Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400004628
CDS Infomation

pacid=37471167 polypeptide=PGSC0003DMP400003288 locus=PGSC0003DMG400001834 ID=PGSC0003DMT400004628.v4.03 annot-version=v4.03
Sequence

ATGGCATACAAGAAAATGACAAATAGGTCTATTATTTCAGAGATGGACCAGAATGTCAAA
AGGATGTTGAAACTCATTGAAGAGGATGCAGATTCATTTGCTAAAAGGGCAGAAATGTAT
TATCAGAAAAGGCCAGAATTGATCACACTTGTTGAGGAATTCTACCGCATGTACCGGTCA
TTAGCCGAGCGTTATGATCATGTGACGGGGGAGCTCCGGAAAAATATTCCTTCAGATCTT
CAATCACAGGGGTCAGGCATCTCTGATGTGGGTTCTGAACCACCCTCCAGGTTGCCCTCT
CCTGATCGGAGGCCAAGCCGTCCTAAACTTGGTCCTCGTGCTGCTGGATTTGAATTTTTT
CTTGGCGCAGGCGGAAGTAGCTCGGACCTGGCGAAGGAAGGAGATGAATCCTCAACATTA
GATTCTGAATCTGAATCAGATGATTCGTCTATCAATAATTACTCAAGTACAATAAGCAAT
GATGATGACCATGGGTTGCGTAAGAAGATTGGTGAATTGGAGGTCGAGCTCCGTGACGTG
AAAGAGAAGCTTCGCAAGCAACATGAAGAGGTCTCTGAGAGCTCTGTTAAGGGATCACAT
ATGGGCAATGATAATCTTATCGCAAGGATAGCTGGGTATGAGGAAGACCTTAGAAATGCA
AAAGAAAAGATCCGGTTATCAGAAGAAGAGATTAGCAGGTTGAAAATTGAGCTTCAGAAG
TATGTATCAGGGGACTACGTGAAGAACATCAATGAGATTACTGCTGGACAGCAAGCTAAA
ATTTCTGATGAGGATCTGCAAGAGAATGCTACAGAGGAAGAACCACAAGTTTTGGACCCA
GAATCTAAGATCCGAACACTTGAGGAAGAGTTAAGGAGAACGATAGAGAAGCTTCATGAT
TCAGAGAAAGAGGTGGAGCGCTTAAGAGAGGAACTTAAAAGTAACGGTTCCTCCGTAAAA
TTACTTCATGATCAGCTTGGATCAGCACAGAAAGATGTTTCTGGCTGGAAAGCCAAACTT
GAGAGAGAGAAAAGAGAGGTCTCAAAGCTGCAGGACCGAATTGCAAGGTACAAATCCAAT
TTGTCAGACCGTGATCAAGAAATCAGAGGACTGAAAGAATCAATATCAAATGCCAACAAG
GCTTTGGCAGAAGAAAACTTGGAACTTCAATGTGAAATTACCAAATTATTGAAGGAACGA
GCATATTTGGAGGATAATATCAAAGAAATGGATCTACGTTGCCAATCATTAGAGGAGGAT
GTTAGACGAGCTGTAGCAGGGAAAGAAGAAATGGAAATGCTGCTAAAATCTGAAATCGAG
CAGTTAAAGTTGACCATCGCTGAGAGGGACAACCATATTGAAGAACTGAACAGAAACCTT
GATGCATTATACCAGAAATATGATGCATTGGAAACAGAGAAAGATGACCTAAATGCTAGA
GTTGCCTTGCTAGATGAAGATCTAAGTTCTAAAGATGATCAGATTGATCAAATGAACAAC
CATTTGAACCAACTGCACATTGAGCACGTCAAGTTGATTTCCGAAACTGAAGGGGCTCGT
AAATTGGTAGAGGAGCTGAGGTCTAGAGTTAAAGAAGTGGAAAGAGAAGTAGAGAGACAA
AAGGAAATAGTTTTGGAAGGAGCAGAAGAGAAACGCGAAGCAATTAGACAGCTTTGCTTC
TCACTTGAGCACTATAGAAATGGTTACCAAAGGCTTCGACAGGCTTTGGAGCATAAGAGA
CTACCTGTAATGGCGGCCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400003288
PEP Infomation

pacid=37471167 transcript=PGSC0003DMT400004628 locus=PGSC0003DMG400001834 ID=PGSC0003DMT400004628.v4.03 annot-version=v4.03
Sequence

