Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400004330
CDS Infomation

pacid=37441164 polypeptide=PGSC0003DMP400003089 locus=PGSC0003DMG401001720 ID=PGSC0003DMT400004330.v4.03 annot-version=v4.03
Sequence

ATGGGTTCCAGTAGCAGTCGTATAAGATCATCATCATCCGGGTCCAGGTCCAGGTCCAGG
TCCAGGTCCAGGTCAGGGTCAAGACCTAAACGGAGCAAGCTCAAATTTTCCTCTTTTTTC
TGTGGTGGTGCCTCCACTTCTCAGTTGGACCATGAGCTTGAAGATTATCCCCAACCTCTG
GTTGGTGATTTTTCCCGGAATTCTATAGCAGAATCTTCTTCAACATTCAGTTCAGAAGTT
GGTCATGCTACTCAACCTGAGACAGGATCCTCATCAGAAAGCACTAGTGGTCTTAGTCAT
GATGCTTTTGTTGAATATAATTTGATAAATGCCGAAGTGAACATCAATAATACATGCATT
TCAAATGAAAAACATTCAATATGTGACCAGGCTAGAGACAGCTTGGCTGCAGCTGTTAGT
ACTGAATCTTTGACACACTTGAATACTGAAGACTCTCACACTGTGCCAGAAGAGTGCAGA
AGCTCATGTTCACATGGGGATTCAATCGAGAATCACGGGGATGTGCATATTGAGTCAAGT
TCTGATTCTAGATCTATTTCTGTTACTTCTGACTCTATACCAAGGCATCAATTTCTCGAG
GGTGATACCTCTGAAGAAGCAACAACTTCAGGTTCGGGATTTCTTTTGCTGGATAGTGAG
CTTGGAGTAAACTCATCTCAAGATGTGCTACATGTTGATGTGGTGAGTATCTCTTCCAAC
ATTTTATCTAGTAGCATTGCTGATATAGGTAGTCAAGAAACAAGAAGAAACAGTAGGCGG
CTCTTTTGGGATGCTATATCAAGACTCAGTTTAAGAAGGCATAGTGATTCTCCAACCATT
GTTTTCGCAACTGGTCATGCTGATGATCTAGGATCTCGTGACAGATGGCTAATTGATTTG
AATGGTGATCTCCATTATGATGGGGTTGGATTTGATTCTGGTTATGGGGCTGGTAGGAAT
CATCGCAGAAGTGAACAAAGACAGACAACAAGATCTGAGACATCTGAAAGAGTTCTTGAA
GGCCTTGGTAACCGAGTTCCACAACAAAATCTTTGCTCATCAGGCCTTCATCCTGATGGT
TCATGTTCGTGTGAACCATTACTTACAACTGAAGAGTTCAGTACCCTTGCAAGTATTTCA
CGAATAATTATACTAGCAGAGGCCTTATTTGAGGTCCTCGATGAGATCCATCAACAATCT
TTCACACTTTCGCTATCTACGCTCTCGCTTCCAGCTCCAGATTCTGTTGTGGACTCATTT
CCTCTCAAGTCTCACAAGAAGTTAGGAGCTATAGACAATGCTCCCACTGATATCCAACAG
TGCCACATTTGTTTGGCTGAGTATGAGGAGGGAGACAAACTGAGGGTGCTCCCTTGTCGC
CATGAATATCATATGCATTGTATCGATAAATGGCTTAAGGAAGTAAACCGGGTCTGCCCA
GTTTGCAGGTGCAATGTTTGTGAGAATCCCGCGATTGGTTCTGTCTCGAATTCAGAAGCT
TCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400003089
PEP Infomation

pacid=37441164 transcript=PGSC0003DMT400004330 locus=PGSC0003DMG401001720 ID=PGSC0003DMT400004330.v4.03 annot-version=v4.03
Sequence

