Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400004436
CDS Infomation

pacid=37454812 polypeptide=PGSC0003DMP400003162 locus=PGSC0003DMG400001770 ID=PGSC0003DMT400004436.v4.03 annot-version=v4.03
Sequence

ATGAATTACTTAACAAAATCAATAGCAAAAAAGGCCTTTTTCTCCTCTTCATCTCCCCAA
AAATGCCAACTTTTACTGCAAACCCTCAGTTCAAGATTTGCCTCTACAACCATTTCTAAG
CCAAGAAAACCCAAAATCCCTAAACCCCAAGAACCCTCTTCATCTTATGTGCTTACCCAT
CCAAGAATTGAGATTTATGATGAAGCAGAAGATGTGTCTTCTTGGCCAAAGCCAAGTGAG
ATACCTTACCAAGCAAAAGTTGCAAATTCTGTTAATCTTGTTGGTTTTGTGCAAACCCCA
GTTCATTTTGAAGCTTCCTCTGATGGGAAATATTGTGCTAGTACTGTTGTTGCTCATGAG
AATAGTGATGATAACTCTGTTTTGATGATTCCTGTTGTGTTTGCTGGTGATTTAGCTCAT
GTTGTTGCTTGTCATGTTAAGGAAAATGATTGTGTTTATGTGTATGGGAAGTTCTCTATG
GAACCATTGTCTTGTGAATTCATGGATGAATATCAGTCTTGTTTTCATATTGTTGCTGAA
AATGTCAACTTTGTGCAGGGTCTGAAACGAAATGTTTCCCTCAAGGGAAATGTAAAATCA
GTTTATCCGAAAGGTAAGAACTTTGTGTTGGATGAAAACGATAACCAGCATTCTGATTAT
TTGGTCAAACAGAAAGATAGGTTGTCTGGTTTAGAATATGATGATTCTGTTAATTTGGGT
GAGAGCAAGTCGGAGGAAGGTGTTACGGGAGGTGATGATTGGAGAGACCTTATTAAGAAT
CCGAAACAATGGTGGGATTGTCGAAAGGCGAAGTTAGATGGAATTGTGAAAGCAAGGCAC
CCTGATTTCAAGAAGAAGGATAGTAGTACTTCTCTATGGATTGAGAATACTCCAAGGTGG
GTTCTTGAGGGACTTGAAGGACTTGAATTCGATGCTTATGCTCCTAAATCTAAAAGCATT
GGGAAGGACGTTGATTCTTGGAAAGATTTGCTGGAGAATCCTGATAAATGGTGGGACAAC
AGAGCTAGTAAATTGAATCAGAAAGCACCTGATTTTAAGCACAAGAATACCGGTATAGGG
CTTTGGGTCGGTAGCTCACCAGATTGGGTGTTGTCTCAGTTGCCACCATTGAGGGATCAA
CGAGCTGCTTCTTCAGACAAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400003162
PEP Infomation

pacid=37454812 transcript=PGSC0003DMT400004436 locus=PGSC0003DMG400001770 ID=PGSC0003DMT400004436.v4.03 annot-version=v4.03
Sequence

MNYLTKSIAKKAFFSSSSPQKCQLLLQTLSSRFASTTISKPRKPKIPKPQEPSSSYVLTH
PRIEIYDEAEDVSSWPKPSEIPYQAKVANSVNLVGFVQTPVHFEASSDGKYCASTVVAHE
NSDDNSVLMIPVVFAGDLAHVVACHVKENDCVYVYGKFSMEPLSCEFMDEYQSCFHIVAE
NVNFVQGLKRNVSLKGNVKSVYPKGKNFVLDENDNQHSDYLVKQKDRLSGLEYDDSVNLG
ESKSEEGVTGGDDWRDLIKNPKQWWDCRKAKLDGIVKARHPDFKKKDSSTSLWIENTPRW
VLEGLEGLEFDAYAPKSKSIGKDVDSWKDLLENPDKWWDNRASKLNQKAPDFKHKNTGIG
LWVGSSPDWVLSQLPPLRDQRAASSDK*

Transcript Sequence

Transcript ID

PGSC0003DMT400004436
Transcript Infomation

pacid=37454812 locus=PGSC0003DMG400001770 ID=PGSC0003DMT400004436.v4.03 annot-version=v4.03
Sequence

ATGAATTACTTAACAAAATCAATAGCAAAAAAGGCCTTTTTCTCCTCTTCATCTCCCCAA
AAATGCCAACTTTTACTGCAAACCCTCAGTTCAAGATTTGCCTCTACAACCATTTCTAAG
CCAAGAAAACCCAAAATCCCTAAACCCCAAGAACCCTCTTCATCTTATGTGCTTACCCAT
CCAAGAATTGAGATTTATGATGAAGCAGAAGATGTGTCTTCTTGGCCAAAGCCAAGTGAG
ATACCTTACCAAGCAAAAGTTGCAAATTCTGTTAATCTTGTTGGTTTTGTGCAAACCCCA
GTTCATTTTGAAGCTTCCTCTGATGGGAAATATTGTGCTAGTACTGTTGTTGCTCATGAG
AATAGTGATGATAACTCTGTTTTGATGATTCCTGTTGTGTTTGCTGGTGATTTAGCTCAT
GTTGTTGCTTGTCATGTTAAGGAAAATGATTGTGTTTATGTGTATGGGAAGTTCTCTATG
GAACCATTGTCTTGTGAATTCATGGATGAATATCAGTCTTGTTTTCATATTGTTGCTGAA
AATGTCAACTTTGTGCAGGGTCTGAAACGAAATGTTTCCCTCAAGGGAAATGTAAAATCA
GTTTATCCGAAAGGTAAGAACTTTGTGTTGGATGAAAACGATAACCAGCATTCTGATTAT
TTGGTCAAACAGAAAGATAGGTTGTCTGGTTTAGAATATGATGATTCTGTTAATTTGGGT
GAGAGCAAGTCGGAGGAAGGTGTTACGGGAGGTGATGATTGGAGAGACCTTATTAAGAAT
CCGAAACAATGGTGGGATTGTCGAAAGGCGAAGTTAGATGGAATTGTGAAAGCAAGGCAC
CCTGATTTCAAGAAGAAGGATAGTAGTACTTCTCTATGGATTGAGAATACTCCAAGGTGG
GTTCTTGAGGGACTTGAAGGACTTGAATTCGATGCTTATGCTCCTAAATCTAAAAGCATT
GGGAAGGACGTTGATTCTTGGAAAGATTTGCTGGAGAATCCTGATAAATGGTGGGACAAC
AGAGCTAGTAAATTGAATCAGAAAGCACCTGATTTTAAGCACAAGAATACCGGTATAGGG
CTTTGGGTCGGTAGCTCACCAGATTGGGTGTTGTCTCAGTTGCCACCATTGAGGGATCAA
CGAGCTGCTTCTTCAGACAAGTAG