Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400004200
CDS Infomation

pacid=37438814 polypeptide=PGSC0003DMP400003002 locus=PGSC0003DMG400001674 ID=PGSC0003DMT400004200.v4.03 annot-version=v4.03
Sequence

ATGTCGGAAGTGGTTTCTATGGAAGAAATCAGAGCTATATCTGATAGGCTTGGTGTGGAT
CTTACACAAATCGATCTGGACTCTATTCATCTTCCCCCTGGTGATGATTTGGGGATACCC
AGTGACGATGAAGACTTGTTGGAGGAGGACGCCTTGGAGGAGGATCAAGGTTTTGGAAAC
ATACTGGTGGTGGACAATCTTCCAGTTGTGCCTAAAGAGAAATATGAGAAATTGGAAGGA
GTAGTTCGGAAAATTTACAGCCAACTTGGTGTTATTAAGGAGGGTGGTCTCTATATGCCT
ATTGATCCTGAGACTCAGAAAACACTTGGGTACTGCTTTATAGAGTATAATACTCCTCAG
GAAGCTGAGCTGAGTAAGGAGAAGACACATGGATACAAGTTAGATAGGTCACATATATTT
GCTGTTAACATGTTTGAAGACATTGAGAAGTTCCTGAAAGTTCCAGATGAGTGGGCTCCG
CCAGAGATCAAGCCTTATGTTCCAGGGGAGATGCTTCTAAAGTGGCTTACTGATGAGAAA
GCTAGAGATCAGTACGTGATTCGGTCTGGCGGTGACACGGAGGTCCTCTGGAATGATGCA
AGACAAATGAAGCCTGAGCTTGTTTATAAACGTCCTTATTGGACTGAGAGTTTTGTTCAA
TGGTCCCCTATGGGAACTTACTTGGCAACAGTTCACAGACAAGGCGCTGCAATTTGGGGT
GGTGCCACCACTTTCAACCGCCTCATGCGTTATGCACATCCTCAGGTAAAGCTGATTGAT
TTCTCCCCCGGTGAGAGATATCTGGTGACATACAGCAGCCATGAACCAAGTAACCCTCGT
GACACCCACAGGGTTGTGCTAAATATTTTTGATGTGAGAACTGGAAAAGTGATGAGAGAT
TTTAAGGGAAGTGCTGATGAATTTGCAGTTGGAGGAACTGGAGGTGTTACTGGTGTGTCC
TGGCCAGTCTTTAGGTGGAGTGGTGGTAAAGAGGATAAGTATTTTGCAAGAATAGGAAAG
AATGTCATCTCTGTTTATGAAACAGAGACTTTCTCACTTATTGACAAGAAATCTATCAAG
GTTGAAAATGTTATGGATTTTAGCTGGTCACCAACAGATCCAATTCTTTCACTCTTTGTT
CCTGAATGCGGAAATCAACCTGCCAGGGTAAGTCTTGTGCAAATCCCAAGTAAAGAGGAG
TTGAGGCAAAAGAATCTCTTCAGTGTAAGTGATTGCAAAATGTATTGGCAAAGCAATGGA
GACTACCTTGCTGTCAAAGTTGACCGGTACACGAAGACCAAGAAAAGCACATACACTGGT
TTTGAGCTGTTCCGAATCAAAGAACGGGATATTCCAATTGAGGTTTTGGAGCTTGACAAC
AAGAATGATAAAATTATTGCATTTGCTTGGGAGCCTAAGGGTCACAGATTTGCTGTCATC
CACGGTGACAACCCCAGGCCAGATGTCAGTTTCTACTCTATGCGGTCTGGCACTAACACG
GGCCGTGTTTCAAAGCTAACAACTCTCAAGGGAAAGCAGGCTAATGCTCTCTACTGGTCA
CCTGGAGGCCGCTTCATTATTTTGGCTGGAATGAAAGGTTTCAATGGACAGTTGGAATTC
TTTGACGTCGATGAGCTTGATACCATGGCATCTGCTGAGCATTTTATGGCAACAGATGTC
GAATGGGATCCAACTGGAAGGTATGTAGCGACAGCTGTTACTTCAGTTCATGAGATGGAA
AATGGATTCAACATCTGGTCTTTCAACGGAAAGCTGCTGTATAGGATACTCAAGGATCAT
TTCTTCCAGTTTTTGTGGCGCCCTAGGCCACCATCCTTCTTGAGTAAGGAGAAAGAGGAA
GAGATTGCTAAGAACTTGAAAAAATACAGCAAGAAGTATGAAGCAGAGGATCAAGATGTT
TCATTGCTGTTGAGTGAGCAAGATCGTGAGAAGCGAAAGAAGCTGAAAGAAGAATGGGAA
GCATGGATTAATGAGTGGAAGCAGTTGCATGAAGAGGAGAAAATGGAAAGGGAAAGGTTG
CGTGATGGGGAAGCCAGTGATGAAGAGGAGGAATACCAGGCAAAGGAAGTTGAAGTAGAG
GAAATACTAAAAGTTGAAGAGGAGGTTATTCCTTTTGAAGAGAGCCAACAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400003002
PEP Infomation

