Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400004354
CDS Infomation

pacid=37437229 polypeptide=PGSC0003DMP400003103 locus=PGSC0003DMG400001725 ID=PGSC0003DMT400004354.v4.03 annot-version=v4.03
Sequence

ATGTGGAGAAGAGCTTTCTGTAATCTCTCAAAAAGACCGTTTTCTTCACAATCTGAAATA
CCCACTTTGTATTCCTTTCTCCAGCCTTCAATTTTCTCCTTAAAAAGATATGAATCACCT
TCTACAACCCCACCAAAACCCCATGACCAAACCCCTCTAACCTTAACACAAGAACACAAA
TCTAATCTTGAATCCACTCTTCAAGATTCAATCAAAAGTAACAACACAGATGAAGCATGG
AAATCATTCAAGACTCTTTCAAATTACTCTGCTTTCCCAAGTAAGTCACTTACCAATTCA
GTAATCACTCATTTGTCATCATTGAATGATACCCATAACATAAAAAGAGCATTTGCATCA
GTAGTTTTCTTGTTAGAGAAGAAACAAGAATTGTTAAAGCCTGAAACTGTACATGTACTG
TTGAATTCAATGAGGGAAGCTAATAGTGCTGCCCCTGCTTTTGCATTGGTGAAGTGTATG
TTCAAGAACAGATTTTTCATCCCTTTTAGTCTGTGGGGTGATGTTCTTGTGGAGATTTGT
AGGAAAAATGGCAACTTTGGTGGGTTTTTACAAGTTTTTAATGAGAATTGTAGGGTTGCT
ATTGATGAGAAGTTGAATTTCTTGAAACCCAGTTTGGCAGCTTGTAATGCTGCACTAGAA
TGTTGTTGTCGAGAGGTTGAATCGATTACTGATGCAGAGAAAGTGGTGGAAACCATGTCA
GTTTTGGGTGTTAGGCCTGATGAATGTAGTTTTGGTTTACTAGCTTATTTGTATGCATTG
AAGGGTCTTAAAGAGAAAATAGCTGAGTTAGAAGGTTTAATAAGTGGATTTGGTTTCCCG
GATAAAGGGGTTTTTCTTAGTAACTTGATTAGCGGATTTGTAAAGTGTGGTAATTTGGCG
TCTGTTTCAGCAACTATTCTTCAAGGTGTAAGAGAAACGGATGGACAAGGATTTTGTTTT
CAAAAAGTAACTTATAGTGAAGTAGTAAGTGGGTTTCTTCAAAATGGGAGCATAAAAGAT
TTAGCTGCGTTGATTGGTGAAACTCAGACCTTGGAATCTCCATCTGTGATTGTTGAGAGA
TCCGTTGGATATGGCATCATAAATGCTTGCGTTAATCTTGGGTTATTGGACAAGGCACAC
ATGATATTTGATGAAATGAATGCTCAGGGTGCTTCTTTAGGTCTTGGAGTCTACCTTCCA
ATACTGAAAGCATATTGCAAAGAGCAAAGAACTGCTGAAGCAGCTCAACTGGTGACAGAC
ATAAGCGGTTTAGGTCTCCAGTTGGATGTTGCTACCTATGATGCTCTAATTGAAGCTTCA
ATGTCATGTCAAGATTTTCAATCTGCATTTTCTGTGTTTAGGGACATGAGAGAAGCAAGA
ATACCTGACTTGCAAGGGAGTTACTTGACAATCATGACCGGTTTAACAGAAAGTCATCGA
CCTGAGCTCATGTCAGCTTTCTTGGATGAGATCGTTGAGGATCCTAGAATTGAAATCGGA
ACGCATGATTGGAATTCCATCATCCATGCCTTCTGCAAGGCTGGACGGCTAGAAGATGCA
AGGAGGACTTTCAGGAGAATGACCTTCCTTCAGTTCGAACCAAATGAGCAGACATATCTT
TCTCTAATAAATGGAAATATGACCGTGGAGAAGTATTTCAATGTTATGATGCTGTGGAAT
GAAGTCAAAAGAAAGGTTTCTGCAGAAGGGGAAACAAAGTTAAAACTAGATAGTAGCCTG
GTTGATGCGTTTCTGTATGCATTGGTTAAAGGGGGCTTCTTTGATGCAGTAATGCAAGTC
GTGGAGAAATCTCAAGAGAGGAAAATTTTTGTTGATAAATGGAGATATAAACAAGCATTC
ATGGAGAAACATAAGAAGCTCAGAGTTTCAAAGTTAAGAAGGAAAAATCGCGGTAAAATG
GAGGCACTTATTGCTTTCAAAAATTGGGCGGGTTTGAGTGCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400003103
PEP Infomation

pacid=37437229 transcript=PGSC0003DMT400004354 locus=PGSC0003DMG400001725 ID=PGSC0003DMT400004354.v4.03 annot-version=v4.03
Sequence

