Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400004251
CDS Infomation

pacid=37435984 polypeptide=PGSC0003DMP400003039 locus=PGSC0003DMG400001692 ID=PGSC0003DMT400004251.v4.03 annot-version=v4.03
Sequence

ATGGAAACAGAACAATTACTGATAATTTCATCACTAGTTTTATGTGGATCTCTGGGGTTG
TTCTTTGCACATGTCACCAATTTTTTACTTTTACATCCAAGAAAATTGAGATCAAAACTT
CAAAGCCAAGGGATTAAGGGACCTTCTTCACCATCTTTTCTCTATGGAAATATCAAGAAA
CAGGCAACCCCAGAAGAAACCAACAATCAAGAATTACAAGAAAACAAACATACATGGCCT
TCCAGAGTGTTTTCACATATAAAACAGTGGCAAATTGAATATGGATCAATATTCATGTAT
TCATCTGGAACCATACAGATACTATGTGTAACTGATGCAGATATGGTGAAAGAGATATCT
TTGAACCTGGGAAAACCATCTTACTTATCCAAAGATCATGGTCCTCTTCTAGGCCAAGGC
ATTTTCTCTTCAAATGGCCCTTACTGGGCTCATCAGAGAAAGATCATTGCCCCTGAATTC
TATCTCAACAAGGTTAAGGAAATGGTGAAACTGATGGTTGAATCCACCAGTAATATGATA
GAATCATGGGATGAGAGAACAAGAAATTCAGTAGGAAAATCGGAGGTTAAGGTGGACGAT
GATCTCAAGAGTTTGTCAGCAGATATAATCTCAAGAGCTTGTTTCGGAAGCAGCTATGCT
GAGGGGGAACAGATGTTCCTAAAACTTCAAACACTTCAAATGGTTATGTCCAAAGTTCCC
ATTGGAGTTCCTGGATTGAGGCATATTCCAAGTAAACATAATAGGGAGATATGGAGATTG
GACAAAGAGATTAAAGCAATGATATTGAAGATAGTACGAGCACGGAGAAGCCCTACTCAT
GAGAAAAACCTTCTGAAACTGATACTTGATGCTGCTAAGAGTTATGAAGAGAGTGGTGGT
GATCAGCTACCAGCTGACGTTTCTGCTGAAATGTTCATTGTTGATAATTGCAAGAGCATA
TACTTTGCTGGCCATGAGAACACTGGTCTCACAGCATCATGGTGTTTGATGCTACTAGCT
GCATATCCAGAATGGCAAGCTCGTGCCCGTGCTGAGGTGCTTGATGTGTGTGGTAGTGAG
TTGCCAAATGATTCTATGCTTAGACAAATGAAAGTGCTGACAATGATCATCCATGAAACG
TTACGTTTGTACCCACCAGTAGCATTCGTGGTGAGAGAAGCATTGCAGGATATAAGTATC
GAGAGAATTGAGATTCCAAAAGGGACTAATATTGAGATTCCAATCCCAATCCTGCATCGG
CAGCCTGAACTCTGGGGACAAGATACCTATCAGTTCAATCCAGAAAGATTTGCCAAGGGC
ATTGCAAAGGCTTGCAAAGTCCCAAGTGCTTATATACCATTTGGCATAGGGAGTAGAACC
TGTGTGGGGCAAAATTTTGCAATGATTGAACTGAAGGTGATTGTATCGATGATTTTGTCT
AGGTTTACATTTTCGTTGTCACCAGGATATCAACACAGCCCTGTTTTTAGATTAGTATTA
GAACCTGAGCATGGCATCTATTTGTATCTCCAAAGAATTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400003039
PEP Infomation

pacid=37435984 transcript=PGSC0003DMT400004251 locus=PGSC0003DMG400001692 ID=PGSC0003DMT400004251.v4.03 annot-version=v4.03
Sequence