pacid=37438814 transcript=PGSC0003DMT400004200 locus=PGSC0003DMG400001674 ID=PGSC0003DMT400004200.v4.03 annot-version=v4.03
Sequence

MSEVVSMEEIRAISDRLGVDLTQIDLDSIHLPPGDDLGIPSDDEDLLEEDALEEDQGFGN
ILVVDNLPVVPKEKYEKLEGVVRKIYSQLGVIKEGGLYMPIDPETQKTLGYCFIEYNTPQ
EAELSKEKTHGYKLDRSHIFAVNMFEDIEKFLKVPDEWAPPEIKPYVPGEMLLKWLTDEK
ARDQYVIRSGGDTEVLWNDARQMKPELVYKRPYWTESFVQWSPMGTYLATVHRQGAAIWG
GATTFNRLMRYAHPQVKLIDFSPGERYLVTYSSHEPSNPRDTHRVVLNIFDVRTGKVMRD
FKGSADEFAVGGTGGVTGVSWPVFRWSGGKEDKYFARIGKNVISVYETETFSLIDKKSIK
VENVMDFSWSPTDPILSLFVPECGNQPARVSLVQIPSKEELRQKNLFSVSDCKMYWQSNG
DYLAVKVDRYTKTKKSTYTGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVI
HGDNPRPDVSFYSMRSGTNTGRVSKLTTLKGKQANALYWSPGGRFIILAGMKGFNGQLEF
FDVDELDTMASAEHFMATDVEWDPTGRYVATAVTSVHEMENGFNIWSFNGKLLYRILKDH
FFQFLWRPRPPSFLSKEKEEEIAKNLKKYSKKYEAEDQDVSLLLSEQDREKRKKLKEEWE
AWINEWKQLHEEEKMERERLRDGEASDEEEEYQAKEVEVEEILKVEEEVIPFEESQQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400004200
Transcript Infomation

pacid=37438814 locus=PGSC0003DMG400001674 ID=PGSC0003DMT400004200.v4.03 annot-version=v4.03
Sequence

