Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400004415
CDS Infomation

pacid=37458725 polypeptide=PGSC0003DMP400003148 locus=PGSC0003DMG400001760 ID=PGSC0003DMT400004415.v4.03 annot-version=v4.03
Sequence

ATGCAGACACCAAAAGGAAGGACTGTTTCTGTGGAAGTGCCTCAAAGGACATCTGCTGCT
ACACTAAAGACAGCTCGAAAGCTCAGGACTCCAGGGTCAGATGGTGATTCTGTTTCATCT
CCGAATCCAGCCAACAGAACACCTAAAGATAGGAGTCCAAAAGTTGTTTGTCGCCGGTCA
CCACGGAGTCCAGTGATAGAGAAGAAGCGTCCTGTCAAAGCATCTGACTTGGAAACGCAA
CTTGCTCAACTCCAAGATGAGGTAAAGAAGGCGAAGGACCAGCTGAGTTCTTCTGAATCA
TTGAAGAAAAGGGCTCAACAGGATGCTGATGAAGCTAAAAAGCAGCTTGCAGTCATGTCA
GAAAAGCTCGAGGACTCTAAGAAGCAGCTGCTTGATCTCTCAGATTCAGAAGAAGCTCGA
CTGCTGGAGTTGCGCAAGATATCACAGGATCGAGACCGAGCATGGCAATCTGAGCTTGAG
GCTATCCAGAAGCAGCATGAGTTGGACTCTGCTGCTTTGTCCTCTGCCATGAATGAAATA
CAGAAACTTAAACTTCAGCTGGACCGGGTGGCTGATTGTGAAGCCGCTCAAGCTCATCAT
GCTGAGTCAGCTTATGTTGAGATACAAAGCTTAAGGATTGAACTTACAAAGACCCTTACA
TTGGTTGATAAACTGAGAAACCAGCTTAACGATAGCAAGGAATCTGAGGCTTGTTCATTT
GAAGAAGTGAGCAAAGCTCAGACGCAGCTGGAAGTGGCCAAGATGACCGAGGATACTCTA
CGTTCTGAAGGTCTGAAAGCAATGGAGGCTTGCAGGACCTTGTCTTTGGAGTTGGAAAAA
TCAAAGGATCGAGTAGCTTCATTGGAGGAGCTTGTCAGCAAACTCCAGTCTGGTCTGGTA
GGCTCTTCCGAAAGTTCTGTAGCTGCAAAAGAAAACAGCTTAAATGTAGAAGCTGAGAAA
CTAAACATTGAGCTGAGTACCATCCAAGTTGAGGTAAGTCAATTAAGAGCTGCTTTGGAG
GATTCAGAGAGAAAGTATCAGGAAGAATACATACAGAACACCTTGCAGACACGAAGTGCT
TATGAGCTGGTGGAGCGCACAAAATCCGAATCACTTCAGAGGGAGGCTGAATGGGAGGCA
ATACTAAATGAAGCAAAATCGGAAGTGGAAGAGTTGAAAGAAAAATTGATGAACATAGAA
GCTCAACTTGTTGATATTTCGGATGTGAATAAGGGGCTGAGTCTGCATGTTGAGCAAATG
CAGTCAGCTGATAAAGAATTTGAATTAGCTGCTCAACTGAATAAATCAGAGTCAATTTTG
GGAGATCTGAGAGCAAGTTTATTAGACAAAGAGACAGAGTTGCTGAGTCTTATGGAGGAG
AATGAGCAGTTGAAGTTGGAAATCAGTAAGAGGGAATCAGAGAGTACCAAAGTTAGCGAC
GAGGCACTTGCCTTAGTAGAAGAAGCAAAAACTGCAGAAAGAGAGGCCCTGATGAAGCTG
GGAGATTTGACTGAGGAAGCAGATAAAAGCGGCAGAAAGGTAACTCGTGTCACTGAGGAG
TTGAATGCAGCACAGGCTGCAAACTCGGAGATTGAAACTGAGCTAAGGAGGTTAAAAGTG
CAATGTGATCAATGGAGAAAGGCTGCTGAAGCAGCTGCATCTATACTTTCAACTGGAAAT
AACGGGAAATATGTCGAGAGAACAGGTTCTTTAGACTACCACACTATCGGTGGAAAGCTT
GGTTCTCCACTCTTGGACGACTTGGATGATGACTCACCAAAGAAGAAGAATAACAACATG
TTGAAGAAACTCGGTTTTTTATTGAAAAAGGGCCAGAAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400003148
PEP Infomation

pacid=37458725 transcript=PGSC0003DMT400004415 locus=PGSC0003DMG400001760 ID=PGSC0003DMT400004415.v4.03 annot-version=v4.03
Sequence

