Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400004104
CDS Infomation

pacid=37436091 polypeptide=PGSC0003DMP400002939 locus=PGSC0003DMG400001620 ID=PGSC0003DMT400004104.v4.03 annot-version=v4.03
Sequence

ATGGCGGACATAGTGAAACAAATTCTAGCACGGCCAATACAATTGGCAGACCAGGTAACA
AAAGCGGCTGATGAAGTTTGTAATTTTAAGGCAGATTGTCTTGAAATTAAAGCCAAAACA
GAGAGGCTCGCCGCGCTGCTAAGACAGGCAGCGCGGGCGAGCAATGACTTGTACGAGCGT
CCAACGCGTCGAATTATTGATGACACGGAACAAGTCTTGGACAAGGCACTTACTCTTGTA
TTCAAATGTTGTGCCAGGGGATTGAGTCGGGTTTTCACGATTATCCCAAATGCTGCATTG
AAGAAAACGTCACAACAGCTTGAGAATTCATGTGGTGATGTTCAATGGCTGTTACGTGTG
TCGACTCCAGCGGATGATCGTGATGATGAGTATCTCGGGCTTCCTCCAATTGCAGCTAAT
GAACCGATTTTGTGTCTGATATGGGAACAGATTGCAATTTTGTGTACAGGGTCGTTAGAA
GATCGTTCTGATGCAGCGGCTTCGCTTGTATCATTGGCTAGGGACAATGAGCGTTACGGG
AAGTTGATTATAGAAGAAGGTGGGGTTGCACCATTGTTGAAATTGGCTAAAGAAGGACGA
ATGGAAGGTCAGGAGAACGCGTCAAGGGCTATTGGTCTTCTTGGTCGAGACCCTGAAAGT
GTTGAACAAATTGTGAATGCTGGTGTTTGTTCTGTGTTTGCGAAGATTCTAAAAGATGGG
CATATGAAAATTCAGGTTGTAGTGGCTTGGGCAATTTCAGAATTGGCTGCAAATCATCAC
AAATGTCAAGATCATTTTGCTCAAGCAAATACTATTAGGCTATTGGTTAGTCATCTTGCT
TTCGAAACAATTCAAGAACATAGTAAGTATGCTATTGCTACCAAACAACAGAACATGTCG
ATACACGCTGCTGCCATGGCACATTCTAATTCTTCTGGTACTAGCAAATTCAGTGACACT
GGAGGTAAACTTGAAGATGATGACAATAGAACTCATAGTAAAATTCTTCATCCTATGGAT
AATCAAACAACCAACCAAATGCATAGTTTGGTTACGAGCGCAATGGCCTTGAAATCCCAG
GCACAGAATGAGCCCAACAATCCTATATCAAGTCCAAATCAACAGCAGCAGCAGCGACAA
AACCCGAATCAGCAGAGGAGCCACCATGTTGGACTGACAGGGACTAGCATTAAAGGGAGG
GAATATGAAGATCCTGCTACAAAAGCTGAAATGAAAGCAATGGCTGCCAGAGCACTTAGG
CATCTGTGTGCAGGAAATGTTAGCATTTGTACTCATATTACAGAATCCCGAGCTCTTTTA
TGCTTTGCCGTTTTGCTAGAGAAAGGCCCTGATGAAGTACAATATCATTCAGCCATGGCA
CTTATGGAGATCACAGGAGTTGCTGAGCTAAATTCAGACTTGAGACGTGCAGCTTTCAAG
CCGACTGCACCTGCTGCCAAAGCTGTGCTTGATCAATTTTTGAGAATTATAAACCTGGAA
GATTCAGAATTGCTCATTCCAAGCATCAGATCTATAGGCCATCTGGCCAGGACCTTTCGA
GCAACGGAAACCAGACTCATTGGTCCATTGGTGGTTCTGTTAGATGATAGGGAACCAGAA
GTAACTAGGGAAGCTGCAATTGCACTGAACAAATTTGCTTCCTCTGATAATTTCCTAAGA
GTCGATCACTGCAAGGCCATAATACAGGCAGGAGGTACCAAGCACCTAGTTCCACATGTT
TACTTTGGTGAACAAATGGTTCAGGTTCCTTGTTTGATTCTCTTGAGTTACATTGCAACA
CATGTTCCTGATAGTGAGGCATTAGCTGATGACAATGCACATATAGTGTTGGAGTGGGCT
ACAAAGCAGGGACACCTAATGCAAGATCCTACAGTTGAAGAACTAGTGAACCAAGGCAGA
GAAAGCATGGAACTTTATCAGTCCAGAGGCTCACGCCTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400002939
PEP Infomation

pacid=37436091 transcript=PGSC0003DMT400004104 locus=PGSC0003DMG400001620 ID=PGSC0003DMT400004104.v4.03 annot-version=v4.03
Sequence

