Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400004176
CDS Infomation

pacid=37437490 polypeptide=PGSC0003DMP400002984 locus=PGSC0003DMG400001658 ID=PGSC0003DMT400004176.v4.03 annot-version=v4.03
Sequence

ATGGAAACCGAAACCCTAATGGACGAGTTGCCGGCGGCAACCGCAACAGCGGTAGAGCAT
CCGGAAACTCCACTGCAACCCCCTTCATCGAACGCCGACGACGGTGGAGTGAGTCAAGAA
TTTAGAACCCCAGAAGAGTTGGTTGCTAAATCCATAGCTCCTGTAAAGAGAGAGTATCTT
CGCCCTCCCCCTTCTAGACCTTCTACCAATAACAACAACAACGCTATTGTCGGAGTGGAA
AATGATGATGCAGCTGAGGCCAAAGGAGCTCCTCTTCTTAAGGACAAAAAATCCAAACGC
CAAATTAAGCGTGAACGCCGCGAGGAACAAAAATCTCCATTGCATCTCTGTCCTAAGGTG
GCCAAATCAGGAAAAGTTAGTGCGTGTCCATATGGTGATAAATGTCGGTTTAGTCATGAT
GTGGAAGCTTTTAAAGCTGTGAAACCAGCTGATATAGAGGGTAGCTGCCCGTTTCTGGTT
TATGAAGGGCCATGTTCTTATGGATTGGCTTGTAGGTTTGCAGGGACTCACAGAGACGAT
GTTTCAGCTCCAACTGAGAATTTGCCTGGGAAGAGTTCTGAACTAAATTTTTTCAGTAAG
GACACTCAGAAACTTCTGTGGAAAAATAAAATGAAGTTTCCCAAGGCTGAAGCCACTCTC
AAACTTCTTGGACTTGAGGGCAATCCTAAAGATAAAACATTGGCTGATAATGGGGAAAAT
GGCCAAGTCGCACCAAAAGAGCCTGCTACGGACACCAAAACAGACAGCAATGTAGTTGCT
AATGATAGTATCAGTCCTTCCATTTCACCAGAAGATAATGTAAATGGAAATAATTTGGCT
GATGATGCTAGACCTTTAAAGAAGGCAAAGTCATCTGTCAATGAAATTTGTTCCTCCCAA
GTTAGCAGTGGTTTAAGTGTTCAAGGGGGAGTTCCAGACGGCAACTTTGGTGTGAATAAA
TCAGAGCCAACTGCTGATACAATGACAGATTCTGATAAAAGCCTTAAATTGCACCCCCGT
GAAAAAAAGCTTATTGATTTTCGAGACAAGCTCTATCTTGCTCCTTTGACCACAGTTGGG
AATCTGCCTTTTCGTAGAGTTTGCAAGGTGCTAGGAGCTGATGTAACATGTGGAGAGATG
GCAATGTGCACAAATCTCTTGCAGGGTCAAGCAGCTGAGTGGGCACTGCTGAGACGGCAT
TCATCCGAAAATTTGTTTGGTGTTCAGATTTGTGGGGCATATCCAGACACTGTTACAAAG
ACAGTTGAGCTTATAGAACAAGAATGCTCTGTGGATTTCATTGATATTAACATGGGATGC
CCAATTGATGTTGTAGTTAACAAGGGTGGTGGATCAGCTCTTCTTACAAAACCAATGCGG
ATGAAGAGTGTAGTAGAAGCCGCTTCTTCAACAGTTGGTACACCAGTAACTATCAAGGTA
CGAACTGCTTATTTTGAGGGGAAAAATCGCATTGATTCTCTAATTGCAGATATGGGTAGT
TGGGGTGCAACTGCAGTAACCATACATGGCCGATCACGTCAACAGCGCTACAGTAAGCCT
GCTGACTGGGATTACGTGTATCAATGCGTGCGAAAGGCCCCCAAGTCATTACAGGTCCTT
GGAAATGGTGATGTATTTTCTTACGTAGACTGGAACAACCACAAAACTGAGTGTCCTGAA
CTTTCTACATGTATGATTGCTCGAGGTGCATTAGTAAAGCCTTGGATATTTACTGAAATC
AAGGAACAGAGGCACTGGGACATTACATCTGGCGAGCGGCTAGATATCTTGAAGGATTAT
GCACGGTTTGGCCTTCAACACTGGGGTTCTGATTCGAAAGGAGTAGAAACAACCAGACAC
TTTTTGTTGGAGTGGCTTGGCTACACATGTCGGTACGTTCCAGTTGGCCTGTTAGATATT
ATCCCACAAAAAATAAATTGGCGATCACCCTCATACTACGGCAGGGATGACCTAGAGACA
CTAATGGCCTCTGATTCTGCTGCTGACTGGGTAAGGATCTCCGAGCTGGTACTCGGGAAG
GTTCCTTCTGGCTATTCGTTTGCACCAAAACACAAGTCCAATGCTTATGACAGAGCAGAG
AACGGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400002984
PEP Infomation

