Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400004156
CDS Infomation

pacid=37441126 polypeptide=PGSC0003DMP400002973 locus=PGSC0003DMG400001646 ID=PGSC0003DMT400004156.v4.03 annot-version=v4.03
Sequence

ATGGCCAAAAAGAAGATGACCCCGCAAGATAATCAACCCCAAAACCCCACTGAAGTGGTT
AAGGAAAATCAGGTGAAAGAAAACAATCATTCCATTGCCATGGAAGAAGCTTCTGAGAAA
CTTGAGAATCTCAAGAACCTCAACAATATGCTTCTCAAGGAGACTATTGAGAAACGGCAA
CAGGTGGATTCACTAGTGCAGGCAAAAGGGTGTCTGGAATCGGAACTCAAAAGGTCTAAC
TCGGAGAAAAGCGAGTTGCAGACCGAGTTGACTCAGTTGAGTGAACAGGTTATTCAGCTG
GAGATTGAGAAGAAATTGGTGTCTGTGTTTGTTGCTGTGCAGGTTGGTTACCATGCTGAG
GTGATTGAGAATGAGAGGAATGGGTTTCGTGAACAGAATGACGCTGTTGAGAAGAAGCTG
AAGAGTGTAGAGATAGAAATGCGTGATGTTTTGAGAGAGCAGAGTGAGATTGAGAAGCTG
TTGACTGGAAAGGAGAGTGAGATCGAAAGCCTTAGGAAGAAATTGAATGCTGTTGCTGAT
GAGGTTGCCCACGAGAGGAATGTTTCGGAGGGGATTCGCAAGGAGAAGGATGAAATGAAA
ATGAAACTTGACGCCCAAATAGAGGAAGCAGATGGATTGAGAGTGAGATTGGTTGAAACT
GAGAAGCGAGAGAAGGAGATTGAAGGAGAAGTTGGGAAAATAAGGGTTGAATACAATGCT
CTCACGGAGAAAATCAAGGACAGAGAAAGCAAGATCCAATCCATGGTGAGAGAGAAGGAA
TTGGTTGCAAATAGCCTGTTGAGTTCGAATAAAGTGATTGAAGAACTAAGGGGCCAGATT
GATGGGATTGTTAGGGAAAAAGAAGGGATTGAAGTGGAGAGAAATGCAGAAGTGACAAAG
AATGGTGAGTTGCAAAACACAGTCGCTGGTCTTAACGATATGGTGCTGAGTTTGCAAAAG
GAGGAGGCTAAATTGCGTGAAAATTTGGCTGGGTTAGAGAAGAAGTGTTTGGAAGGCTTA
AGAAAGGAAGAGGAGATGGAGAAGAGGATAAATGAACTTGTGAAGGGAAACAATGAGAAA
GAGATCAGAGTTGAAAACTTGATTGAAGAAAAGGCCTTTGTTGAGAAGGAACTAGACAAG
GCATTGAAGCAATTAGATGTAGAGAAGAAGAAGATTGAGCAAACGGTTACAGAGAAGAAT
GAGATGGAAGAGGCTAAAGTTGGAAGGGAGACTGAAATTGTTGAACTGCAGAAACAATTA
GCTGAATTCAAGAATTCTATTTCTGAATTAGAGGTGTCTTGCAATGGTCAAAAAGAGAAG
GTGAAGAATTTGGAATCTGAAGTTGGTAAGTATAAGGCTGCCTTCGAGCGAGTTACCCTT
GAGAAGGATGAGATGCAAAAGCATTTTGTTGACGAGGAACAGAATGGTATAAACATGAAG
AAACAGATTGAAGAAATGGAGAATCACATTCAAAAAATTGTGAAGGAGGTTGAGCAAACC
AAGGCTGATTACCTCAATGTTGTTAGAGAAAAGAAAGAGTTGGAAACTCAATGTCAAGTG
TTGAACAAGGAAATTGCTTTTGCGCAAACCTCACTTGGCGAAGCACAGAAGAAAATTAGT
GATATGCAGTGCAAGGTTGAGTTGGCAAATAGCAATTCTGAGGAAATCTTGAATGCTTTG
AGGACTGCTGCAGATTCAATCCGCTCGGATGGTGAAGGAGAAAGTGGCAGTGTGGTTGAT
GAAAAACAAATGAATGGGGAAGATGTCAAGCCTTATGAAGCAGAGTTGGAGGCCATCACA
AATGCAATCAAGAGTAAAGAGAACAAAGTTGAGGAGATGCAGAGGCAGGTTGAGTTTTTG
CAGTTTTCAGTAGCTCAAGCACAAAAAAAGAAGAATTTCTGGACCATGTTATCTTCAGCA
ACAACACTTTTTGCTGCAATTTCTCTTGCCTATGTTGCTCGTGGCCATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400002973
PEP Infomation

pacid=37441126 transcript=PGSC0003DMT400004156 locus=PGSC0003DMG400001646 ID=PGSC0003DMT400004156.v4.03 annot-version=v4.03
Sequence

