Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400004546
CDS Infomation

pacid=37436858 polypeptide=PGSC0003DMP400003234 locus=PGSC0003DMG400001806 ID=PGSC0003DMT400004546.v4.03 annot-version=v4.03
Sequence

ATGAGCAAAAGCAAAAGCATAGGATCTTCATCCAGGAAACTAATGCATGCTTCATCATCA
GATGTTCAGCTCAACATTTGTGGATTGCCATTCTCTTTGAATAGGGAACTTTTGGCTGCA
AGATCTTCAAAGCTAGCTGCATTACTGAAAGAGAATCCTGAAGATGATCTTTCTCATTTG
CTAGGAGATATTCCTACTGATTCTGAAACTTTTGAGATTGTAGCAAGATTCTGTCATGGC
TTTGACATAAACTTGTCATCTGAGAATGTCATTAAAGTACTTTGTCTCGCTCACTATCTT
GGAATGTCCGAGATTCACAGCACCAATAACCTCACAAAGAAGGCTTGTTTCTACTTTCAA
AACACTGTCCTTCCTAGCTGGAACAAGAGTATTAAAGCCCTCAAATCTGCAGAAAACATT
CTTCAACAAGCCGCGGATCTTGGCTTGATTGATGCATGTGCTGAGTCCATCATCGCCAAG
GTAATGCACGATCCAAGTCTTCTTGGAGAGCCGATGAGGAATGTAACAACAACGGATGAT
GACAGTGAGAACGATGAAAATGCCTACAAGCCAAATGTCAGGCGGAGACTTTTTGTTCTT
GACTGGAAATCAGAGGACTTGACACTACTTTCCATTACTCTCTACGAGCCCATAATTCGT
GCAATGGTTCATCGAAAAGTCCCTCTGGAATACGTGGCATCATCTCTGTTTCACTATCTC
AACAAATGGGTTTTTTCGGACACTAAAGGAGAAGAAGATGATCCGTCAACTTATGAGAAG
AATTCTCAAAGAGTGATCATTGAGGCAGTGGAGAGACTGTTGCCTCAAGAAAGAGGGTTA
ATCCCCATTTCTTTGCTCTCTCAAATGCTGCAATCCGCGATAATCTTGGATGCTCATACT
GAATGCAAAACCGGGTTGGAGATTAGAATAGGAAAACATCTAGACCAGGCAACCGTGAAG
GACCTCTTAATACCTGCACGAGGATATGCAAAAGAAGAGCGGTATGACACTGAAAGTGTG
AAAAGGATATTGAAGAATTTCTACAGCAATTACGCAAGCACAGATAAATCTGGCCTAGTC
GTGGTAGCAGAACTTGTCGATAACTTCTTGGCTGAGGTTTCTAGTGACATAGATTTAAAG
TTGAACACATTCTTATCACTAGCAGAATTATCACAAGCAGCAACAGGAGGAACTAACAGA
AATTCTGATGATATGTATAGAGCAATTGATATATACTTGGACAAGCACAGATTTCTCACT
GATTGGGAAAGGGAGGAGGTTTGCAGGGTGTTAGATTGCAGCAAAATGTCTCCTGAAGCC
TGTGAGCATGCTGCACAGAACGAAAAACTACCAGTTCGAGTGATGGTGCAGATTCTGTTT
TCTGTGCAGCTGAAGTTGAAGGATACTGTGTCCAAGAAGATACAAGGGGGTCCTGATAAC
CGATTGTTGAAGCTGGAAGACGACGAGGAAGATGCAAGGGGGACTAGCAGCAATGAAGAG
GAAATGATGAAAGCAGAGATGGAAAAGATGGGAAGCAAGGTGGTTGAGCTGGAGAAAGAA
TGCGATACGATGAAAAGGGAAATTCAAAGAGGTGGTTCCCAGCACAAGAATCAAAAGGGG
AAAACAAGCATATGGAAAGAAATGAAGAGGAAGCTTGGTTGTATGACAAGCTTGCATGAG
CCAAATTGTCATGTGAAGAAGAAAAAAGTCCATCCTCCAAAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400003234
PEP Infomation

pacid=37436858 transcript=PGSC0003DMT400004546 locus=PGSC0003DMG400001806 ID=PGSC0003DMT400004546.v4.03 annot-version=v4.03
Sequence

