Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400004438
CDS Infomation

pacid=37457178 polypeptide=PGSC0003DMP400003164 locus=PGSC0003DMG400001771 ID=PGSC0003DMT400004438.v4.03 annot-version=v4.03
Sequence

ATGGAAAAAGATGCATCTTTCTTGTTTGGTGGCATATCTTTCAACCGCAAAAAGTTTGCT
CGCGATTTCGACAGATTTAAGGGGAAAAACATAGTTGATTCAGCTGAGAAATTGCAATTG
ATTGAGAAGGAGGATAAAACTTTTGATGATTCGTTAGAGAAAGTGGAGTTCGTCGAGAAT
GAGATATCTGAAATGGAGGATGAGACAAGTACTAGCGTGAGTAAGAAGAGGAAGAGGAAG
GAGAAGGGAACAGTTTCTGATTCAGTGGAAGGATTTTCCGTCTTCAAGAGTTCAAAATTG
AAAAAGGAAGCTGCCAGCGAAGAGACTGATCAATCTGTAAATGAACTGATTCAGGGAAAG
AAAGAATATTATCAACAATTGGAGAGGGACGCAATTTTTCGGAAGATGCACAACATTCAT
GTTTCAGGGAGTAACATCCCTTCGCCATTGCACAATTTTGCTGAATTAAGATCAAGATAT
AAATGTCGATCATATCTATTACGAAATCTGGCAAAACTGGGATTTAAAGAACCAACGCCA
ATCCAAAGGCAGACTATTCCAGTCCTCTTATCTGGGCGGGAATGCTTTGCTTGTGCACCT
ACTGGTTCTGGCAAAACATTTGCTTTTGTTTTTCCTATACTTATGAAACTCAAGCACACT
TCAAAGGATGGTGTCCGAGCTGTAATTCTTTCCCCTACAAGAGAGTTAGCTGCTCAGACA
ACAAGAGAATGCAAAAAGTTGGCCAGGAAGAAGTTCTACATCAGGTTGATGACTAAACAA
CTCGCTAAAAGTGGGGACTTTTCTAAACTGCGATGTGATGTACTGATCTCGACACCATTG
CGCTTAAAGTTCGCTATCCAAAAAAGAAAGCTTGATTTAAGTAGGGTTGAATTTCTTGTC
TTAGATGAGTCTGATAAGCTTTTCGAGCCTGGCATGCTAGAGCAGGTTGATTTTGTGGTG
AAGGCGTGCACAAATCCTTCAATTCTTCGGTCATTGTTCAGTGCTACTTTACCCGATATA
GTTGAAGACCGAGCACGTACAATAATGCATGATGCTGTTCGAATAATTATTGGTAGGAAA
AATTCGGCTTCTGAAACAATAGAGCAAAAATTGGTATATGTAGGAAGTGAAGAAGGGAAG
CTTCTGGCTCTTCGTCAAAGCTTTGCAGAGAGTTTGAACCCACCAGTGCTAGTATTTGTT
CAAAACAAGGAGCGTGCAAAGGAGCTATATGACGAGCTAAAATTGGAAGATATTCGACCC
GATGTTATCCATTCAGACCTTTCTCAGATACAGAGAGAAAATGCTATTGATAACTTTAGA
GCTGGAAAAACATGGGTTTTAATTGCCACTGATGTTGTTGCCCGGGGTATGGATTTCAAA
GGGGTCAACTGCGTGATAAATTATGATTTCCCAGACGCTGCTGCAGCATATATTCACAGA
ATTGGACGTTCTGGCAGAGCAGGAAGGAGTGGACAGGCGATAACATTTTATACTGAAGCA
GATATTCCATTTTTGAGGAACATCGCAAATGTTATTACGTCTTCTGGTGGTGAGGTTCCA
GAGTGGATCATGTCTCTGACCAAGAAAAAGTGGAGGAAACACAGACCAAAAAGAGAAACC
ATTTCAACTCAGCCAGACATATGA

Peptide Sequence

PEP ID

PGSC0003DMP400003164
PEP Infomation

pacid=37457178 transcript=PGSC0003DMT400004438 locus=PGSC0003DMG400001771 ID=PGSC0003DMT400004438.v4.03 annot-version=v4.03
Sequence

