTGTGGAGAGCTAAGATATCCA
GCCTATCCCGAAAGCAATGGTACATGGAGGTTTCCTGGAATTGGAGAATTCCAATGCTAT
GACAAGTACATGGGAGCTTCATTGGCAGCAGTGGCCAAGGCAGCTGGAAAGGATGACTGG
GGCCAGGGAGGGCCTCATGATTCTGGGAAGTACAACCAGTTTCCTGAGGATACTGGATTT
TTCCAGAGGGATGGAACATGGAACAGTGAATATGGACAGTTCTTCCTAGAGTGGTATTCA
GGAAAGCTACTGGAGCATGGTGACAGAATAGTAGCAGCAGGAGAAAGTATATACCAAGGA
ACTGGGGCTAAACTATCTGGAAAGGTAGCTGGGATTCATTGGCATTACAATACTAGATCA
CATGCTGCAGAGTTAACTTCAGGATATTATAATACAAGACACAGAGATGGTTATCTACCT
ATAGCACGTATGTTAGCGAAACATGGTGCTGTACTTAACTTTACATGTATGGAAATGAGG
GATGGTGAACAGCCCCAGAGTGCAAACTGTTCACCAGAAGGCTTAGTTCAACAAGTTAAA
ACTGCAGCTAGAACTGCTAAAGTAGAACTTGCTGGAGAAAATGCTCTAGAAAGGTATGAT
GGAGGAGCATTTTCTCAAGTTTTGGCAACAAGCATGTCAAATTCTGGAAATGGATTGAGT
GCATTTACATTCTTGCGAATGAACAAACGGTTGTTTGAGCCAGAAAATTGGCGGAATCTA
GTGCAATTTGTGAAGAGCATGTCTGAAGGAGGTCGAAATGCTAGCCTTCCAGAGTGTGAC
TCAAGCAGGACAGACCTCTATGTAAGATTTATCAAAGAGAGTCATTCTAAGAAAGCTACA
GAGGTTGCAGTAGTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400003321
PEP Infomation

pacid=37468923 transcript=PGSC0003DMT400004686 locus=PGSC0003DMG400001855 ID=PGSC0003DMT400004686.v4.03 annot-version=v4.03
Sequence

MTLTLQSSASFINFKETKGVKTPDEFLGMVYFAQAKPSCRLVAKSSMQEAQLSHERIMEV
LEIEKREKLHELTANHSNSSTRVPVFVMLPLDTMTMGGNLNRPRAMNASLMALKSSGAEG
VMVDAWWGLVEKDGPLKYNWEGYAELVKMCQEHGLKLQVVMSFHQCGGNVGDSCSIPLPP
WVLEEISKNPDLVYTDRSGRRNPEYLSLGCDMLPVLKGRTPIQVYTDYMRSFRERFNDYL
GNVIVEIQVGMGPCGELRYPAYPESNGTWRFPGIGEFQCYDKYMGASLAAVAKAAGKDDW
GQGGPHDSGKYNQFPEDTGFFQRDGTWNSEYGQFFLEWYSGKLLEHGDRIVAAGESIYQG
TGAKLSGKVAGIHWHYNTRSHAAELTSGYYNTRHRDGYLPIARMLAKHGAVLNFTCMEMR
DGEQPQSANCSPEGLVQQVKTAARTAKVELAGENALERYDGGAFSQVLATSMSNSGNGLS
AFTFLRMNKRLFEPENWRNLVQFVKSMSEGGRNASLPECDSSRTDLYVRFIKESHSKKAT
EVAVV*

Transcript Sequence

Transcript ID

PGSC0003DMT400004686
Transcript Infomation

pacid=37468923 locus=PGSC0003DMG400001855 ID=PGSC0003DMT400004686.v4.03 annot-version=v4.03
Sequence

ATGACTTTAACACTTCAATCATCAGCTTCTTTTATCAATTTCAAAGAAACCAAAGGTGTT
AAAACACCTGATGAGTTCTTAGGAATGGTTTATTTTGCACAAGCCAAGCCATCATGCCGG
CTAGTCGCGAAAAGTTCAATGCAAGAAGCTCAACTCTCCCATGAGAGAATCATGGAAGTG
TTGGAAATTGAGAAAAGAGAGAAGCTACATGAGTTAACAGCTAATCACAGCAATAGTAGT
ACAAGGGTACCTGTTTTTGTGATGCTTCCACTTGACACCATGACTATGGGAGGGAACTTG
AACAGGCCACGAGCGATGAATGCGAGCTTGATGGCGTTGAAAAGTTCTGGAGCTGAAGGG
GTGATGGTGGATGCTTGGTGGGGATTGGTGGAGAAAGATGGACCTTTGAAGTATAATTGG
GAAGGATATGCTGAACTTGTAAAGATGTGTCAAGAACATGGATTGAAGCTTCAAGTTGTC
ATGTCTTTTCATCAATGTGGAGGAAATGTTGGAGATTCTTGCAGTATTCCTCTACCTCCA
TGGGTACTTGAAGAAATCAGCAAGAATCCTGACCTTGTCTACACAGATAGATCAGGCCGG
AGAAATCCTGAGTATCTATCCTTAGGTTGTGATATGTTACCAGTACTCAAAGGAAGAACA
CCTATTCAAGTATACACCGACTATATGAGGAGCTTCAGAGAAAGATTCAACGATTACTTG
GGAAACGTCATAGTGGAAATCCAAGTGGGAATGGGCCCTTGTGGAGAGCTAAGATATCCA
GCCTATCCCGAAAGCAATGGTACATGGAGGTTTCCTGGAATTGGAGAATTCCAATGCTAT
GACAAGTACATGGGAGCTTCATTGGCAGCAGTGGCCAAGGCAGCTGGAAAGGATGACTGG
GGCCAGGGAGGGCCTCATGATTCTGGGAAGTACAACCAGTTTCCTGAGGATACTGGATTT
TTCCAGAGGGATGGAACATGGAACAGTGAATATGGACAGTTCTTCCTAGAGTGGTATTCA
GGAAAGCTACTGGAGCATGGTGACAGAATAGTAGCAGCAGGAGAAAGTATATACCAAGGA
ACTGGGGCTAAACTATCTGGAAAGGTAGCTGGGATTCATTGGCATTACAATACTAGATCA
CATGCTGCAGAGTTAACTTCAGGATATTATAATACAAGACACAGAGATGGTTATCTACCT
ATAGCACGTATGTTAGCGAAACATGGTGCTGTACTTAACTTTACATGTATGGAAATGAGG
GATGGTGAACAGCCCCAGAGTGCAAACTGTTCACCAGAAGGCTTAGTTCAACAAGTTAAA
ACTGCAGCTAGAACTGCTAAAGTAGAACTTGCTGGAGAAAATGCTCTAGAAAGGTATGAT
GGAGGAGCATTTTCTCAAGTTTTGGCAACAAGCATGTCAAATTCTGGAAATGGATTGAGT
GCATTTACATTCTTGCGAATGAACAAACGGTTGTTTGAGCCAGAAAATTGGCGGAATCTA
GTGCAATTTGTGAAGAGCATGTCTGAAGGAGGTCGAAATGCTAGCCTTCCAGAGTGTGAC
TCAAGCAGGACAGACCTCTATGTAAGATTTATCAAAGAGAGTCATTCTAAGAAAGCTACA
GAGGTTGCAGTAGTGTAA