Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400004449
CDS Infomation

pacid=37458568 polypeptide=PGSC0003DMP400003172 locus=PGSC0003DMG400001775 ID=PGSC0003DMT400004449.v4.03 annot-version=v4.03
Sequence

ATGGGGCACAGAAATTCATTCAACATGTCTCAGATATTTGGGACGGAAGATGATCAGAGA
TGGAATGTTCCAGAGCAGGCACCTTTGCCTTTCGCAAGGGCCGGTGTTCCGGAAGGCAGT
AATATTGTTTATCCAGTGGACAGTATGTCAATTGACGGGGTACACCATTCTTCTCAGGGG
CATGCCTCTAGGCCAAGTGGATATTCTTCCTCGAATCCAAATATGGAAATTCCACACTGT
CAGCCACAGGTTCAAGGTCCTTTTCATGATCCTTTTCTGCATTCAGGTACTGGAGGCTTT
CATATGATCCATGAGAATTATCCACATCAAGCATCTTCATCAGCCCATGGCGGCCAGACA
TATCATGGGGTGGATGGCGGCCTTGTTGACCTCACAATGGGTAGTGGGAGAGGGCCGTAC
AAACGAAAGAGTCCTGGTATACCTGCAGGTGGCGAAAGTGGTAGTACAAGCAGATACTTC
GATGCTGGCAGTTCATCTGATCTCCCTTCTGACTCTTGGCAGGAAAAACAAAATCCAGAC
CCCCATTACACAACTTGGGGTTTACATCCTAGTTACAGAGGTAATAGTCTGTCTATTGGA
GGTGAGGGTTCTCAGAGGAATGTAAGAAGCAGAGCTGCATTTGATCTGCAAAATAATGTA
GGAAGGGCACATATAACAAGTACTCCTTCACATCACTCTAACAGCAGTAGAACGTCCACT
GATTATTGTAGTTCAGTGAATTATCTAGCTCCAAGTTCGAATTCTTCAGCAAGGGAATGG
AACCATGCTGTCATGCCCCCTGCAGCTGCTCATGGGAGGAACTTTGCTCCTGATGCAAGC
TTCTTTTGTTATGATATGAACCACTATGATATGGTTACCGGCAATATCTCTACCTCTCTG
GAGATGGGGAATTACCACAATGATTTCACCTCCAACAGAAGTTCCCTTCCTCAACATTTG
CCTGGCAGCTTGCCATCTTCAAGGGGAGTCCGAAGTAGCTACAGTCAAAGATCTTCCCCT
ACTTTCAGGACTTCTTCAAGCTATATGCGTCATGGGCATGTTGGGACTTCAGATGATGGA
TCACAGTTGTTTACTGAAGGTTACGCCTCAAGACATTCACGACCATTGTCTACTCTAGGA
CTGCGTAGTAGTGACCGAAATGGGAGAACTAGGGTATCTAGTGATAGGTACAGATCATTG
GCTGGTGAGGCAGGTTTCCGTGAGCAACTTGCATCTGAGGGTGTTATTATTCCAGACCGC
TCTACTTATTATGGATCCAGAAGCATGTTTGATCAGCATAGGGACATGAGACTTGACATT
GACGACATGGGCTATGAGGAACTTCTTGCTCTGGGAGAAAGAATTGGCCATGTCAATACT
GGCTTGTCGGAGGAACTGATTTCAAAGTGCATGACCGAGTCAATTTATTGTTCCTCAGAC
CAAAATCACGAGGAAGGAAATTGTGTTATCTGTTTGGAAGAGTATGTTAACATGGATGAT
GTCGGGACATTGAAATCGTGCATCCATGATTTTCATGTGGGGTGCATAAGAAGATGGCTG
TCAATGAAGAACGTGTGTCCCATCTGCAAGAAAACCGCTTTGGATGACGACGACATGAAA
GAAAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400003172
PEP Infomation

pacid=37458568 transcript=PGSC0003DMT400004449 locus=PGSC0003DMG400001775 ID=PGSC0003DMT400004449.v4.03 annot-version=v4.03
Sequence

