Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400004553
CDS Infomation

pacid=37441755 polypeptide=PGSC0003DMP400003240 locus=PGSC0003DMG400001809 ID=PGSC0003DMT400004553.v4.03 annot-version=v4.03
Sequence

ATGGATTTCATCAGAATGAAAATAAGTCTTTCTGTCTTATTGTTTTTCCATGTTTGGCTT
TGTAGAGCCTTTAATGATGTCTCAACAATTCCTTTTAACAAAGGATTCAGCCATCTCTTT
GGTGATGGAAACATTCTTCATGCTAACGATGATAATAGCCTTCAACTTCATCTCAACCAA
AACACAGGTTCAGGTTTCAAGTCTTCTGACCTTTACAACCATGGTTTCTTCAGTGCTAAA
ATTAAATTGCCATCAGATTATACTGCAGGAATCGTTGTTGCCTTCTATACGACGAATCAA
GATGTATTTAAGAAGACACACGATGAACTAGATTTTGAGTTTCTTGGAAATATAAGAGGA
AAAGCATGGAGATTTCAAACAAATATGTATGGAAATGGAAGCACACATAGAGGAAGAGAA
GAAAGATATACTCTATGGTTTGATCCTTCAAAAGAGTTCCATCGTTATAGTATTTTGTGG
ACCAACAAAAACATCATCTTTTATATAGATGATGTTCCAATTAGAGAAATAGTAAGAAAT
GATGCAATGGGTGGAGACTACCCATCAAAGCCAATGGGCCTATATGCAACAATTTGGGAT
GCTTCAGATTGGGCTACTTCAGGTGGAAAATACAAAACAAATTACAAATATGCACCATTT
ATAGCTGAATTTACTGATTTAGTACTCAATGGATGTGCAATGGACCCATTGGAACAAGTT
GTAAACCCTAGTCTTTGTGATGAAAAAGATGTTGAACTCCAAAAGGCGGATTTTTCAAGG
ATTACATCGAGACAAAGAATGGCCATGAAAAGATTCAGGGCGAAATATATGTACTATTCT
TACTGTTACGATTCGTTGAGGTACTCAGTGCCACCACCAGAGTGCGAAATAGATCCAGTT
GAGCAACAAAGTTTTAAAGAGACTGGAAGGTTGAAGTTTATAAACAAGCACCACGGACAT
CGTCATCCTAAGAAATCAAGAAGTGAAGTTCTTGATGCTAGGAATTATGGAAATGAAGAT
GAAGAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400003240
PEP Infomation

pacid=37441755 transcript=PGSC0003DMT400004553 locus=PGSC0003DMG400001809 ID=PGSC0003DMT400004553.v4.03 annot-version=v4.03
Sequence

MDFIRMKISLSVLLFFHVWLCRAFNDVSTIPFNKGFSHLFGDGNILHANDDNSLQLHLNQ
NTGSGFKSSDLYNHGFFSAKIKLPSDYTAGIVVAFYTTNQDVFKKTHDELDFEFLGNIRG
KAWRFQTNMYGNGSTHRGREERYTLWFDPSKEFHRYSILWTNKNIIFYIDDVPIREIVRN
DAMGGDYPSKPMGLYATIWDASDWATSGGKYKTNYKYAPFIAEFTDLVLNGCAMDPLEQV
VNPSLCDEKDVELQKADFSRITSRQRMAMKRFRAKYMYYSYCYDSLRYSVPPPECEIDPV
EQQSFKETGRLKFINKHHGHRHPKKSRSEVLDARNYGNEDEE*

Transcript Sequence

Transcript ID

PGSC0003DMT400004553
Transcript Infomation

pacid=37441755 locus=PGSC0003DMG400001809 ID=PGSC0003DMT400004553.v4.03 annot-version=v4.03
Sequence

ATGGATTTCATCAGAATGAAAATAAGTCTTTCTGTCTTATTGTTTTTCCATGTTTGGCTT
TGTAGAGCCTTTAATGATGTCTCAACAATTCCTTTTAACAAAGGATTCAGCCATCTCTTT
GGTGATGGAAACATTCTTCATGCTAACGATGATAATAGCCTTCAACTTCATCTCAACCAA
AACACAGGTTCAGGTTTCAAGTCTTCTGACCTTTACAACCATGGTTTCTTCAGTGCTAAA
ATTAAATTGCCATCAGATTATACTGCAGGAATCGTTGTTGCCTTCTATACGACGAATCAA
GATGTATTTAAGAAGACACACGATGAACTAGATTTTGAGTTTCTTGGAAATATAAGAGGA
AAAGCATGGAGATTTCAAACAAATATGTATGGAAATGGAAGCACACATAGAGGAAGAGAA
GAAAGATATACTCTATGGTTTGATCCTTCAAAAGAGTTCCATCGTTATAGTATTTTGTGG
ACCAACAAAAACATCATCTTTTATATAGATGATGTTCCAATTAGAGAAATAGTAAGAAAT
GATGCAATGGGTGGAGACTACCCATCAAAGCCAATGGGCCTATATGCAACAATTTGGGAT
GCTTCAGATTGGGCTACTTCAGGTGGAAAATACAAAACAAATTACAAATATGCACCATTT
ATAGCTGAATTTACTGATTTAGTACTCAATGGATGTGCAATGGACCCATTGGAACAAGTT
GTAAACCCTAGTCTTTGTGATGAAAAAGATGTTGAACTCCAAAAGGCGGATTTTTCAAGG
ATTACATCGAGACAAAGAATGGCCATGAAAAGATTCAGGGCGAAATATATGTACTATTCT
TACTGTTACGATTCGTTGAGGTACTCAGTGCCACCACCAGAGTGCGAAATAGATCCAGTT
GAGCAACAAAGTTTTAAAGAGACTGGAAGGTTGAAGTTTATAAACAAGCACCACGGACAT
CGTCATCCTAAGAAATCAAGAAGTGAAGTTCTTGATGCTAGGAATTATGGAAATGAAGAT
GAAGAGTGA