Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400004459
CDS Infomation

pacid=37455760 polypeptide=PGSC0003DMP400003182 locus=PGSC0003DMG400001776 ID=PGSC0003DMT400004459.v4.03 annot-version=v4.03
Sequence

ATGGAGACTAGTAATCAGAGGTCCTTAGCTGAAGAGGATGACAAAAACTGTACAAACAAT
CTTCATAGCAGAGTTGATCCTCCTCCTCCTCTTCTTGTTGAAAAGGTTGGTGAATCAAGT
GAAATTGTAGAGGAACTTCAACTCTGCGAACTGCAGATGAAACAACTACCTCTGGAAGTA
CCTGAAAGAACCATTGATGGACAAACAGAAGATTTTGTAAGGATAGACATGTCCACATCA
CCAGTTCAAACTCCCAAAAGAGTGATTTTCTCGCCATCACCCAGCCCTAACCATGTCAGA
TTAAATGAATCTCCAAGTCCCTCATTACCGTGGGCCAAATCATCCATTAAATCTCTCCTC
CCTAAATTAAGTTTCAAATTCCGGAATAAGACAACTGATATTGAAAAATCTGCAATGTTG
GCTCTTGGAGTCTCTCCTCTGCCTCAGGACAAACCTTCAATTTTTAGGACTCTATCTGTT
AAAAGAATTTTCAATTCAAAGATGAACAGAACTTCATCATTGCCTGTAACTCCAATTGAA
CACTCTAATCCAGAGTCAACACATGGTGACTATGGAGATGCTACATTTTATTCAGTTAAA
GCAGGAGTGCATCCCATACTTCGCTCACATTCAGTGCCAACACTGATCAAAGATGAGAGC
TCAAAACAGATGGATTACGTAGGGAGTGTCTATCGTGTAGTCCCCTCAACTCCTCTCGTG
CCAAGACATGATGATACATCACTAGATGCAACTCAAACGGTTGGCGCAGTTGAAAATGCT
AATTTTGGTGGAGACATCACTCAAGAAGAGGCTGTCTGCAGAATCTGCTTCATCGAACTT
GGGGAGGGTTCGGAAACTTTGAAGATGGAGTGTAGCTGTAAAGGCGAACTAGCCTTAGCT
CATCAAGCATGTGCTGTAAAATGGTTTAGCATAAAAGGCAACAAGATTTGTGATGTCTGT
AATCAAGAGGTTCGGAACTTACCTGTCACTCTTTTGCGGATTCAAAGTACTATTCGTAGA
GGAAATGGAGCTCCAGCTGAATCTGTCCGATACAGGGTTTGGCAGGACGTTCCTGTTCTT
GTGATTGTCAGCATGCTTGCCTACTTTTGTTTTCTGGAGCAGCTTTTGGTTACCAGAATG
GGATCCGGCGCGATCGCTATATCTCTGCCCTTTTCATGCATCTTGGGTCTCCTTGCATCC
ATGACAGCAACAACTATGGTGCAAAGGCGATATGCTTGGGTTTATGCTGTCAGTCAGTTT
GCCTTGGTGGTTCTGTTTGCTCATGTGTTCTACTCACTGCTTCGAGTGCAGGCAGTTCTA
GCTGTTCTTCTTGCCACCTTTGCGGGTTTTGGAGGTGTAATGTGTGGAACTTCTTTTCTT
CTTGAGCTTCTGAAATGGAGGAGTAGATGGAATTATTGGTCAAATGAGCCACATGATTCT
CATGAAGGGGCACAGCCAAATCAATCATCAGAAGTTACTCCTACGCCTCAGGTAGAAAGT
CAAACGCGTCGAGCTGAAGCTGGTACTTCTGGAGTGGTCAATGGAAGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400003182
PEP Infomation

pacid=37455760 transcript=PGSC0003DMT400004459 locus=PGSC0003DMG400001776 ID=PGSC0003DMT400004459.v4.03 annot-version=v4.03
Sequence

