Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400004379
CDS Infomation

pacid=37454973 polypeptide=PGSC0003DMP400003120 locus=PGSC0003DMG400001739 ID=PGSC0003DMT400004379.v4.03 annot-version=v4.03
Sequence

ATGGCGGATGTTGCAGTTGCGAAGTCATGGAGAGACGAGCTAGCGAGTTTAGTGGAGGAT
AGTGGGATAAGGTTTGCCGGAGATGCTGTAGAAATCTCTGCTCCGACGTATTCTACGCCG
GCGTTTGAGGAGAAGAGATCGGTGTATGAGTCGCCGGCGATTGAGGAGGTTGTAGCGGAG
CCGGAGAGTTTTAAGGACCAAATCGAAGGTTTCGCGAAGGCCTGGGGAGAAATGTTGCTG
GAATTGATGAGAGGTTGTAGAGATGTGGTGCAACAAAGCTTGTTGACTGAGGAATCTTAC
ATTGTGCAGAAAACTAAGGGTCCTTTAGCTGAAGCTTCCAGGAGGTTGAGTGTTTTGAAC
GAGTTTTTGCCGGAAGATCGTGATCCAGTGCATGCTTGGCCGGTGATTTTCTTCGTCTTC
ATCCTCGCCCTGTCCGCATTGAGTGTAAATAGTAAACAAGAAACCTCAGGCAAGCCAGTG
AAAGAAGTGCACATACATCCTCCTAGTGCTACTCGTATACTGCTTCCAGACGGCAGACAT
ATGGCATACCAGGAGATAGGAGTTCCATCAAACAAAGCTAGATATTCTGTAATTGCTCCA
CATGGCTTCCTCTCTTCTCGACTTGGAGGTATACCTGGAGTGAAAGTATCACTTCTTGAA
GAGTTTGGCATTCGTTTGGTAACTTATGACCTTCCAGGTTTTGGAGAGAGTGATTCACAC
CCTGAGCGGAACCTTAACTCATCTGCTCTGGACATGCAATACTTGGCTGATGCCTTAGGA
GTTAATAGTAAATTCTGGGTTTTGGGCTACTCAAGTGGAGCAATACATGCTTGGGCTGCA
ATGAAATTTATATCTGACCGAGTTGCTGGTGTAGCTATGTTTTCCCCATTTATCAACCCA
TATGAATCAAGCATGACCAAAGAAGAGACGAGAGAAACTTGGAACAAGTGGACAAGGAAA
AGGAAATTGACATACTACTTAGCTCGAAGATCTCCAAAATTTCTTGATTACTTCTATCAC
CGGACATTTCTATCTGGAAAGCATGGTCAAATTGATAAATACATGTCTCTGTCGCTGGGA
CAAAAGGATAAAGCGCTGATCAGAGAACCAGCCTTTGAAGAGTTTTGGCACAGGGATGTT
GAGGAATCAATACGTCAGGGCAGCACTAAGCCATTTATAGAGGAAGCTTCACTTCAGGTG
TCAAATTGGGGGTTTAACCTTGTGGATCTTCAAGTGCAAGAAAAGTGTTCTGGTAAAGGG
ATTCTATCATGGCTTAAGTTTGGTTATGGTCAAGTGAGGTGCGAATTGACTGGATTTCTA
GGACCAGTTCACATATGGCAGGGATTGGATGATCAGGTTGTACCACACCAAATGACCGAC
TATGTAGCTAGAATTCTGCCAAGAGTGGTGGTGCACAAGCTTCCTGATGAGGGCCACTTT
TCCTATTTCTTCTTCTGTGACGAATGCCATAGACAAATGTTCCTGACCATTTTCGGAAGC
CCTCAGGGGCTTCTTGAAGAGAGCATTGAAGCTCCAACGGAAGAAGATGGAGAACAGGAA
GCTGCAAATCTCAATTTGGCAGCAGAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400003120
PEP Infomation

pacid=37454973 transcript=PGSC0003DMT400004379 locus=PGSC0003DMG400001739 ID=PGSC0003DMT400004379.v4.03 annot-version=v4.03
Sequence

