Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400004113
CDS Infomation

pacid=37439113 polypeptide=PGSC0003DMP400002945 locus=PGSC0003DMG400001625 ID=PGSC0003DMT400004113.v4.03 annot-version=v4.03
Sequence

ATGAATGTTTATTCTTTGTCCGCATTACTTACTCTTACGGCCATATCACTTTTTGGATGG
TCGTATATTGATATTTGCCATGCATTCTCGATTAAAGAAGCTAGCATTACCGATCTGCAC
CTTGCTTTTAGCCAAAACCAGCTTACATCGAGGCAGCTCGTGGAGTTCTACCTCGGAGAA
ATTTCACGGCTTAATCCCGTTCTCAAAAGTGTCATTGAGATAAATCCCGATGCACTCTTG
GAAGCTGACAGGGCTGACAAAGAGAGGAACGAGTCAGCAAGCTCTTTGTCAATGTTGCGT
GGTGTTCCAATCCTTCTTAAGGATAACATTGCAACAAAAGATAAGCTTAACACTACAGCT
GGATCATTTTCATTACTGGGATCAGTGATACCCCGTGACGCGGGTGTAGTGACAAAGCTG
AGAAGAGCTGGTGCGATTGTACTAGGGAAAGCTAGCCTCAGTGAGTGGGCTCACTCTCGA
ACGCTAAAGGCGCCCAATGGCTGGAGCCCTAGAGGTGGACAAGGAAAGAATCCTTACGTT
CTCTCCACGGACCCTTGTGGCTCGAGTAGTGGATCAGCAATATCAGTGGCAGCAAACATG
GTATCTGTGTCAATAGGGACAGAGACCCGTGGTTCAATCTTATGCCCGGCCAGTTCCAAT
GCAGTTGTAGGCATCAAACCAACCGTTGGACTCACTAGTCGAGCAGGGGTCATCCCAGTT
ACACCTAGACAAGACACTGTTGGGCCAATTGGCAGAACAGTAGCAGATGCTGTTCATGTT
CTTGATGCCATCGTAGGCTTTGACCACAATGACGCAGCTGCAACTGCTGCAGCAGCTAAA
TTCATTCCTCGTGGTGGTTATACTCAATTTCTGAAAGTAGATGGCCTTAACAGCAAGCGA
ATTGGAATAGTGAGAGACCCCTTCTTCAATTTCACTAATAATCCTGCCCTCGCTCAAGCT
TTTGAGAAACATCTCCAAACACTAAGGCTACAAGGTGCAGTCTTGGTAGACAATGTGATG
ATAGCCAACCTTGAGACAATTTTAGACTTTAATCTGAGTGGTGAAGCATCAGCAGTATTG
GCTGAATTCAAGATAGCCTTAAATGTTTATCTAAAAGAGCTAATCGATTCCCCTGTTCGA
TCCTTATCAGATATAATAATCTTCAATCAAAAAAATCCCGAACTGGAGATGCTAAAGGAA
TTTGGTCAAGATATATTTTTGGCAGCTGAATCTACAAATGGAATTGGGGAAACAGAATTG
AAAGCTTTGAAGAATTTGTCAAGATTAACAAGAAATGGATTCCAAAAGTTGATGAAAAAG
TATAAGTTGGATGCATTGGTTACTGCTGGCTCTAGTGTTGCTGCAGTTCTTGCAATTGGT
GGATTTCCAGCAATTAGTGTGCCAGCTGCTTATGACAAAGGGGTGCCTATTGGCACTTGT
TTTAGTGGGTTGAAAGGCTCAGAGCCTAAATTAATTGAAATTGCCTATGGCTTTGAGCAA
GCAACTCTAATTAGAAAGCCTCCTACATTTTTGCCCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400002945
PEP Infomation

pacid=37439113 transcript=PGSC0003DMT400004113 locus=PGSC0003DMG400001625 ID=PGSC0003DMT400004113.v4.03 annot-version=v4.03
Sequence