METSNQRSLAEEDDKNCTNNLHSRVDPPPPLLVEKVGESSEIVEELQLCELQMKQLPLEV
PERTIDGQTEDFVRIDMSTSPVQTPKRVIFSPSPSPNHVRLNESPSPSLPWAKSSIKSLL
PKLSFKFRNKTTDIEKSAMLALGVSPLPQDKPSIFRTLSVKRIFNSKMNRTSSLPVTPIE
HSNPESTHGDYGDATFYSVKAGVHPILRSHSVPTLIKDESSKQMDYVGSVYRVVPSTPLV
PRHDDTSLDATQTVGAVENANFGGDITQEEAVCRICFIELGEGSETLKMECSCKGELALA
HQACAVKWFSIKGNKICDVCNQEVRNLPVTLLRIQSTIRRGNGAPAESVRYRVWQDVPVL
VIVSMLAYFCFLEQLLVTRMGSGAIAISLPFSCILGLLASMTATTMVQRRYAWVYAVSQF
ALVVLFAHVFYSLLRVQAVLAVLLATFAGFGGVMCGTSFLLELLKWRSRWNYWSNEPHDS
HEGAQPNQSSEVTPTPQVESQTRRAEAGTSGVVNGS*

Transcript Sequence

Transcript ID

PGSC0003DMT400004459
Transcript Infomation

pacid=37455760 locus=PGSC0003DMG400001776 ID=PGSC0003DMT400004459.v4.03 annot-version=v4.03
Sequence

ATGGAGACTAGTAATCAGAGGTCCTTAGCTGAAGAGGATGACAAAAACTGTACAAACAAT
CTTCATAGCAGAGTTGATCCTCCTCCTCCTCTTCTTGTTGAAAAGGTTGGTGAATCAAGT
GAAATTGTAGAGGAACTTCAACTCTGCGAACTGCAGATGAAACAACTACCTCTGGAAGTA
CCTGAAAGAACCATTGATGGACAAACAGAAGATTTTGTAAGGATAGACATGTCCACATCA
CCAGTTCAAACTCCCAAAAGAGTGATTTTCTCGCCATCACCCAGCCCTAACCATGTCAGA
TTAAATGAATCTCCAAGTCCCTCATTACCGTGGGCCAAATCATCCATTAAATCTCTCCTC
CCTAAATTAAGTTTCAAATTCCGGAATAAGACAACTGATATTGAAAAATCTGCAATGTTG
GCTCTTGGAGTCTCTCCTCTGCCTCAGGACAAACCTTCAATTTTTAGGACTCTATCTGTT
AAAAGAATTTTCAATTCAAAGATGAACAGAACTTCATCATTGCCTGTAACTCCAATTGAA
CACTCTAATCCAGAGTCAACACATGGTGACTATGGAGATGCTACATTTTATTCAGTTAAA
GCAGGAGTGCATCCCATACTTCGCTCACATTCAGTGCCAACACTGATCAAAGATGAGAGC
TCAAAACAGATGGATTACGTAGGGAGTGTCTATCGTGTAGTCCCCTCAACTCCTCTCGTG
CCAAGACATGATGATACATCACTAGATGCAACTCAAACGGTTGGCGCAGTTGAAAATGCT
AATTTTGGTGGAGACATCACTCAAGAAGAGGCTGTCTGCAGAATCTGCTTCATCGAACTT
GGGGAGGGTTCGGAAACTTTGAAGATGGAGTGTAGCTGTAAAGGCGAACTAGCCTTAGCT
CATCAAGCATGTGCTGTAAAATGGTTTAGCATAAAAGGCAACAAGATTTGTGATGTCTGT
AATCAAGAGGTTCGGAACTTACCTGTCACTCTTTTGCGGATTCAAAGTACTATTCGTAGA
GGAAATGGAGCTCCAGCTGAATCTGTCCGATACAGGGTTTGGCAGGACGTTCCTGTTCTT
GTGATTGTCAGCATGCTTGCCTACTTTTGTTTTCTGGAGCAGCTTTTGGTTACCAGAATG
GGATCCGGCGCGATCGCTATATCTCTGCCCTTTTCATGCATCTTGGGTCTCCTTGCATCC
ATGACAGCAACAACTATGGTGCAAAGGCGATATGCTTGGGTTTATGCTGTCAGTCAGTTT
GCCTTGGTGGTTCTGTTTGCTCATGTGTTCTACTCACTGCTTCGAGTGCAGGCAGTTCTA
GCTGTTCTTCTTGCCACCTTTGCGGGTTTTGGAGGTGTAATGTGTGGAACTTCTTTTCTT
CTTGAGCTTCTGAAATGGAGGAGTAGATGGAATTATTGGTCAAATGAGCCACATGATTCT
CATGAAGGGGCACAGCCAAATCAATCATCAGAAGTTACTCCTACGCCTCAGGTAGAAAGT
CAAACGCGTCGAGCTGAAGCTGGTACTTCTGGAGTGGTCAATGGAAGTTGA