MGSSSSRIRSSSSGSRSRSRSRSRSGSRPKRSKLKFSSFFCGGASTSQLDHELEDYPQPL
VGDFSRNSIAESSSTFSSEVGHATQPETGSSSESTSGLSHDAFVEYNLINAEVNINNTCI
SNEKHSICDQARDSLAAAVSTESLTHLNTEDSHTVPEECRSSCSHGDSIENHGDVHIESS
SDSRSISVTSDSIPRHQFLEGDTSEEATTSGSGFLLLDSELGVNSSQDVLHVDVVSISSN
ILSSSIADIGSQETRRNSRRLFWDAISRLSLRRHSDSPTIVFATGHADDLGSRDRWLIDL
NGDLHYDGVGFDSGYGAGRNHRRSEQRQTTRSETSERVLEGLGNRVPQQNLCSSGLHPDG
SCSCEPLLTTEEFSTLASISRIIILAEALFEVLDEIHQQSFTLSLSTLSLPAPDSVVDSF
PLKSHKKLGAIDNAPTDIQQCHICLAEYEEGDKLRVLPCRHEYHMHCIDKWLKEVNRVCP
VCRCNVCENPAIGSVSNSEAS*

Transcript Sequence

Transcript ID

PGSC0003DMT400004330
Transcript Infomation

pacid=37441164 locus=PGSC0003DMG401001720 ID=PGSC0003DMT400004330.v4.03 annot-version=v4.03
Sequence

ATGGGTTCCAGTAGCAGTCGTATAAGATCATCATCATCCGGGTCCAGGTCCAGGTCCAGG
TCCAGGTCCAGGTCAGGGTCAAGACCTAAACGGAGCAAGCTCAAATTTTCCTCTTTTTTC
TGTGGTGGTGCCTCCACTTCTCAGTTGGACCATGAGCTTGAAGATTATCCCCAACCTCTG
GTTGGTGATTTTTCCCGGAATTCTATAGCAGAATCTTCTTCAACATTCAGTTCAGAAGTT
GGTCATGCTACTCAACCTGAGACAGGATCCTCATCAGAAAGCACTAGTGGTCTTAGTCAT
GATGCTTTTGTTGAATATAATTTGATAAATGCCGAAGTGAACATCAATAATACATGCATT
TCAAATGAAAAACATTCAATATGTGACCAGGCTAGAGACAGCTTGGCTGCAGCTGTTAGT
ACTGAATCTTTGACACACTTGAATACTGAAGACTCTCACACTGTGCCAGAAGAGTGCAGA
AGCTCATGTTCACATGGGGATTCAATCGAGAATCACGGGGATGTGCATATTGAGTCAAGT
TCTGATTCTAGATCTATTTCTGTTACTTCTGACTCTATACCAAGGCATCAATTTCTCGAG
GGTGATACCTCTGAAGAAGCAACAACTTCAGGTTCGGGATTTCTTTTGCTGGATAGTGAG
CTTGGAGTAAACTCATCTCAAGATGTGCTACATGTTGATGTGGTGAGTATCTCTTCCAAC
ATTTTATCTAGTAGCATTGCTGATATAGGTAGTCAAGAAACAAGAAGAAACAGTAGGCGG
CTCTTTTGGGATGCTATATCAAGACTCAGTTTAAGAAGGCATAGTGATTCTCCAACCATT
GTTTTCGCAACTGGTCATGCTGATGATCTAGGATCTCGTGACAGATGGCTAATTGATTTG
AATGGTGATCTCCATTATGATGGGGTTGGATTTGATTCTGGTTATGGGGCTGGTAGGAAT
CATCGCAGAAGTGAACAAAGACAGACAACAAGATCTGAGACATCTGAAAGAGTTCTTGAA
GGCCTTGGTAACCGAGTTCCACAACAAAATCTTTGCTCATCAGGCCTTCATCCTGATGGT
TCATGTTCGTGTGAACCATTACTTACAACTGAAGAGTTCAGTACCCTTGCAAGTATTTCA
CGAATAATTATACTAGCAGAGGCCTTATTTGAGGTCCTCGATGAGATCCATCAACAATCT
TTCACACTTTCGCTATCTACGCTCTCGCTTCCAGCTCCAGATTCTGTTGTGGACTCATTT
CCTCTCAAGTCTCACAAGAAGTTAGGAGCTATAGACAATGCTCCCACTGATATCCAACAG
TGCCACATTTGTTTGGCTGAGTATGAGGAGGGAGACAAACTGAGGGTGCTCCCTTGTCGC
CATGAATATCATATGCATTGTATCGATAAATGGCTTAAGGAAGTAAACCGGGTCTGCCCA
GTTTGCAGGTGCAATGTTTGTGAGAATCCCGCGATTGGTTCTGTCTCGAATTCAGAAGCT
TCTTAA