Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400004642
CDS Infomation

pacid=37471307 polypeptide=PGSC0003DMP400003297 locus=PGSC0003DMG400001841 ID=PGSC0003DMT400004642.v4.03 annot-version=v4.03
Sequence

ATGGCTGTTCAAGCACAATACCCATCAAATGTTCTCTTTCTAAACAGAAATGTACAAGAA
GGAAAACCCCCACTTGGTAATGATTATTCATTGCAATCTCAACCTGGTGGTGGTGGCGGA
GGAGGATCTTTTCTTGATCAAACACAAATGTTATTCAATCCAGGAGCTGGGGTAAATTCA
AGGAAGAGAGGAAGAGAACTTACAAGTACAACGGCAGCAATGAATCCATTGATGTCAATG
CAATCTCAGCCTCAACCGCAACTCATCGACCTCACTCAACTTCACACATCGCCTCCTTCG
CAGCAACAGCCACCCAACCTTGTCTCCACCGGACTCCGTTTAGCTTTCGGAGACCAACAT
CAACACCAACACCAACAACAACATCAATTACAACAACAACAACAACAACATCATCACCAT
CACTCTCTTTCTCCTCAATCATCAGCTTTCTATTCAATATTAACAGAAGACTTAGCTACT
CATATCAAACAACAACGCGATGAAATTGATCATCTCCTCCTAATTCAGGGAGAGCAATTG
AGGCGTACATTAGCAGAGAAAAGGCAAAGTCACTACCGTGCACTGATCGGAGCAGCAGAG
GAATCAATGGCACGAAGGCTAAGAGAAAAAGAAGCAGAGATGGAGAAAGCAGCTCGGCGA
AACGCTGAACTAGAGGCGCGTGCAGCGCAATTTAGCGCAGAGGCACAGGCTTGGCAAGCT
AGAGCAAGAGCACAGGAAGTAACGGCAGCAACACTTCAAGCTCAGCTGCAACACGCGATG
ATCAACGGCGGAGGTTGTAATGAGATAAACGACGGTAACGGCGGCGAACCGGAGGATGCT
GAATCAGCGTACATTGACCCGGACCGAGTTGTTGAGTCTACCGGCGGTCCGAGTTGCAAA
GCGTGTAGAAAACGAGTCGCCTCAGTAGTAGTACTGCCGTGTCGCCATTTGTGTATCTGT
ACAGAATGTGATGCTGTTGCTCAAGCTTGCCCGTTGTGTTTCGCCATTAGAAGCTCAAGT
GTTGAGGTCTTTCTCTGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400003297
PEP Infomation

pacid=37471307 transcript=PGSC0003DMT400004642 locus=PGSC0003DMG400001841 ID=PGSC0003DMT400004642.v4.03 annot-version=v4.03
Sequence

MAVQAQYPSNVLFLNRNVQEGKPPLGNDYSLQSQPGGGGGGGSFLDQTQMLFNPGAGVNS
RKRGRELTSTTAAMNPLMSMQSQPQPQLIDLTQLHTSPPSQQQPPNLVSTGLRLAFGDQH
QHQHQQQHQLQQQQQQHHHHHSLSPQSSAFYSILTEDLATHIKQQRDEIDHLLLIQGEQL
RRTLAEKRQSHYRALIGAAEESMARRLREKEAEMEKAARRNAELEARAAQFSAEAQAWQA
RARAQEVTAATLQAQLQHAMINGGGCNEINDGNGGEPEDAESAYIDPDRVVESTGGPSCK
ACRKRVASVVVLPCRHLCICTECDAVAQACPLCFAIRSSSVEVFLC*

Transcript Sequence

Transcript ID

PGSC0003DMT400004642
Transcript Infomation

pacid=37471307 locus=PGSC0003DMG400001841 ID=PGSC0003DMT400004642.v4.03 annot-version=v4.03
Sequence

ATGGCTGTTCAAGCACAATACCCATCAAATGTTCTCTTTCTAAACAGAAATGTACAAGAA
GGAAAACCCCCACTTGGTAATGATTATTCATTGCAATCTCAACCTGGTGGTGGTGGCGGA
GGAGGATCTTTTCTTGATCAAACACAAATGTTATTCAATCCAGGAGCTGGGGTAAATTCA
AGGAAGAGAGGAAGAGAACTTACAAGTACAACGGCAGCAATGAATCCATTGATGTCAATG
CAATCTCAGCCTCAACCGCAACTCATCGACCTCACTCAACTTCACACATCGCCTCCTTCG
CAGCAACAGCCACCCAACCTTGTCTCCACCGGACTCCGTTTAGCTTTCGGAGACCAACAT
CAACACCAACACCAACAACAACATCAATTACAACAACAACAACAACAACATCATCACCAT
CACTCTCTTTCTCCTCAATCATCAGCTTTCTATTCAATATTAACAGAAGACTTAGCTACT
CATATCAAACAACAACGCGATGAAATTGATCATCTCCTCCTAATTCAGGGAGAGCAATTG
AGGCGTACATTAGCAGAGAAAAGGCAAAGTCACTACCGTGCACTGATCGGAGCAGCAGAG
GAATCAATGGCACGAAGGCTAAGAGAAAAAGAAGCAGAGATGGAGAAAGCAGCTCGGCGA
AACGCTGAACTAGAGGCGCGTGCAGCGCAATTTAGCGCAGAGGCACAGGCTTGGCAAGCT
AGAGCAAGAGCACAGGAAGTAACGGCAGCAACACTTCAAGCTCAGCTGCAACACGCGATG
ATCAACGGCGGAGGTTGTAATGAGATAAACGACGGTAACGGCGGCGAACCGGAGGATGCT
GAATCAGCGTACATTGACCCGGACCGAGTTGTTGAGTCTACCGGCGGTCCGAGTTGCAAA
GCGTGTAGAAAACGAGTCGCCTCAGTAGTAGTACTGCCGTGTCGCCATTTGTGTATCTGT
ACAGAATGTGATGCTGTTGCTCAAGCTTGCCCGTTGTGTTTCGCCATTAGAAGCTCAAGT
GTTGAGGTCTTTCTCTGTTAG