MQTPKGRTVSVEVPQRTSAATLKTARKLRTPGSDGDSVSSPNPANRTPKDRSPKVVCRRS
PRSPVIEKKRPVKASDLETQLAQLQDEVKKAKDQLSSSESLKKRAQQDADEAKKQLAVMS
EKLEDSKKQLLDLSDSEEARLLELRKISQDRDRAWQSELEAIQKQHELDSAALSSAMNEI
QKLKLQLDRVADCEAAQAHHAESAYVEIQSLRIELTKTLTLVDKLRNQLNDSKESEACSF
EEVSKAQTQLEVAKMTEDTLRSEGLKAMEACRTLSLELEKSKDRVASLEELVSKLQSGLV
GSSESSVAAKENSLNVEAEKLNIELSTIQVEVSQLRAALEDSERKYQEEYIQNTLQTRSA
YELVERTKSESLQREAEWEAILNEAKSEVEELKEKLMNIEAQLVDISDVNKGLSLHVEQM
QSADKEFELAAQLNKSESILGDLRASLLDKETELLSLMEENEQLKLEISKRESESTKVSD
EALALVEEAKTAEREALMKLGDLTEEADKSGRKVTRVTEELNAAQAANSEIETELRRLKV
QCDQWRKAAEAAASILSTGNNGKYVERTGSLDYHTIGGKLGSPLLDDLDDDSPKKKNNNM
LKKLGFLLKKGQK*

Transcript Sequence

Transcript ID

PGSC0003DMT400004415
Transcript Infomation

pacid=37458725 locus=PGSC0003DMG400001760 ID=PGSC0003DMT400004415.v4.03 annot-version=v4.03
Sequence

ATGCAGACACCAAAAGGAAGGACTGTTTCTGTGGAAGTGCCTCAAAGGACATCTGCTGCT
ACACTAAAGACAGCTCGAAAGCTCAGGACTCCAGGGTCAGATGGTGATTCTGTTTCATCT
CCGAATCCAGCCAACAGAACACCTAAAGATAGGAGTCCAAAAGTTGTTTGTCGCCGGTCA
CCACGGAGTCCAGTGATAGAGAAGAAGCGTCCTGTCAAAGCATCTGACTTGGAAACGCAA
CTTGCTCAACTCCAAGATGAGGTAAAGAAGGCGAAGGACCAGCTGAGTTCTTCTGAATCA
TTGAAGAAAAGGGCTCAACAGGATGCTGATGAAGCTAAAAAGCAGCTTGCAGTCATGTCA
GAAAAGCTCGAGGACTCTAAGAAGCAGCTGCTTGATCTCTCAGATTCAGAAGAAGCTCGA
CTGCTGGAGTTGCGCAAGATATCACAGGATCGAGACCGAGCATGGCAATCTGAGCTTGAG
GCTATCCAGAAGCAGCATGAGTTGGACTCTGCTGCTTTGTCCTCTGCCATGAATGAAATA
CAGAAACTTAAACTTCAGCTGGACCGGGTGGCTGATTGTGAAGCCGCTCAAGCTCATCAT
GCTGAGTCAGCTTATGTTGAGATACAAAGCTTAAGGATTGAACTTACAAAGACCCTTACA
TTGGTTGATAAACTGAGAAACCAGCTTAACGATAGCAAGGAATCTGAGGCTTGTTCATTT
GAAGAAGTGAGCAAAGCTCAGACGCAGCTGGAAGTGGCCAAGATGACCGAGGATACTCTA
CGTTCTGAAGGTCTGAAAGCAATGGAGGCTTGCAGGACCTTGTCTTTGGAGTTGGAAAAA
TCAAAGGATCGAGTAGCTTCATTGGAGGAGCTTGTCAGCAAACTCCAGTCTGGTCTGGTA
GGCTCTTCCGAAAGTTCTGTAGCTGCAAAAGAAAACAGCTTAAATGTAGAAGCTGAGAAA
CTAAACATTGAGCTGAGTACCATCCAAGTTGAGGTAAGTCAATTAAGAGCTGCTTTGGAG
GATTCAGAGAGAAAGTATCAGGAAGAATACATACAGAACACCTTGCAGACACGAAGTGCT
TATGAGCTGGTGGAGCGCACAAAATCCGAATCACTTCAGAGGGAGGCTGAATGGGAGGCA
ATACTAAATGAAGCAAAATCGGAAGTGGAAGAGTTGAAAGAAAAATTGATGAACATAGAA
GCTCAACTTGTTGATATTTCGGATGTGAATAAGGGGCTGAGTCTGCATGTTGAGCAAATG
CAGTCAGCTGATAAAGAATTTGAATTAGCTGCTCAACTGAATAAATCAGAGTCAATTTTG
GGAGATCTGAGAGCAAGTTTATTAGACAAAGAGACAGAGTTGCTGAGTCTTATGGAGGAG
AATGAGCAGTTGAAGTTGGAAATCAGTAAGAGGGAATCAGAGAGTACCAAAGTTAGCGAC
GAGGCACTTGCCTTAGTAGAAGAAGCAAAAACTGCAGAAAGAGAGGCCCTGATGAAGCTG
GGAGATTTGACTGAGGAAGCAGATAAAAGCGGCAGAAAGGTAACTCGTGTCACTGAGGAG
TTGAATGCAGCACAGGCTGCAAACTCGGAGATTGAAACTGAGCTAAGGAGGTTAAAAGTG
CAATGTGATCAATGGAGAAAGGCTGCTGAAGCAGCTGCATCTATACTTTCAACTGGAAAT
AACGGGAAATATGTCGAGAGAACAGGTTCTTTAGACTACCACACTATCGGTGGAAAGCTT
GGTTCTCCACTCTTGGACGACTTGGATGATGACTCACCAAAGAAGAAGAATAACAACATG
TTGAAGAAACTCGGTTTTTTATTGAAAAAGGGCCAGAAGTAA