MSKSKSIGSSSRKLMHASSSDVQLNICGLPFSLNRELLAARSSKLAALLKENPEDDLSHL
LGDIPTDSETFEIVARFCHGFDINLSSENVIKVLCLAHYLGMSEIHSTNNLTKKACFYFQ
NTVLPSWNKSIKALKSAENILQQAADLGLIDACAESIIAKVMHDPSLLGEPMRNVTTTDD
DSENDENAYKPNVRRRLFVLDWKSEDLTLLSITLYEPIIRAMVHRKVPLEYVASSLFHYL
NKWVFSDTKGEEDDPSTYEKNSQRVIIEAVERLLPQERGLIPISLLSQMLQSAIILDAHT
ECKTGLEIRIGKHLDQATVKDLLIPARGYAKEERYDTESVKRILKNFYSNYASTDKSGLV
VVAELVDNFLAEVSSDIDLKLNTFLSLAELSQAATGGTNRNSDDMYRAIDIYLDKHRFLT
DWEREEVCRVLDCSKMSPEACEHAAQNEKLPVRVMVQILFSVQLKLKDTVSKKIQGGPDN
RLLKLEDDEEDARGTSSNEEEMMKAEMEKMGSKVVELEKECDTMKREIQRGGSQHKNQKG
KTSIWKEMKRKLGCMTSLHEPNCHVKKKKVHPPK*

Transcript Sequence

Transcript ID

PGSC0003DMT400004546
Transcript Infomation

pacid=37436858 locus=PGSC0003DMG400001806 ID=PGSC0003DMT400004546.v4.03 annot-version=v4.03
Sequence

ATGAGCAAAAGCAAAAGCATAGGATCTTCATCCAGGAAACTAATGCATGCTTCATCATCA
GATGTTCAGCTCAACATTTGTGGATTGCCATTCTCTTTGAATAGGGAACTTTTGGCTGCA
AGATCTTCAAAGCTAGCTGCATTACTGAAAGAGAATCCTGAAGATGATCTTTCTCATTTG
CTAGGAGATATTCCTACTGATTCTGAAACTTTTGAGATTGTAGCAAGATTCTGTCATGGC
TTTGACATAAACTTGTCATCTGAGAATGTCATTAAAGTACTTTGTCTCGCTCACTATCTT
GGAATGTCCGAGATTCACAGCACCAATAACCTCACAAAGAAGGCTTGTTTCTACTTTCAA
AACACTGTCCTTCCTAGCTGGAACAAGAGTATTAAAGCCCTCAAATCTGCAGAAAACATT
CTTCAACAAGCCGCGGATCTTGGCTTGATTGATGCATGTGCTGAGTCCATCATCGCCAAG
GTAATGCACGATCCAAGTCTTCTTGGAGAGCCGATGAGGAATGTAACAACAACGGATGAT
GACAGTGAGAACGATGAAAATGCCTACAAGCCAAATGTCAGGCGGAGACTTTTTGTTCTT
GACTGGAAATCAGAGGACTTGACACTACTTTCCATTACTCTCTACGAGCCCATAATTCGT
GCAATGGTTCATCGAAAAGTCCCTCTGGAATACGTGGCATCATCTCTGTTTCACTATCTC
AACAAATGGGTTTTTTCGGACACTAAAGGAGAAGAAGATGATCCGTCAACTTATGAGAAG
AATTCTCAAAGAGTGATCATTGAGGCAGTGGAGAGACTGTTGCCTCAAGAAAGAGGGTTA
ATCCCCATTTCTTTGCTCTCTCAAATGCTGCAATCCGCGATAATCTTGGATGCTCATACT
GAATGCAAAACCGGGTTGGAGATTAGAATAGGAAAACATCTAGACCAGGCAACCGTGAAG
GACCTCTTAATACCTGCACGAGGATATGCAAAAGAAGAGCGGTATGACACTGAAAGTGTG
AAAAGGATATTGAAGAATTTCTACAGCAATTACGCAAGCACAGATAAATCTGGCCTAGTC
GTGGTAGCAGAACTTGTCGATAACTTCTTGGCTGAGGTTTCTAGTGACATAGATTTAAAG
TTGAACACATTCTTATCACTAGCAGAATTATCACAAGCAGCAACAGGAGGAACTAACAGA
AATTCTGATGATATGTATAGAGCAATTGATATATACTTGGACAAGCACAGATTTCTCACT
GATTGGGAAAGGGAGGAGGTTTGCAGGGTGTTAGATTGCAGCAAAATGTCTCCTGAAGCC
TGTGAGCATGCTGCACAGAACGAAAAACTACCAGTTCGAGTGATGGTGCAGATTCTGTTT
TCTGTGCAGCTGAAGTTGAAGGATACTGTGTCCAAGAAGATACAAGGGGGTCCTGATAAC
CGATTGTTGAAGCTGGAAGACGACGAGGAAGATGCAAGGGGGACTAGCAGCAATGAAGAG
GAAATGATGAAAGCAGAGATGGAAAAGATGGGAAGCAAGGTGGTTGAGCTGGAGAAAGAA
TGCGATACGATGAAAAGGGAAATTCAAAGAGGTGGTTCCCAGCACAAGAATCAAAAGGGG
AAAACAAGCATATGGAAAGAAATGAAGAGGAAGCTTGGTTGTATGACAAGCTTGCATGAG
CCAAATTGTCATGTGAAGAAGAAAAAAGTCCATCCTCCAAAATAG