MADVAVAKSWRDELASLVEDSGIRFAGDAVEISAPTYSTPAFEEKRSVYESPAIEEVVAE
PESFKDQIEGFAKAWGEMLLELMRGCRDVVQQSLLTEESYIVQKTKGPLAEASRRLSVLN
EFLPEDRDPVHAWPVIFFVFILALSALSVNSKQETSGKPVKEVHIHPPSATRILLPDGRH
MAYQEIGVPSNKARYSVIAPHGFLSSRLGGIPGVKVSLLEEFGIRLVTYDLPGFGESDSH
PERNLNSSALDMQYLADALGVNSKFWVLGYSSGAIHAWAAMKFISDRVAGVAMFSPFINP
YESSMTKEETRETWNKWTRKRKLTYYLARRSPKFLDYFYHRTFLSGKHGQIDKYMSLSLG
QKDKALIREPAFEEFWHRDVEESIRQGSTKPFIEEASLQVSNWGFNLVDLQVQEKCSGKG
ILSWLKFGYGQVRCELTGFLGPVHIWQGLDDQVVPHQMTDYVARILPRVVVHKLPDEGHF
SYFFFCDECHRQMFLTIFGSPQGLLEESIEAPTEEDGEQEAANLNLAAE*

Transcript Sequence

Transcript ID

PGSC0003DMT400004379
Transcript Infomation

pacid=37454973 locus=PGSC0003DMG400001739 ID=PGSC0003DMT400004379.v4.03 annot-version=v4.03
Sequence

ATGGCGGATGTTGCAGTTGCGAAGTCATGGAGAGACGAGCTAGCGAGTTTAGTGGAGGAT
AGTGGGATAAGGTTTGCCGGAGATGCTGTAGAAATCTCTGCTCCGACGTATTCTACGCCG
GCGTTTGAGGAGAAGAGATCGGTGTATGAGTCGCCGGCGATTGAGGAGGTTGTAGCGGAG
CCGGAGAGTTTTAAGGACCAAATCGAAGGTTTCGCGAAGGCCTGGGGAGAAATGTTGCTG
GAATTGATGAGAGGTTGTAGAGATGTGGTGCAACAAAGCTTGTTGACTGAGGAATCTTAC
ATTGTGCAGAAAACTAAGGGTCCTTTAGCTGAAGCTTCCAGGAGGTTGAGTGTTTTGAAC
GAGTTTTTGCCGGAAGATCGTGATCCAGTGCATGCTTGGCCGGTGATTTTCTTCGTCTTC
ATCCTCGCCCTGTCCGCATTGAGTGTAAATAGTAAACAAGAAACCTCAGGCAAGCCAGTG
AAAGAAGTGCACATACATCCTCCTAGTGCTACTCGTATACTGCTTCCAGACGGCAGACAT
ATGGCATACCAGGAGATAGGAGTTCCATCAAACAAAGCTAGATATTCTGTAATTGCTCCA
CATGGCTTCCTCTCTTCTCGACTTGGAGGTATACCTGGAGTGAAAGTATCACTTCTTGAA
GAGTTTGGCATTCGTTTGGTAACTTATGACCTTCCAGGTTTTGGAGAGAGTGATTCACAC
CCTGAGCGGAACCTTAACTCATCTGCTCTGGACATGCAATACTTGGCTGATGCCTTAGGA
GTTAATAGTAAATTCTGGGTTTTGGGCTACTCAAGTGGAGCAATACATGCTTGGGCTGCA
ATGAAATTTATATCTGACCGAGTTGCTGGTGTAGCTATGTTTTCCCCATTTATCAACCCA
TATGAATCAAGCATGACCAAAGAAGAGACGAGAGAAACTTGGAACAAGTGGACAAGGAAA
AGGAAATTGACATACTACTTAGCTCGAAGATCTCCAAAATTTCTTGATTACTTCTATCAC
CGGACATTTCTATCTGGAAAGCATGGTCAAATTGATAAATACATGTCTCTGTCGCTGGGA
CAAAAGGATAAAGCGCTGATCAGAGAACCAGCCTTTGAAGAGTTTTGGCACAGGGATGTT
GAGGAATCAATACGTCAGGGCAGCACTAAGCCATTTATAGAGGAAGCTTCACTTCAGGTG
TCAAATTGGGGGTTTAACCTTGTGGATCTTCAAGTGCAAGAAAAGTGTTCTGGTAAAGGG
ATTCTATCATGGCTTAAGTTTGGTTATGGTCAAGTGAGGTGCGAATTGACTGGATTTCTA
GGACCAGTTCACATATGGCAGGGATTGGATGATCAGGTTGTACCACACCAAATGACCGAC
TATGTAGCTAGAATTCTGCCAAGAGTGGTGGTGCACAAGCTTCCTGATGAGGGCCACTTT
TCCTATTTCTTCTTCTGTGACGAATGCCATAGACAAATGTTCCTGACCATTTTCGGAAGC
CCTCAGGGGCTTCTTGAAGAGAGCATTGAAGCTCCAACGGAAGAAGATGGAGAACAGGAA
GCTGCAAATCTCAATTTGGCAGCAGAATGA