MAYKKMTNRSIISEMDQNVKRMLKLIEEDADSFAKRAEMYYQKRPELITLVEEFYRMYRS
LAERYDHVTGELRKNIPSDLQSQGSGISDVGSEPPSRLPSPDRRPSRPKLGPRAAGFEFF
LGAGGSSSDLAKEGDESSTLDSESESDDSSINNYSSTISNDDDHGLRKKIGELEVELRDV
KEKLRKQHEEVSESSVKGSHMGNDNLIARIAGYEEDLRNAKEKIRLSEEEISRLKIELQK
YVSGDYVKNINEITAGQQAKISDEDLQENATEEEPQVLDPESKIRTLEEELRRTIEKLHD
SEKEVERLREELKSNGSSVKLLHDQLGSAQKDVSGWKAKLEREKREVSKLQDRIARYKSN
LSDRDQEIRGLKESISNANKALAEENLELQCEITKLLKERAYLEDNIKEMDLRCQSLEED
VRRAVAGKEEMEMLLKSEIEQLKLTIAERDNHIEELNRNLDALYQKYDALETEKDDLNAR
VALLDEDLSSKDDQIDQMNNHLNQLHIEHVKLISETEGARKLVEELRSRVKEVEREVERQ
KEIVLEGAEEKREAIRQLCFSLEHYRNGYQRLRQALEHKRLPVMAA*

Transcript Sequence

Transcript ID

PGSC0003DMT400004628
Transcript Infomation

pacid=37471167 locus=PGSC0003DMG400001834 ID=PGSC0003DMT400004628.v4.03 annot-version=v4.03
Sequence

ATGGCATACAAGAAAATGACAAATAGGTCTATTATTTCAGAGATGGACCAGAATGTCAAA
AGGATGTTGAAACTCATTGAAGAGGATGCAGATTCATTTGCTAAAAGGGCAGAAATGTAT
TATCAGAAAAGGCCAGAATTGATCACACTTGTTGAGGAATTCTACCGCATGTACCGGTCA
TTAGCCGAGCGTTATGATCATGTGACGGGGGAGCTCCGGAAAAATATTCCTTCAGATCTT
CAATCACAGGGGTCAGGCATCTCTGATGTGGGTTCTGAACCACCCTCCAGGTTGCCCTCT
CCTGATCGGAGGCCAAGCCGTCCTAAACTTGGTCCTCGTGCTGCTGGATTTGAATTTTTT
CTTGGCGCAGGCGGAAGTAGCTCGGACCTGGCGAAGGAAGGAGATGAATCCTCAACATTA
GATTCTGAATCTGAATCAGATGATTCGTCTATCAATAATTACTCAAGTACAATAAGCAAT
GATGATGACCATGGGTTGCGTAAGAAGATTGGTGAATTGGAGGTCGAGCTCCGTGACGTG
AAAGAGAAGCTTCGCAAGCAACATGAAGAGGTCTCTGAGAGCTCTGTTAAGGGATCACAT
ATGGGCAATGATAATCTTATCGCAAGGATAGCTGGGTATGAGGAAGACCTTAGAAATGCA
AAAGAAAAGATCCGGTTATCAGAAGAAGAGATTAGCAGGTTGAAAATTGAGCTTCAGAAG
TATGTATCAGGGGACTACGTGAAGAACATCAATGAGATTACTGCTGGACAGCAAGCTAAA
ATTTCTGATGAGGATCTGCAAGAGAATGCTACAGAGGAAGAACCACAAGTTTTGGACCCA
GAATCTAAGATCCGAACACTTGAGGAAGAGTTAAGGAGAACGATAGAGAAGCTTCATGAT
TCAGAGAAAGAGGTGGAGCGCTTAAGAGAGGAACTTAAAAGTAACGGTTCCTCCGTAAAA
TTACTTCATGATCAGCTTGGATCAGCACAGAAAGATGTTTCTGGCTGGAAAGCCAAACTT
GAGAGAGAGAAAAGAGAGGTCTCAAAGCTGCAGGACCGAATTGCAAGGTACAAATCCAAT
TTGTCAGACCGTGATCAAGAAATCAGAGGACTGAAAGAATCAATATCAAATGCCAACAAG
GCTTTGGCAGAAGAAAACTTGGAACTTCAATGTGAAATTACCAAATTATTGAAGGAACGA
GCATATTTGGAGGATAATATCAAAGAAATGGATCTACGTTGCCAATCATTAGAGGAGGAT
GTTAGACGAGCTGTAGCAGGGAAAGAAGAAATGGAAATGCTGCTAAAATCTGAAATCGAG
CAGTTAAAGTTGACCATCGCTGAGAGGGACAACCATATTGAAGAACTGAACAGAAACCTT
GATGCATTATACCAGAAATATGATGCATTGGAAACAGAGAAAGATGACCTAAATGCTAGA
GTTGCCTTGCTAGATGAAGATCTAAGTTCTAAAGATGATCAGATTGATCAAATGAACAAC
CATTTGAACCAACTGCACATTGAGCACGTCAAGTTGATTTCCGAAACTGAAGGGGCTCGT
AAATTGGTAGAGGAGCTGAGGTCTAGAGTTAAAGAAGTGGAAAGAGAAGTAGAGAGACAA
AAGGAAATAGTTTTGGAAGGAGCAGAAGAGAAACGCGAAGCAATTAGACAGCTTTGCTTC
TCACTTGAGCACTATAGAAATGGTTACCAAAGGCTTCGACAGGCTTTGGAGCATAAGAGA
CTACCTGTAATGGCGGCCTAA