Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400004465
CDS Infomation

pacid=37440617 polypeptide=PGSC0003DMP400003187 locus=PGSC0003DMG400001780 ID=PGSC0003DMT400004465.v4.03 annot-version=v4.03
Sequence

ATGGCAGCAAAGCAAATGGAAGAAATACAGAAGAAATTGGCTACATTGAATTACCCAAGA
GCCAATGCCCCTGCTCAGTCCCTTCTCTTTGCCGGCATGGAGCGATACGCTCTTCTTGAA
TGGCTTTTCTTCAAGTTATTAGGGGATAAGTCACCATTTTCTCAGCAAAATCTACAAGGG
GATGCTGTGGATCGCGATGAGGAGACTTCCCGCATTCAGTATTTAGCAGAGATTGCAAAG
TTTCTAGGCATAACTACTACTGTTGATCCAGAAGCAATCCAAGGACGGGGTAGTTATGAA
GATCGTATGGAAATGCTACGCCTTATTGTGGATCTTGTGGAGGCAAGCATGTATGCTGAT
AACCCTGAATGGAGTGTGGATGAACAGGTGGCAAAGGATATTCAATTGATTGATGCCTTA
GCTGAAAAGCAGTCTCAAATTTTTTCAGAAGAATGCAAACTGTTTCCTGCGGATGTTCAA
ATCCAGTCTATCTATCCTTTGCCAGACATATCTGATTTGGAGAAGCAACTTTCAGATCAA
TCAAATAGGCTTCTGAGTCTTCAGGAAATGGTTGATGATTTAGCATCAAAGCATCCATAC
AACCCAGATGAGGAATATGTAGATGTTGAAGCAAAACTACGGGGACATTTGGAATCCTTT
TTAGACACTGCAAGGACCTTCAACACAATCTATACTAAGGAAATACGTCCATGGACCCAC
ATGATGGAAGTACCACAACTGCATGGGTTTGGGCCAGCTGCCAATAGACTATTGGAAGCA
TATAAGATGCTCTGGAAGTTCCTAGGAAACTTGAAGAATCTTCGGGATTCACATGCAGCT
GTAGCTGTTGGTTCCTCTGAAACAGTGGCTGGCGAGCCATCTTCCGTGACAAGAATAATC
TCCGAATGTGAAACTGCACTTACACTCTTGAATCGCGATCTTGCAATTCTTTCAGCTTCT
ATTGCCCGTGAGCGAGGTGAAGATACATCTTTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400003187
PEP Infomation

pacid=37440617 transcript=PGSC0003DMT400004465 locus=PGSC0003DMG400001780 ID=PGSC0003DMT400004465.v4.03 annot-version=v4.03
Sequence

MAAKQMEEIQKKLATLNYPRANAPAQSLLFAGMERYALLEWLFFKLLGDKSPFSQQNLQG
DAVDRDEETSRIQYLAEIAKFLGITTTVDPEAIQGRGSYEDRMEMLRLIVDLVEASMYAD
NPEWSVDEQVAKDIQLIDALAEKQSQIFSEECKLFPADVQIQSIYPLPDISDLEKQLSDQ
SNRLLSLQEMVDDLASKHPYNPDEEYVDVEAKLRGHLESFLDTARTFNTIYTKEIRPWTH
MMEVPQLHGFGPAANRLLEAYKMLWKFLGNLKNLRDSHAAVAVGSSETVAGEPSSVTRII
SECETALTLLNRDLAILSASIARERGEDTSL*

Transcript Sequence

Transcript ID

PGSC0003DMT400004465
Transcript Infomation

pacid=37440617 locus=PGSC0003DMG400001780 ID=PGSC0003DMT400004465.v4.03 annot-version=v4.03
Sequence

ATGGCAGCAAAGCAAATGGAAGAAATACAGAAGAAATTGGCTACATTGAATTACCCAAGA
GCCAATGCCCCTGCTCAGTCCCTTCTCTTTGCCGGCATGGAGCGATACGCTCTTCTTGAA
TGGCTTTTCTTCAAGTTATTAGGGGATAAGTCACCATTTTCTCAGCAAAATCTACAAGGG
GATGCTGTGGATCGCGATGAGGAGACTTCCCGCATTCAGTATTTAGCAGAGATTGCAAAG
TTTCTAGGCATAACTACTACTGTTGATCCAGAAGCAATCCAAGGACGGGGTAGTTATGAA
GATCGTATGGAAATGCTACGCCTTATTGTGGATCTTGTGGAGGCAAGCATGTATGCTGAT
AACCCTGAATGGAGTGTGGATGAACAGGTGGCAAAGGATATTCAATTGATTGATGCCTTA
GCTGAAAAGCAGTCTCAAATTTTTTCAGAAGAATGCAAACTGTTTCCTGCGGATGTTCAA
ATCCAGTCTATCTATCCTTTGCCAGACATATCTGATTTGGAGAAGCAACTTTCAGATCAA
TCAAATAGGCTTCTGAGTCTTCAGGAAATGGTTGATGATTTAGCATCAAAGCATCCATAC
AACCCAGATGAGGAATATGTAGATGTTGAAGCAAAACTACGGGGACATTTGGAATCCTTT
TTAGACACTGCAAGGACCTTCAACACAATCTATACTAAGGAAATACGTCCATGGACCCAC
ATGATGGAAGTACCACAACTGCATGGGTTTGGGCCAGCTGCCAATAGACTATTGGAAGCA
TATAAGATGCTCTGGAAGTTCCTAGGAAACTTGAAGAATCTTCGGGATTCACATGCAGCT
GTAGCTGTTGGTTCCTCTGAAACAGTGGCTGGCGAGCCATCTTCCGTGACAAGAATAATC
TCCGAATGTGAAACTGCACTTACACTCTTGAATCGCGATCTTGCAATTCTTTCAGCTTCT
ATTGCCCGTGAGCGAGGTGAAGATACATCTTTATAA