ATGTCGGAAGTGGTTTCTATGGAAGAAATCAGAGCTATATCTGATAGGCTTGGTGTGGAT
CTTACACAAATCGATCTGGACTCTATTCATCTTCCCCCTGGTGATGATTTGGGGATACCC
AGTGACGATGAAGACTTGTTGGAGGAGGACGCCTTGGAGGAGGATCAAGGTTTTGGAAAC
ATACTGGTGGTGGACAATCTTCCAGTTGTGCCTAAAGAGAAATATGAGAAATTGGAAGGA
GTAGTTCGGAAAATTTACAGCCAACTTGGTGTTATTAAGGAGGGTGGTCTCTATATGCCT
ATTGATCCTGAGACTCAGAAAACACTTGGGTACTGCTTTATAGAGTATAATACTCCTCAG
GAAGCTGAGCTGAGTAAGGAGAAGACACATGGATACAAGTTAGATAGGTCACATATATTT
GCTGTTAACATGTTTGAAGACATTGAGAAGTTCCTGAAAGTTCCAGATGAGTGGGCTCCG
CCAGAGATCAAGCCTTATGTTCCAGGGGAGATGCTTCTAAAGTGGCTTACTGATGAGAAA
GCTAGAGATCAGTACGTGATTCGGTCTGGCGGTGACACGGAGGTCCTCTGGAATGATGCA
AGACAAATGAAGCCTGAGCTTGTTTATAAACGTCCTTATTGGACTGAGAGTTTTGTTCAA
TGGTCCCCTATGGGAACTTACTTGGCAACAGTTCACAGACAAGGCGCTGCAATTTGGGGT
GGTGCCACCACTTTCAACCGCCTCATGCGTTATGCACATCCTCAGGTAAAGCTGATTGAT
TTCTCCCCCGGTGAGAGATATCTGGTGACATACAGCAGCCATGAACCAAGTAACCCTCGT
GACACCCACAGGGTTGTGCTAAATATTTTTGATGTGAGAACTGGAAAAGTGATGAGAGAT
TTTAAGGGAAGTGCTGATGAATTTGCAGTTGGAGGAACTGGAGGTGTTACTGGTGTGTCC
TGGCCAGTCTTTAGGTGGAGTGGTGGTAAAGAGGATAAGTATTTTGCAAGAATAGGAAAG
AATGTCATCTCTGTTTATGAAACAGAGACTTTCTCACTTATTGACAAGAAATCTATCAAG
GTTGAAAATGTTATGGATTTTAGCTGGTCACCAACAGATCCAATTCTTTCACTCTTTGTT
CCTGAATGCGGAAATCAACCTGCCAGGGTAAGTCTTGTGCAAATCCCAAGTAAAGAGGAG
TTGAGGCAAAAGAATCTCTTCAGTGTAAGTGATTGCAAAATGTATTGGCAAAGCAATGGA
GACTACCTTGCTGTCAAAGTTGACCGGTACACGAAGACCAAGAAAAGCACATACACTGGT
TTTGAGCTGTTCCGAATCAAAGAACGGGATATTCCAATTGAGGTTTTGGAGCTTGACAAC
AAGAATGATAAAATTATTGCATTTGCTTGGGAGCCTAAGGGTCACAGATTTGCTGTCATC
CACGGTGACAACCCCAGGCCAGATGTCAGTTTCTACTCTATGCGGTCTGGCACTAACACG
GGCCGTGTTTCAAAGCTAACAACTCTCAAGGGAAAGCAGGCTAATGCTCTCTACTGGTCA
CCTGGAGGCCGCTTCATTATTTTGGCTGGAATGAAAGGTTTCAATGGACAGTTGGAATTC
TTTGACGTCGATGAGCTTGATACCATGGCATCTGCTGAGCATTTTATGGCAACAGATGTC
GAATGGGATCCAACTGGAAGGTATGTAGCGACAGCTGTTACTTCAGTTCATGAGATGGAA
AATGGATTCAACATCTGGTCTTTCAACGGAAAGCTGCTGTATAGGATACTCAAGGATCAT
TTCTTCCAGTTTTTGTGGCGCCCTAGGCCACCATCCTTCTTGAGTAAGGAGAAAGAGGAA
GAGATTGCTAAGAACTTGAAAAAATACAGCAAGAAGTATGAAGCAGAGGATCAAGATGTT
TCATTGCTGTTGAGTGAGCAAGATCGTGAGAAGCGAAAGAAGCTGAAAGAAGAATGGGAA
GCATGGATTAATGAGTGGAAGCAGTTGCATGAAGAGGAGAAAATGGAAAGGGAAAGGTTG
CGTGATGGGGAAGCCAGTGATGAAGAGGAGGAATACCAGGCAAAGGAAGTTGAAGTAGAG
GAAATACTAAAAGTTGAAGAGGAGGTTATTCCTTTTGAAGAGAGCCAACAGTGA