pacid=37437490 transcript=PGSC0003DMT400004176 locus=PGSC0003DMG400001658 ID=PGSC0003DMT400004176.v4.03 annot-version=v4.03
Sequence

METETLMDELPAATATAVEHPETPLQPPSSNADDGGVSQEFRTPEELVAKSIAPVKREYL
RPPPSRPSTNNNNNAIVGVENDDAAEAKGAPLLKDKKSKRQIKRERREEQKSPLHLCPKV
AKSGKVSACPYGDKCRFSHDVEAFKAVKPADIEGSCPFLVYEGPCSYGLACRFAGTHRDD
VSAPTENLPGKSSELNFFSKDTQKLLWKNKMKFPKAEATLKLLGLEGNPKDKTLADNGEN
GQVAPKEPATDTKTDSNVVANDSISPSISPEDNVNGNNLADDARPLKKAKSSVNEICSSQ
VSSGLSVQGGVPDGNFGVNKSEPTADTMTDSDKSLKLHPREKKLIDFRDKLYLAPLTTVG
NLPFRRVCKVLGADVTCGEMAMCTNLLQGQAAEWALLRRHSSENLFGVQICGAYPDTVTK
TVELIEQECSVDFIDINMGCPIDVVVNKGGGSALLTKPMRMKSVVEAASSTVGTPVTIKV
RTAYFEGKNRIDSLIADMGSWGATAVTIHGRSRQQRYSKPADWDYVYQCVRKAPKSLQVL
GNGDVFSYVDWNNHKTECPELSTCMIARGALVKPWIFTEIKEQRHWDITSGERLDILKDY
ARFGLQHWGSDSKGVETTRHFLLEWLGYTCRYVPVGLLDIIPQKINWRSPSYYGRDDLET
LMASDSAADWVRISELVLGKVPSGYSFAPKHKSNAYDRAENG*

Transcript Sequence

Transcript ID

PGSC0003DMT400004176
Transcript Infomation

pacid=37437490 locus=PGSC0003DMG400001658 ID=PGSC0003DMT400004176.v4.03 annot-version=v4.03
Sequence

