Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400004370
CDS Infomation

pacid=37456511 polypeptide=PGSC0003DMP400003117 locus=PGSC0003DMG400001736 ID=PGSC0003DMT400004370.v4.03 annot-version=v4.03
Sequence

ATGGCAGCGGCGGCAGAGGACTGGGCAGGATTGCCTCATGATCTCCTTGTTCTGATTGCA
AAGCATGTTAAAGTGATGGAAGATTTCATTGCTTTCAGTGGTGTTTGTACCTCATGGCGA
ACTGCTTCTACTAAGGACAATTTTGATATGCTTTATCCCCAACTTCCTTTACTAATGCTC
CCTGATAAAGATGACGATTATCGAGAATTTTACTCTCTTTCCAAAGGTAAAGTTTCGCGT
AGATTGTACCTCCCTGAGGCTAAAGGCCGAGAATGTTTCCCGTCTGATCAGATGGGATGG
CTTCTCACCCAATCATTAGACGGAAAAGAGGTCAGTTTGTTGAATCCTTTCTCACGTACC
CAAATTCAACTTCCAAATCAATTTGCCTTAAGTGGTTTTCTAGGTTTAGAAGAAGAGGAG
GAGGAGGAAGAAGAAGAAGAAAAGGAATATCGTTACATCAGAAACGCTATTTTATCTGCC
AATCCATCGTTTACATCAGATTATGTACTCGTCATTGCATATAACACAGATGTTAATCAT
TTGGCTTTTTGGCGACCTGGAGATATTAATTGGACTGAATTTGAAATTGTTTATAGAATC
GGTGGAGTCTCCAATATGATTTACTACAAGAGCAGATTCTATCTTGTTTCTTGGAGCGCT
GAAATAGGTATCATTGATGTTCAAGACGGTCCTGAACCACGCGTAGAATCGCGCTTGATT
TATCTTAACGATAATCGGGACTTGTTTTCACAAGGTGATGTTCAATACTATCTTGTTGAG
GTAAATGATGCACTATTACTTGTTGTCCGATTTGGTAGAAAGCGTCCAAATATTGAAGAT
GGCCTGGACACTTTTAAATGTGAAGTATATGAATTAGATGCAATAGAAGGTAAGTTGAAA
GAGATTAACGACTTGGGAGATTCAACTATTTTTTTGGGTCTCAATGGAGCAACTTCCATT
GATTCCCCTAAATTTACCGGAGTTAAGCCTAATCATATATATTTTACTGACGATTGGTTT
GAAGAGAACTACTTTTTGGAATGTGGCGGTGGAACAGACACAGGGGCTTACAATCTTGAA
GATGGAAGTATTGAATCTTTTTATCCTGAATTATCACTAAGTCGTCCTTGTCCGCCAACT
TGGGTTATACCATCATTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400003117
PEP Infomation

pacid=37456511 transcript=PGSC0003DMT400004370 locus=PGSC0003DMG400001736 ID=PGSC0003DMT400004370.v4.03 annot-version=v4.03
Sequence

MAAAAEDWAGLPHDLLVLIAKHVKVMEDFIAFSGVCTSWRTASTKDNFDMLYPQLPLLML
PDKDDDYREFYSLSKGKVSRRLYLPEAKGRECFPSDQMGWLLTQSLDGKEVSLLNPFSRT
QIQLPNQFALSGFLGLEEEEEEEEEEEKEYRYIRNAILSANPSFTSDYVLVIAYNTDVNH
LAFWRPGDINWTEFEIVYRIGGVSNMIYYKSRFYLVSWSAEIGIIDVQDGPEPRVESRLI
YLNDNRDLFSQGDVQYYLVEVNDALLLVVRFGRKRPNIEDGLDTFKCEVYELDAIEGKLK
EINDLGDSTIFLGLNGATSIDSPKFTGVKPNHIYFTDDWFEENYFLECGGGTDTGAYNLE
DGSIESFYPELSLSRPCPPTWVIPSL*

Transcript Sequence

Transcript ID

PGSC0003DMT400004370
Transcript Infomation

pacid=37456511 locus=PGSC0003DMG400001736 ID=PGSC0003DMT400004370.v4.03 annot-version=v4.03
Sequence

ATGGCAGCGGCGGCAGAGGACTGGGCAGGATTGCCTCATGATCTCCTTGTTCTGATTGCA
AAGCATGTTAAAGTGATGGAAGATTTCATTGCTTTCAGTGGTGTTTGTACCTCATGGCGA
ACTGCTTCTACTAAGGACAATTTTGATATGCTTTATCCCCAACTTCCTTTACTAATGCTC
CCTGATAAAGATGACGATTATCGAGAATTTTACTCTCTTTCCAAAGGTAAAGTTTCGCGT
AGATTGTACCTCCCTGAGGCTAAAGGCCGAGAATGTTTCCCGTCTGATCAGATGGGATGG
CTTCTCACCCAATCATTAGACGGAAAAGAGGTCAGTTTGTTGAATCCTTTCTCACGTACC
CAAATTCAACTTCCAAATCAATTTGCCTTAAGTGGTTTTCTAGGTTTAGAAGAAGAGGAG
GAGGAGGAAGAAGAAGAAGAAAAGGAATATCGTTACATCAGAAACGCTATTTTATCTGCC
AATCCATCGTTTACATCAGATTATGTACTCGTCATTGCATATAACACAGATGTTAATCAT
TTGGCTTTTTGGCGACCTGGAGATATTAATTGGACTGAATTTGAAATTGTTTATAGAATC
GGTGGAGTCTCCAATATGATTTACTACAAGAGCAGATTCTATCTTGTTTCTTGGAGCGCT
GAAATAGGTATCATTGATGTTCAAGACGGTCCTGAACCACGCGTAGAATCGCGCTTGATT
TATCTTAACGATAATCGGGACTTGTTTTCACAAGGTGATGTTCAATACTATCTTGTTGAG
GTAAATGATGCACTATTACTTGTTGTCCGATTTGGTAGAAAGCGTCCAAATATTGAAGAT
GGCCTGGACACTTTTAAATGTGAAGTATATGAATTAGATGCAATAGAAGGTAAGTTGAAA
GAGATTAACGACTTGGGAGATTCAACTATTTTTTTGGGTCTCAATGGAGCAACTTCCATT
GATTCCCCTAAATTTACCGGAGTTAAGCCTAATCATATATATTTTACTGACGATTGGTTT
GAAGAGAACTACTTTTTGGAATGTGGCGGTGGAACAGACACAGGGGCTTACAATCTTGAA
GATGGAAGTATTGAATCTTTTTATCCTGAATTATCACTAAGTCGTCCTTGTCCGCCAACT
TGGGTTATACCATCATTATGA