MGHRNSFNMSQIFGTEDDQRWNVPEQAPLPFARAGVPEGSNIVYPVDSMSIDGVHHSSQG
HASRPSGYSSSNPNMEIPHCQPQVQGPFHDPFLHSGTGGFHMIHENYPHQASSSAHGGQT
YHGVDGGLVDLTMGSGRGPYKRKSPGIPAGGESGSTSRYFDAGSSSDLPSDSWQEKQNPD
PHYTTWGLHPSYRGNSLSIGGEGSQRNVRSRAAFDLQNNVGRAHITSTPSHHSNSSRTST
DYCSSVNYLAPSSNSSAREWNHAVMPPAAAHGRNFAPDASFFCYDMNHYDMVTGNISTSL
EMGNYHNDFTSNRSSLPQHLPGSLPSSRGVRSSYSQRSSPTFRTSSSYMRHGHVGTSDDG
SQLFTEGYASRHSRPLSTLGLRSSDRNGRTRVSSDRYRSLAGEAGFREQLASEGVIIPDR
STYYGSRSMFDQHRDMRLDIDDMGYEELLALGERIGHVNTGLSEELISKCMTESIYCSSD
QNHEEGNCVICLEEYVNMDDVGTLKSCIHDFHVGCIRRWLSMKNVCPICKKTALDDDDMK
EK*

Transcript Sequence

Transcript ID

PGSC0003DMT400004449
Transcript Infomation

pacid=37458568 locus=PGSC0003DMG400001775 ID=PGSC0003DMT400004449.v4.03 annot-version=v4.03
Sequence

ATGGGGCACAGAAATTCATTCAACATGTCTCAGATATTTGGGACGGAAGATGATCAGAGA
TGGAATGTTCCAGAGCAGGCACCTTTGCCTTTCGCAAGGGCCGGTGTTCCGGAAGGCAGT
AATATTGTTTATCCAGTGGACAGTATGTCAATTGACGGGGTACACCATTCTTCTCAGGGG
CATGCCTCTAGGCCAAGTGGATATTCTTCCTCGAATCCAAATATGGAAATTCCACACTGT
CAGCCACAGGTTCAAGGTCCTTTTCATGATCCTTTTCTGCATTCAGGTACTGGAGGCTTT
CATATGATCCATGAGAATTATCCACATCAAGCATCTTCATCAGCCCATGGCGGCCAGACA
TATCATGGGGTGGATGGCGGCCTTGTTGACCTCACAATGGGTAGTGGGAGAGGGCCGTAC
AAACGAAAGAGTCCTGGTATACCTGCAGGTGGCGAAAGTGGTAGTACAAGCAGATACTTC
GATGCTGGCAGTTCATCTGATCTCCCTTCTGACTCTTGGCAGGAAAAACAAAATCCAGAC
CCCCATTACACAACTTGGGGTTTACATCCTAGTTACAGAGGTAATAGTCTGTCTATTGGA
GGTGAGGGTTCTCAGAGGAATGTAAGAAGCAGAGCTGCATTTGATCTGCAAAATAATGTA
GGAAGGGCACATATAACAAGTACTCCTTCACATCACTCTAACAGCAGTAGAACGTCCACT
GATTATTGTAGTTCAGTGAATTATCTAGCTCCAAGTTCGAATTCTTCAGCAAGGGAATGG
AACCATGCTGTCATGCCCCCTGCAGCTGCTCATGGGAGGAACTTTGCTCCTGATGCAAGC
TTCTTTTGTTATGATATGAACCACTATGATATGGTTACCGGCAATATCTCTACCTCTCTG
GAGATGGGGAATTACCACAATGATTTCACCTCCAACAGAAGTTCCCTTCCTCAACATTTG
CCTGGCAGCTTGCCATCTTCAAGGGGAGTCCGAAGTAGCTACAGTCAAAGATCTTCCCCT
ACTTTCAGGACTTCTTCAAGCTATATGCGTCATGGGCATGTTGGGACTTCAGATGATGGA
TCACAGTTGTTTACTGAAGGTTACGCCTCAAGACATTCACGACCATTGTCTACTCTAGGA
CTGCGTAGTAGTGACCGAAATGGGAGAACTAGGGTATCTAGTGATAGGTACAGATCATTG
GCTGGTGAGGCAGGTTTCCGTGAGCAACTTGCATCTGAGGGTGTTATTATTCCAGACCGC
TCTACTTATTATGGATCCAGAAGCATGTTTGATCAGCATAGGGACATGAGACTTGACATT
GACGACATGGGCTATGAGGAACTTCTTGCTCTGGGAGAAAGAATTGGCCATGTCAATACT
GGCTTGTCGGAGGAACTGATTTCAAAGTGCATGACCGAGTCAATTTATTGTTCCTCAGAC
CAAAATCACGAGGAAGGAAATTGTGTTATCTGTTTGGAAGAGTATGTTAACATGGATGAT
GTCGGGACATTGAAATCGTGCATCCATGATTTTCATGTGGGGTGCATAAGAAGATGGCTG
TCAATGAAGAACGTGTGTCCCATCTGCAAGAAAACCGCTTTGGATGACGACGACATGAAA
GAAAAATGA