MWRRAFCNLSKRPFSSQSEIPTLYSFLQPSIFSLKRYESPSTTPPKPHDQTPLTLTQEHK
SNLESTLQDSIKSNNTDEAWKSFKTLSNYSAFPSKSLTNSVITHLSSLNDTHNIKRAFAS
VVFLLEKKQELLKPETVHVLLNSMREANSAAPAFALVKCMFKNRFFIPFSLWGDVLVEIC
RKNGNFGGFLQVFNENCRVAIDEKLNFLKPSLAACNAALECCCREVESITDAEKVVETMS
VLGVRPDECSFGLLAYLYALKGLKEKIAELEGLISGFGFPDKGVFLSNLISGFVKCGNLA
SVSATILQGVRETDGQGFCFQKVTYSEVVSGFLQNGSIKDLAALIGETQTLESPSVIVER
SVGYGIINACVNLGLLDKAHMIFDEMNAQGASLGLGVYLPILKAYCKEQRTAEAAQLVTD
ISGLGLQLDVATYDALIEASMSCQDFQSAFSVFRDMREARIPDLQGSYLTIMTGLTESHR
PELMSAFLDEIVEDPRIEIGTHDWNSIIHAFCKAGRLEDARRTFRRMTFLQFEPNEQTYL
SLINGNMTVEKYFNVMMLWNEVKRKVSAEGETKLKLDSSLVDAFLYALVKGGFFDAVMQV
VEKSQERKIFVDKWRYKQAFMEKHKKLRVSKLRRKNRGKMEALIAFKNWAGLSA*

Transcript Sequence

Transcript ID

PGSC0003DMT400004354
Transcript Infomation

pacid=37437229 locus=PGSC0003DMG400001725 ID=PGSC0003DMT400004354.v4.03 annot-version=v4.03
Sequence

ATGTGGAGAAGAGCTTTCTGTAATCTCTCAAAAAGACCGTTTTCTTCACAATCTGAAATA
CCCACTTTGTATTCCTTTCTCCAGCCTTCAATTTTCTCCTTAAAAAGATATGAATCACCT
TCTACAACCCCACCAAAACCCCATGACCAAACCCCTCTAACCTTAACACAAGAACACAAA
TCTAATCTTGAATCCACTCTTCAAGATTCAATCAAAAGTAACAACACAGATGAAGCATGG
AAATCATTCAAGACTCTTTCAAATTACTCTGCTTTCCCAAGTAAGTCACTTACCAATTCA
GTAATCACTCATTTGTCATCATTGAATGATACCCATAACATAAAAAGAGCATTTGCATCA
GTAGTTTTCTTGTTAGAGAAGAAACAAGAATTGTTAAAGCCTGAAACTGTACATGTACTG
TTGAATTCAATGAGGGAAGCTAATAGTGCTGCCCCTGCTTTTGCATTGGTGAAGTGTATG
TTCAAGAACAGATTTTTCATCCCTTTTAGTCTGTGGGGTGATGTTCTTGTGGAGATTTGT
AGGAAAAATGGCAACTTTGGTGGGTTTTTACAAGTTTTTAATGAGAATTGTAGGGTTGCT
ATTGATGAGAAGTTGAATTTCTTGAAACCCAGTTTGGCAGCTTGTAATGCTGCACTAGAA
TGTTGTTGTCGAGAGGTTGAATCGATTACTGATGCAGAGAAAGTGGTGGAAACCATGTCA
GTTTTGGGTGTTAGGCCTGATGAATGTAGTTTTGGTTTACTAGCTTATTTGTATGCATTG
AAGGGTCTTAAAGAGAAAATAGCTGAGTTAGAAGGTTTAATAAGTGGATTTGGTTTCCCG
GATAAAGGGGTTTTTCTTAGTAACTTGATTAGCGGATTTGTAAAGTGTGGTAATTTGGCG
TCTGTTTCAGCAACTATTCTTCAAGGTGTAAGAGAAACGGATGGACAAGGATTTTGTTTT
CAAAAAGTAACTTATAGTGAAGTAGTAAGTGGGTTTCTTCAAAATGGGAGCATAAAAGAT
TTAGCTGCGTTGATTGGTGAAACTCAGACCTTGGAATCTCCATCTGTGATTGTTGAGAGA
TCCGTTGGATATGGCATCATAAATGCTTGCGTTAATCTTGGGTTATTGGACAAGGCACAC
ATGATATTTGATGAAATGAATGCTCAGGGTGCTTCTTTAGGTCTTGGAGTCTACCTTCCA
ATACTGAAAGCATATTGCAAAGAGCAAAGAACTGCTGAAGCAGCTCAACTGGTGACAGAC
ATAAGCGGTTTAGGTCTCCAGTTGGATGTTGCTACCTATGATGCTCTAATTGAAGCTTCA
ATGTCATGTCAAGATTTTCAATCTGCATTTTCTGTGTTTAGGGACATGAGAGAAGCAAGA
ATACCTGACTTGCAAGGGAGTTACTTGACAATCATGACCGGTTTAACAGAAAGTCATCGA
CCTGAGCTCATGTCAGCTTTCTTGGATGAGATCGTTGAGGATCCTAGAATTGAAATCGGA
ACGCATGATTGGAATTCCATCATCCATGCCTTCTGCAAGGCTGGACGGCTAGAAGATGCA
AGGAGGACTTTCAGGAGAATGACCTTCCTTCAGTTCGAACCAAATGAGCAGACATATCTT
TCTCTAATAAATGGAAATATGACCGTGGAGAAGTATTTCAATGTTATGATGCTGTGGAAT
GAAGTCAAAAGAAAGGTTTCTGCAGAAGGGGAAACAAAGTTAAAACTAGATAGTAGCCTG
GTTGATGCGTTTCTGTATGCATTGGTTAAAGGGGGCTTCTTTGATGCAGTAATGCAAGTC
GTGGAGAAATCTCAAGAGAGGAAAATTTTTGTTGATAAATGGAGATATAAACAAGCATTC
ATGGAGAAACATAAGAAGCTCAGAGTTTCAAAGTTAAGAAGGAAAAATCGCGGTAAAATG
GAGGCACTTATTGCTTTCAAAAATTGGGCGGGTTTGAGTGCTTGA