MADIVKQILARPIQLADQVTKAADEVCNFKADCLEIKAKTERLAALLRQAARASNDLYER
PTRRIIDDTEQVLDKALTLVFKCCARGLSRVFTIIPNAALKKTSQQLENSCGDVQWLLRV
STPADDRDDEYLGLPPIAANEPILCLIWEQIAILCTGSLEDRSDAAASLVSLARDNERYG
KLIIEEGGVAPLLKLAKEGRMEGQENASRAIGLLGRDPESVEQIVNAGVCSVFAKILKDG
HMKIQVVVAWAISELAANHHKCQDHFAQANTIRLLVSHLAFETIQEHSKYAIATKQQNMS
IHAAAMAHSNSSGTSKFSDTGGKLEDDDNRTHSKILHPMDNQTTNQMHSLVTSAMALKSQ
AQNEPNNPISSPNQQQQQRQNPNQQRSHHVGLTGTSIKGREYEDPATKAEMKAMAARALR
HLCAGNVSICTHITESRALLCFAVLLEKGPDEVQYHSAMALMEITGVAELNSDLRRAAFK
PTAPAAKAVLDQFLRIINLEDSELLIPSIRSIGHLARTFRATETRLIGPLVVLLDDREPE
VTREAAIALNKFASSDNFLRVDHCKAIIQAGGTKHLVPHVYFGEQMVQVPCLILLSYIAT
HVPDSEALADDNAHIVLEWATKQGHLMQDPTVEELVNQGRESMELYQSRGSRL*

Transcript Sequence

Transcript ID

PGSC0003DMT400004104
Transcript Infomation

pacid=37436091 locus=PGSC0003DMG400001620 ID=PGSC0003DMT400004104.v4.03 annot-version=v4.03
Sequence

ATGGCGGACATAGTGAAACAAATTCTAGCACGGCCAATACAATTGGCAGACCAGGTAACA
AAAGCGGCTGATGAAGTTTGTAATTTTAAGGCAGATTGTCTTGAAATTAAAGCCAAAACA
GAGAGGCTCGCCGCGCTGCTAAGACAGGCAGCGCGGGCGAGCAATGACTTGTACGAGCGT
CCAACGCGTCGAATTATTGATGACACGGAACAAGTCTTGGACAAGGCACTTACTCTTGTA
TTCAAATGTTGTGCCAGGGGATTGAGTCGGGTTTTCACGATTATCCCAAATGCTGCATTG
AAGAAAACGTCACAACAGCTTGAGAATTCATGTGGTGATGTTCAATGGCTGTTACGTGTG
TCGACTCCAGCGGATGATCGTGATGATGAGTATCTCGGGCTTCCTCCAATTGCAGCTAAT
GAACCGATTTTGTGTCTGATATGGGAACAGATTGCAATTTTGTGTACAGGGTCGTTAGAA
GATCGTTCTGATGCAGCGGCTTCGCTTGTATCATTGGCTAGGGACAATGAGCGTTACGGG
AAGTTGATTATAGAAGAAGGTGGGGTTGCACCATTGTTGAAATTGGCTAAAGAAGGACGA
ATGGAAGGTCAGGAGAACGCGTCAAGGGCTATTGGTCTTCTTGGTCGAGACCCTGAAAGT
GTTGAACAAATTGTGAATGCTGGTGTTTGTTCTGTGTTTGCGAAGATTCTAAAAGATGGG
CATATGAAAATTCAGGTTGTAGTGGCTTGGGCAATTTCAGAATTGGCTGCAAATCATCAC
AAATGTCAAGATCATTTTGCTCAAGCAAATACTATTAGGCTATTGGTTAGTCATCTTGCT
TTCGAAACAATTCAAGAACATAGTAAGTATGCTATTGCTACCAAACAACAGAACATGTCG
ATACACGCTGCTGCCATGGCACATTCTAATTCTTCTGGTACTAGCAAATTCAGTGACACT
GGAGGTAAACTTGAAGATGATGACAATAGAACTCATAGTAAAATTCTTCATCCTATGGAT
AATCAAACAACCAACCAAATGCATAGTTTGGTTACGAGCGCAATGGCCTTGAAATCCCAG
GCACAGAATGAGCCCAACAATCCTATATCAAGTCCAAATCAACAGCAGCAGCAGCGACAA
AACCCGAATCAGCAGAGGAGCCACCATGTTGGACTGACAGGGACTAGCATTAAAGGGAGG
GAATATGAAGATCCTGCTACAAAAGCTGAAATGAAAGCAATGGCTGCCAGAGCACTTAGG
CATCTGTGTGCAGGAAATGTTAGCATTTGTACTCATATTACAGAATCCCGAGCTCTTTTA
TGCTTTGCCGTTTTGCTAGAGAAAGGCCCTGATGAAGTACAATATCATTCAGCCATGGCA
CTTATGGAGATCACAGGAGTTGCTGAGCTAAATTCAGACTTGAGACGTGCAGCTTTCAAG
CCGACTGCACCTGCTGCCAAAGCTGTGCTTGATCAATTTTTGAGAATTATAAACCTGGAA
GATTCAGAATTGCTCATTCCAAGCATCAGATCTATAGGCCATCTGGCCAGGACCTTTCGA
GCAACGGAAACCAGACTCATTGGTCCATTGGTGGTTCTGTTAGATGATAGGGAACCAGAA
GTAACTAGGGAAGCTGCAATTGCACTGAACAAATTTGCTTCCTCTGATAATTTCCTAAGA
GTCGATCACTGCAAGGCCATAATACAGGCAGGAGGTACCAAGCACCTAGTTCCACATGTT
TACTTTGGTGAACAAATGGTTCAGGTTCCTTGTTTGATTCTCTTGAGTTACATTGCAACA
CATGTTCCTGATAGTGAGGCATTAGCTGATGACAATGCACATATAGTGTTGGAGTGGGCT
ACAAAGCAGGGACACCTAATGCAAGATCCTACAGTTGAAGAACTAGTGAACCAAGGCAGA
GAAAGCATGGAACTTTATCAGTCCAGAGGCTCACGCCTGTGA