METEQLLIISSLVLCGSLGLFFAHVTNFLLLHPRKLRSKLQSQGIKGPSSPSFLYGNIKK
QATPEETNNQELQENKHTWPSRVFSHIKQWQIEYGSIFMYSSGTIQILCVTDADMVKEIS
LNLGKPSYLSKDHGPLLGQGIFSSNGPYWAHQRKIIAPEFYLNKVKEMVKLMVESTSNMI
ESWDERTRNSVGKSEVKVDDDLKSLSADIISRACFGSSYAEGEQMFLKLQTLQMVMSKVP
IGVPGLRHIPSKHNREIWRLDKEIKAMILKIVRARRSPTHEKNLLKLILDAAKSYEESGG
DQLPADVSAEMFIVDNCKSIYFAGHENTGLTASWCLMLLAAYPEWQARARAEVLDVCGSE
LPNDSMLRQMKVLTMIIHETLRLYPPVAFVVREALQDISIERIEIPKGTNIEIPIPILHR
QPELWGQDTYQFNPERFAKGIAKACKVPSAYIPFGIGSRTCVGQNFAMIELKVIVSMILS
RFTFSLSPGYQHSPVFRLVLEPEHGIYLYLQRI*

Transcript Sequence

Transcript ID

PGSC0003DMT400004251
Transcript Infomation

pacid=37435984 locus=PGSC0003DMG400001692 ID=PGSC0003DMT400004251.v4.03 annot-version=v4.03
Sequence

ATGGAAACAGAACAATTACTGATAATTTCATCACTAGTTTTATGTGGATCTCTGGGGTTG
TTCTTTGCACATGTCACCAATTTTTTACTTTTACATCCAAGAAAATTGAGATCAAAACTT
CAAAGCCAAGGGATTAAGGGACCTTCTTCACCATCTTTTCTCTATGGAAATATCAAGAAA
CAGGCAACCCCAGAAGAAACCAACAATCAAGAATTACAAGAAAACAAACATACATGGCCT
TCCAGAGTGTTTTCACATATAAAACAGTGGCAAATTGAATATGGATCAATATTCATGTAT
TCATCTGGAACCATACAGATACTATGTGTAACTGATGCAGATATGGTGAAAGAGATATCT
TTGAACCTGGGAAAACCATCTTACTTATCCAAAGATCATGGTCCTCTTCTAGGCCAAGGC
ATTTTCTCTTCAAATGGCCCTTACTGGGCTCATCAGAGAAAGATCATTGCCCCTGAATTC
TATCTCAACAAGGTTAAGGAAATGGTGAAACTGATGGTTGAATCCACCAGTAATATGATA
GAATCATGGGATGAGAGAACAAGAAATTCAGTAGGAAAATCGGAGGTTAAGGTGGACGAT
GATCTCAAGAGTTTGTCAGCAGATATAATCTCAAGAGCTTGTTTCGGAAGCAGCTATGCT
GAGGGGGAACAGATGTTCCTAAAACTTCAAACACTTCAAATGGTTATGTCCAAAGTTCCC
ATTGGAGTTCCTGGATTGAGGCATATTCCAAGTAAACATAATAGGGAGATATGGAGATTG
GACAAAGAGATTAAAGCAATGATATTGAAGATAGTACGAGCACGGAGAAGCCCTACTCAT
GAGAAAAACCTTCTGAAACTGATACTTGATGCTGCTAAGAGTTATGAAGAGAGTGGTGGT
GATCAGCTACCAGCTGACGTTTCTGCTGAAATGTTCATTGTTGATAATTGCAAGAGCATA
TACTTTGCTGGCCATGAGAACACTGGTCTCACAGCATCATGGTGTTTGATGCTACTAGCT
GCATATCCAGAATGGCAAGCTCGTGCCCGTGCTGAGGTGCTTGATGTGTGTGGTAGTGAG
TTGCCAAATGATTCTATGCTTAGACAAATGAAAGTGCTGACAATGATCATCCATGAAACG
TTACGTTTGTACCCACCAGTAGCATTCGTGGTGAGAGAAGCATTGCAGGATATAAGTATC
GAGAGAATTGAGATTCCAAAAGGGACTAATATTGAGATTCCAATCCCAATCCTGCATCGG
CAGCCTGAACTCTGGGGACAAGATACCTATCAGTTCAATCCAGAAAGATTTGCCAAGGGC
ATTGCAAAGGCTTGCAAAGTCCCAAGTGCTTATATACCATTTGGCATAGGGAGTAGAACC
TGTGTGGGGCAAAATTTTGCAATGATTGAACTGAAGGTGATTGTATCGATGATTTTGTCT
AGGTTTACATTTTCGTTGTCACCAGGATATCAACACAGCCCTGTTTTTAGATTAGTATTA
GAACCTGAGCATGGCATCTATTTGTATCTCCAAAGAATTTGA