ATGGAAACCGAAACCCTAATGGACGAGTTGCCGGCGGCAACCGCAACAGCGGTAGAGCAT
CCGGAAACTCCACTGCAACCCCCTTCATCGAACGCCGACGACGGTGGAGTGAGTCAAGAA
TTTAGAACCCCAGAAGAGTTGGTTGCTAAATCCATAGCTCCTGTAAAGAGAGAGTATCTT
CGCCCTCCCCCTTCTAGACCTTCTACCAATAACAACAACAACGCTATTGTCGGAGTGGAA
AATGATGATGCAGCTGAGGCCAAAGGAGCTCCTCTTCTTAAGGACAAAAAATCCAAACGC
CAAATTAAGCGTGAACGCCGCGAGGAACAAAAATCTCCATTGCATCTCTGTCCTAAGGTG
GCCAAATCAGGAAAAGTTAGTGCGTGTCCATATGGTGATAAATGTCGGTTTAGTCATGAT
GTGGAAGCTTTTAAAGCTGTGAAACCAGCTGATATAGAGGGTAGCTGCCCGTTTCTGGTT
TATGAAGGGCCATGTTCTTATGGATTGGCTTGTAGGTTTGCAGGGACTCACAGAGACGAT
GTTTCAGCTCCAACTGAGAATTTGCCTGGGAAGAGTTCTGAACTAAATTTTTTCAGTAAG
GACACTCAGAAACTTCTGTGGAAAAATAAAATGAAGTTTCCCAAGGCTGAAGCCACTCTC
AAACTTCTTGGACTTGAGGGCAATCCTAAAGATAAAACATTGGCTGATAATGGGGAAAAT
GGCCAAGTCGCACCAAAAGAGCCTGCTACGGACACCAAAACAGACAGCAATGTAGTTGCT
AATGATAGTATCAGTCCTTCCATTTCACCAGAAGATAATGTAAATGGAAATAATTTGGCT
GATGATGCTAGACCTTTAAAGAAGGCAAAGTCATCTGTCAATGAAATTTGTTCCTCCCAA
GTTAGCAGTGGTTTAAGTGTTCAAGGGGGAGTTCCAGACGGCAACTTTGGTGTGAATAAA
TCAGAGCCAACTGCTGATACAATGACAGATTCTGATAAAAGCCTTAAATTGCACCCCCGT
GAAAAAAAGCTTATTGATTTTCGAGACAAGCTCTATCTTGCTCCTTTGACCACAGTTGGG
AATCTGCCTTTTCGTAGAGTTTGCAAGGTGCTAGGAGCTGATGTAACATGTGGAGAGATG
GCAATGTGCACAAATCTCTTGCAGGGTCAAGCAGCTGAGTGGGCACTGCTGAGACGGCAT
TCATCCGAAAATTTGTTTGGTGTTCAGATTTGTGGGGCATATCCAGACACTGTTACAAAG
ACAGTTGAGCTTATAGAACAAGAATGCTCTGTGGATTTCATTGATATTAACATGGGATGC
CCAATTGATGTTGTAGTTAACAAGGGTGGTGGATCAGCTCTTCTTACAAAACCAATGCGG
ATGAAGAGTGTAGTAGAAGCCGCTTCTTCAACAGTTGGTACACCAGTAACTATCAAGGTA
CGAACTGCTTATTTTGAGGGGAAAAATCGCATTGATTCTCTAATTGCAGATATGGGTAGT
TGGGGTGCAACTGCAGTAACCATACATGGCCGATCACGTCAACAGCGCTACAGTAAGCCT
GCTGACTGGGATTACGTGTATCAATGCGTGCGAAAGGCCCCCAAGTCATTACAGGTCCTT
GGAAATGGTGATGTATTTTCTTACGTAGACTGGAACAACCACAAAACTGAGTGTCCTGAA
CTTTCTACATGTATGATTGCTCGAGGTGCATTAGTAAAGCCTTGGATATTTACTGAAATC
AAGGAACAGAGGCACTGGGACATTACATCTGGCGAGCGGCTAGATATCTTGAAGGATTAT
GCACGGTTTGGCCTTCAACACTGGGGTTCTGATTCGAAAGGAGTAGAAACAACCAGACAC
TTTTTGTTGGAGTGGCTTGGCTACACATGTCGGTACGTTCCAGTTGGCCTGTTAGATATT
ATCCCACAAAAAATAAATTGGCGATCACCCTCATACTACGGCAGGGATGACCTAGAGACA
CTAATGGCCTCTGATTCTGCTGCTGACTGGGTAAGGATCTCCGAGCTGGTACTCGGGAAG
GTTCCTTCTGGCTATTCGTTTGCACCAAAACACAAGTCCAATGCTTATGACAGAGCAGAG
AACGGCTAA