Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400004447
CDS Infomation

pacid=37458589 polypeptide=PGSC0003DMP400003170 locus=PGSC0003DMG400001774 ID=PGSC0003DMT400004447.v4.03 annot-version=v4.03
Sequence

ATGGCCAATTATTCAAGATTTCTCTTATTGTTATTACCTCTACTTCTTCACATTCATAGT
GTAAGAAGTGAGCTCCAATTAAAATACTACACAAAGAGTTGCCCAAGAGCTGAAGATATA
ATTAAAGAACAAGTGGCAACCTTGTACCACAAACATGGGAACACAGCAGTTTCATGGATT
AGAAATCTCTTTCATGATTGCATGGTTAAGTCATGTGATGCATCATTATATTTGGACACA
GCAAATGGGCTAGAATCAGAAAAAGAAACTCCAAGGAATTTTGGGATGAGAAATTTTAAG
TATATTGAGACTATTAAACAAGCACTTGAAAAAGAATGTCCAAATACTGTTTCTTGTGCT
GATATTGTTGCTCTTTCTGCTAGGGATGGTCTTCTTTGGTTAGGAGGGCCAATAAGAATT
GAAATGAAAACAGGAAGGAAAGACAGCAAGGAAACTTACTTTTCAGAAGTTGAGAAGTAC
CTCCCTAATCACAATGATTCAATGTCATCTGTGCTTTCAAGATTTCAATCAATTGGTATT
GATACTGAAGGAACTGTTGCTCTACTAGGGGCTCACTCTGTAGGACGAGTTCATTGTGTG
AACTTAGTCCACAGGCTTTACCCAACGGTGGACCCGACTATCGACCCCGACTACGCAAAG
TACCTTAAAGGTCGATGCACGTCACCAAACCCTGACCCGGAGGCTGTTTTATACTCGAGA
TTCGATCGCGAAACTACAATGATTTTAGACAATATATACTACAAGAATATTTTGAACAAA
AAAGGGTTATTAATTGTGGATCAAGAATTGGTTACTGATCCAAATACTTCACCATTTGTG
GTGAAAATGGCTGCTGATAATAATTATTTTCATCAACAATTTGCTAGGGCTATGCTTATT
TTGTCTGAAAATAATCCACTTATTGGAGACCAAGGTGAAATTAGAAAAGTATGTCGTTAT
GTAAATAGTGCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400003170
PEP Infomation

pacid=37458589 transcript=PGSC0003DMT400004447 locus=PGSC0003DMG400001774 ID=PGSC0003DMT400004447.v4.03 annot-version=v4.03
Sequence

MANYSRFLLLLLPLLLHIHSVRSELQLKYYTKSCPRAEDIIKEQVATLYHKHGNTAVSWI
RNLFHDCMVKSCDASLYLDTANGLESEKETPRNFGMRNFKYIETIKQALEKECPNTVSCA
DIVALSARDGLLWLGGPIRIEMKTGRKDSKETYFSEVEKYLPNHNDSMSSVLSRFQSIGI
DTEGTVALLGAHSVGRVHCVNLVHRLYPTVDPTIDPDYAKYLKGRCTSPNPDPEAVLYSR
FDRETTMILDNIYYKNILNKKGLLIVDQELVTDPNTSPFVVKMAADNNYFHQQFARAMLI
LSENNPLIGDQGEIRKVCRYVNSA*

Transcript Sequence

Transcript ID

PGSC0003DMT400004447
Transcript Infomation

pacid=37458589 locus=PGSC0003DMG400001774 ID=PGSC0003DMT400004447.v4.03 annot-version=v4.03
Sequence

ATGGCCAATTATTCAAGATTTCTCTTATTGTTATTACCTCTACTTCTTCACATTCATAGT
GTAAGAAGTGAGCTCCAATTAAAATACTACACAAAGAGTTGCCCAAGAGCTGAAGATATA
ATTAAAGAACAAGTGGCAACCTTGTACCACAAACATGGGAACACAGCAGTTTCATGGATT
AGAAATCTCTTTCATGATTGCATGGTTAAGTCATGTGATGCATCATTATATTTGGACACA
GCAAATGGGCTAGAATCAGAAAAAGAAACTCCAAGGAATTTTGGGATGAGAAATTTTAAG
TATATTGAGACTATTAAACAAGCACTTGAAAAAGAATGTCCAAATACTGTTTCTTGTGCT
GATATTGTTGCTCTTTCTGCTAGGGATGGTCTTCTTTGGTTAGGAGGGCCAATAAGAATT
GAAATGAAAACAGGAAGGAAAGACAGCAAGGAAACTTACTTTTCAGAAGTTGAGAAGTAC
CTCCCTAATCACAATGATTCAATGTCATCTGTGCTTTCAAGATTTCAATCAATTGGTATT
GATACTGAAGGAACTGTTGCTCTACTAGGGGCTCACTCTGTAGGACGAGTTCATTGTGTG
AACTTAGTCCACAGGCTTTACCCAACGGTGGACCCGACTATCGACCCCGACTACGCAAAG
TACCTTAAAGGTCGATGCACGTCACCAAACCCTGACCCGGAGGCTGTTTTATACTCGAGA
TTCGATCGCGAAACTACAATGATTTTAGACAATATATACTACAAGAATATTTTGAACAAA
AAAGGGTTATTAATTGTGGATCAAGAATTGGTTACTGATCCAAATACTTCACCATTTGTG
GTGAAAATGGCTGCTGATAATAATTATTTTCATCAACAATTTGCTAGGGCTATGCTTATT
TTGTCTGAAAATAATCCACTTATTGGAGACCAAGGTGAAATTAGAAAAGTATGTCGTTAT
GTAAATAGTGCTTAG