MEKDASFLFGGISFNRKKFARDFDRFKGKNIVDSAEKLQLIEKEDKTFDDSLEKVEFVEN
EISEMEDETSTSVSKKRKRKEKGTVSDSVEGFSVFKSSKLKKEAASEETDQSVNELIQGK
KEYYQQLERDAIFRKMHNIHVSGSNIPSPLHNFAELRSRYKCRSYLLRNLAKLGFKEPTP
IQRQTIPVLLSGRECFACAPTGSGKTFAFVFPILMKLKHTSKDGVRAVILSPTRELAAQT
TRECKKLARKKFYIRLMTKQLAKSGDFSKLRCDVLISTPLRLKFAIQKRKLDLSRVEFLV
LDESDKLFEPGMLEQVDFVVKACTNPSILRSLFSATLPDIVEDRARTIMHDAVRIIIGRK
NSASETIEQKLVYVGSEEGKLLALRQSFAESLNPPVLVFVQNKERAKELYDELKLEDIRP
DVIHSDLSQIQRENAIDNFRAGKTWVLIATDVVARGMDFKGVNCVINYDFPDAAAAYIHR
IGRSGRAGRSGQAITFYTEADIPFLRNIANVITSSGGEVPEWIMSLTKKKWRKHRPKRET
ISTQPDI*

Transcript Sequence

Transcript ID

PGSC0003DMT400004438
Transcript Infomation

pacid=37457178 locus=PGSC0003DMG400001771 ID=PGSC0003DMT400004438.v4.03 annot-version=v4.03
Sequence

ATGGAAAAAGATGCATCTTTCTTGTTTGGTGGCATATCTTTCAACCGCAAAAAGTTTGCT
CGCGATTTCGACAGATTTAAGGGGAAAAACATAGTTGATTCAGCTGAGAAATTGCAATTG
ATTGAGAAGGAGGATAAAACTTTTGATGATTCGTTAGAGAAAGTGGAGTTCGTCGAGAAT
GAGATATCTGAAATGGAGGATGAGACAAGTACTAGCGTGAGTAAGAAGAGGAAGAGGAAG
GAGAAGGGAACAGTTTCTGATTCAGTGGAAGGATTTTCCGTCTTCAAGAGTTCAAAATTG
AAAAAGGAAGCTGCCAGCGAAGAGACTGATCAATCTGTAAATGAACTGATTCAGGGAAAG
AAAGAATATTATCAACAATTGGAGAGGGACGCAATTTTTCGGAAGATGCACAACATTCAT
GTTTCAGGGAGTAACATCCCTTCGCCATTGCACAATTTTGCTGAATTAAGATCAAGATAT
AAATGTCGATCATATCTATTACGAAATCTGGCAAAACTGGGATTTAAAGAACCAACGCCA
ATCCAAAGGCAGACTATTCCAGTCCTCTTATCTGGGCGGGAATGCTTTGCTTGTGCACCT
ACTGGTTCTGGCAAAACATTTGCTTTTGTTTTTCCTATACTTATGAAACTCAAGCACACT
TCAAAGGATGGTGTCCGAGCTGTAATTCTTTCCCCTACAAGAGAGTTAGCTGCTCAGACA
ACAAGAGAATGCAAAAAGTTGGCCAGGAAGAAGTTCTACATCAGGTTGATGACTAAACAA
CTCGCTAAAAGTGGGGACTTTTCTAAACTGCGATGTGATGTACTGATCTCGACACCATTG
CGCTTAAAGTTCGCTATCCAAAAAAGAAAGCTTGATTTAAGTAGGGTTGAATTTCTTGTC
TTAGATGAGTCTGATAAGCTTTTCGAGCCTGGCATGCTAGAGCAGGTTGATTTTGTGGTG
AAGGCGTGCACAAATCCTTCAATTCTTCGGTCATTGTTCAGTGCTACTTTACCCGATATA
GTTGAAGACCGAGCACGTACAATAATGCATGATGCTGTTCGAATAATTATTGGTAGGAAA
AATTCGGCTTCTGAAACAATAGAGCAAAAATTGGTATATGTAGGAAGTGAAGAAGGGAAG
CTTCTGGCTCTTCGTCAAAGCTTTGCAGAGAGTTTGAACCCACCAGTGCTAGTATTTGTT
CAAAACAAGGAGCGTGCAAAGGAGCTATATGACGAGCTAAAATTGGAAGATATTCGACCC
GATGTTATCCATTCAGACCTTTCTCAGATACAGAGAGAAAATGCTATTGATAACTTTAGA
GCTGGAAAAACATGGGTTTTAATTGCCACTGATGTTGTTGCCCGGGGTATGGATTTCAAA
GGGGTCAACTGCGTGATAAATTATGATTTCCCAGACGCTGCTGCAGCATATATTCACAGA
ATTGGACGTTCTGGCAGAGCAGGAAGGAGTGGACAGGCGATAACATTTTATACTGAAGCA
GATATTCCATTTTTGAGGAACATCGCAAATGTTATTACGTCTTCTGGTGGTGAGGTTCCA
GAGTGGATCATGTCTCTGACCAAGAAAAAGTGGAGGAAACACAGACCAAAAAGAGAAACC
ATTTCAACTCAGCCAGACATATGA