MNVYSLSALLTLTAISLFGWSYIDICHAFSIKEASITDLHLAFSQNQLTSRQLVEFYLGE
ISRLNPVLKSVIEINPDALLEADRADKERNESASSLSMLRGVPILLKDNIATKDKLNTTA
GSFSLLGSVIPRDAGVVTKLRRAGAIVLGKASLSEWAHSRTLKAPNGWSPRGGQGKNPYV
LSTDPCGSSSGSAISVAANMVSVSIGTETRGSILCPASSNAVVGIKPTVGLTSRAGVIPV
TPRQDTVGPIGRTVADAVHVLDAIVGFDHNDAAATAAAAKFIPRGGYTQFLKVDGLNSKR
IGIVRDPFFNFTNNPALAQAFEKHLQTLRLQGAVLVDNVMIANLETILDFNLSGEASAVL
AEFKIALNVYLKELIDSPVRSLSDIIIFNQKNPELEMLKEFGQDIFLAAESTNGIGETEL
KALKNLSRLTRNGFQKLMKKYKLDALVTAGSSVAAVLAIGGFPAISVPAAYDKGVPIGTC
FSGLKGSEPKLIEIAYGFEQATLIRKPPTFLP*

Transcript Sequence

Transcript ID

PGSC0003DMT400004113
Transcript Infomation

pacid=37439113 locus=PGSC0003DMG400001625 ID=PGSC0003DMT400004113.v4.03 annot-version=v4.03
Sequence

ATGAATGTTTATTCTTTGTCCGCATTACTTACTCTTACGGCCATATCACTTTTTGGATGG
TCGTATATTGATATTTGCCATGCATTCTCGATTAAAGAAGCTAGCATTACCGATCTGCAC
CTTGCTTTTAGCCAAAACCAGCTTACATCGAGGCAGCTCGTGGAGTTCTACCTCGGAGAA
ATTTCACGGCTTAATCCCGTTCTCAAAAGTGTCATTGAGATAAATCCCGATGCACTCTTG
GAAGCTGACAGGGCTGACAAAGAGAGGAACGAGTCAGCAAGCTCTTTGTCAATGTTGCGT
GGTGTTCCAATCCTTCTTAAGGATAACATTGCAACAAAAGATAAGCTTAACACTACAGCT
GGATCATTTTCATTACTGGGATCAGTGATACCCCGTGACGCGGGTGTAGTGACAAAGCTG
AGAAGAGCTGGTGCGATTGTACTAGGGAAAGCTAGCCTCAGTGAGTGGGCTCACTCTCGA
ACGCTAAAGGCGCCCAATGGCTGGAGCCCTAGAGGTGGACAAGGAAAGAATCCTTACGTT
CTCTCCACGGACCCTTGTGGCTCGAGTAGTGGATCAGCAATATCAGTGGCAGCAAACATG
GTATCTGTGTCAATAGGGACAGAGACCCGTGGTTCAATCTTATGCCCGGCCAGTTCCAAT
GCAGTTGTAGGCATCAAACCAACCGTTGGACTCACTAGTCGAGCAGGGGTCATCCCAGTT
ACACCTAGACAAGACACTGTTGGGCCAATTGGCAGAACAGTAGCAGATGCTGTTCATGTT
CTTGATGCCATCGTAGGCTTTGACCACAATGACGCAGCTGCAACTGCTGCAGCAGCTAAA
TTCATTCCTCGTGGTGGTTATACTCAATTTCTGAAAGTAGATGGCCTTAACAGCAAGCGA
ATTGGAATAGTGAGAGACCCCTTCTTCAATTTCACTAATAATCCTGCCCTCGCTCAAGCT
TTTGAGAAACATCTCCAAACACTAAGGCTACAAGGTGCAGTCTTGGTAGACAATGTGATG
ATAGCCAACCTTGAGACAATTTTAGACTTTAATCTGAGTGGTGAAGCATCAGCAGTATTG
GCTGAATTCAAGATAGCCTTAAATGTTTATCTAAAAGAGCTAATCGATTCCCCTGTTCGA
TCCTTATCAGATATAATAATCTTCAATCAAAAAAATCCCGAACTGGAGATGCTAAAGGAA
TTTGGTCAAGATATATTTTTGGCAGCTGAATCTACAAATGGAATTGGGGAAACAGAATTG
AAAGCTTTGAAGAATTTGTCAAGATTAACAAGAAATGGATTCCAAAAGTTGATGAAAAAG
TATAAGTTGGATGCATTGGTTACTGCTGGCTCTAGTGTTGCTGCAGTTCTTGCAATTGGT
GGATTTCCAGCAATTAGTGTGCCAGCTGCTTATGACAAAGGGGTGCCTATTGGCACTTGT
TTTAGTGGGTTGAAAGGCTCAGAGCCTAAATTAATTGAAATTGCCTATGGCTTTGAGCAA
GCAACTCTAATTAGAAAGCCTCCTACATTTTTGCCCTAA