MAKKKMTPQDNQPQNPTEVVKENQVKENNHSIAMEEASEKLENLKNLNNMLLKETIEKRQ
QVDSLVQAKGCLESELKRSNSEKSELQTELTQLSEQVIQLEIEKKLVSVFVAVQVGYHAE
VIENERNGFREQNDAVEKKLKSVEIEMRDVLREQSEIEKLLTGKESEIESLRKKLNAVAD
EVAHERNVSEGIRKEKDEMKMKLDAQIEEADGLRVRLVETEKREKEIEGEVGKIRVEYNA
LTEKIKDRESKIQSMVREKELVANSLLSSNKVIEELRGQIDGIVREKEGIEVERNAEVTK
NGELQNTVAGLNDMVLSLQKEEAKLRENLAGLEKKCLEGLRKEEEMEKRINELVKGNNEK
EIRVENLIEEKAFVEKELDKALKQLDVEKKKIEQTVTEKNEMEEAKVGRETEIVELQKQL
AEFKNSISELEVSCNGQKEKVKNLESEVGKYKAAFERVTLEKDEMQKHFVDEEQNGINMK
KQIEEMENHIQKIVKEVEQTKADYLNVVREKKELETQCQVLNKEIAFAQTSLGEAQKKIS
DMQCKVELANSNSEEILNALRTAADSIRSDGEGESGSVVDEKQMNGEDVKPYEAELEAIT
NAIKSKENKVEEMQRQVEFLQFSVAQAQKKKNFWTMLSSATTLFAAISLAYVARGH*

Transcript Sequence

Transcript ID

PGSC0003DMT400004156
Transcript Infomation

pacid=37441126 locus=PGSC0003DMG400001646 ID=PGSC0003DMT400004156.v4.03 annot-version=v4.03
Sequence

ATGGCCAAAAAGAAGATGACCCCGCAAGATAATCAACCCCAAAACCCCACTGAAGTGGTT
AAGGAAAATCAGGTGAAAGAAAACAATCATTCCATTGCCATGGAAGAAGCTTCTGAGAAA
CTTGAGAATCTCAAGAACCTCAACAATATGCTTCTCAAGGAGACTATTGAGAAACGGCAA
CAGGTGGATTCACTAGTGCAGGCAAAAGGGTGTCTGGAATCGGAACTCAAAAGGTCTAAC
TCGGAGAAAAGCGAGTTGCAGACCGAGTTGACTCAGTTGAGTGAACAGGTTATTCAGCTG
GAGATTGAGAAGAAATTGGTGTCTGTGTTTGTTGCTGTGCAGGTTGGTTACCATGCTGAG
GTGATTGAGAATGAGAGGAATGGGTTTCGTGAACAGAATGACGCTGTTGAGAAGAAGCTG
AAGAGTGTAGAGATAGAAATGCGTGATGTTTTGAGAGAGCAGAGTGAGATTGAGAAGCTG
TTGACTGGAAAGGAGAGTGAGATCGAAAGCCTTAGGAAGAAATTGAATGCTGTTGCTGAT
GAGGTTGCCCACGAGAGGAATGTTTCGGAGGGGATTCGCAAGGAGAAGGATGAAATGAAA
ATGAAACTTGACGCCCAAATAGAGGAAGCAGATGGATTGAGAGTGAGATTGGTTGAAACT
GAGAAGCGAGAGAAGGAGATTGAAGGAGAAGTTGGGAAAATAAGGGTTGAATACAATGCT
CTCACGGAGAAAATCAAGGACAGAGAAAGCAAGATCCAATCCATGGTGAGAGAGAAGGAA
TTGGTTGCAAATAGCCTGTTGAGTTCGAATAAAGTGATTGAAGAACTAAGGGGCCAGATT
GATGGGATTGTTAGGGAAAAAGAAGGGATTGAAGTGGAGAGAAATGCAGAAGTGACAAAG
AATGGTGAGTTGCAAAACACAGTCGCTGGTCTTAACGATATGGTGCTGAGTTTGCAAAAG
GAGGAGGCTAAATTGCGTGAAAATTTGGCTGGGTTAGAGAAGAAGTGTTTGGAAGGCTTA
AGAAAGGAAGAGGAGATGGAGAAGAGGATAAATGAACTTGTGAAGGGAAACAATGAGAAA
GAGATCAGAGTTGAAAACTTGATTGAAGAAAAGGCCTTTGTTGAGAAGGAACTAGACAAG
GCATTGAAGCAATTAGATGTAGAGAAGAAGAAGATTGAGCAAACGGTTACAGAGAAGAAT
GAGATGGAAGAGGCTAAAGTTGGAAGGGAGACTGAAATTGTTGAACTGCAGAAACAATTA
GCTGAATTCAAGAATTCTATTTCTGAATTAGAGGTGTCTTGCAATGGTCAAAAAGAGAAG
GTGAAGAATTTGGAATCTGAAGTTGGTAAGTATAAGGCTGCCTTCGAGCGAGTTACCCTT
GAGAAGGATGAGATGCAAAAGCATTTTGTTGACGAGGAACAGAATGGTATAAACATGAAG
AAACAGATTGAAGAAATGGAGAATCACATTCAAAAAATTGTGAAGGAGGTTGAGCAAACC
AAGGCTGATTACCTCAATGTTGTTAGAGAAAAGAAAGAGTTGGAAACTCAATGTCAAGTG
TTGAACAAGGAAATTGCTTTTGCGCAAACCTCACTTGGCGAAGCACAGAAGAAAATTAGT
GATATGCAGTGCAAGGTTGAGTTGGCAAATAGCAATTCTGAGGAAATCTTGAATGCTTTG
AGGACTGCTGCAGATTCAATCCGCTCGGATGGTGAAGGAGAAAGTGGCAGTGTGGTTGAT
GAAAAACAAATGAATGGGGAAGATGTCAAGCCTTATGAAGCAGAGTTGGAGGCCATCACA
AATGCAATCAAGAGTAAAGAGAACAAAGTTGAGGAGATGCAGAGGCAGGTTGAGTTTTTG
CAGTTTTCAGTAGCTCAAGCACAAAAAAAGAAGAATTTCTGGACCATGTTATCTTCAGCA
ACAACACTTTTTGCTGCAATTTCTCTTGCCTATGTTGCTCGTGGCCATTGA