Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400004039
CDS Infomation

pacid=37440289 polypeptide=PGSC0003DMP400002887 locus=PGSC0003DMG400001594 ID=PGSC0003DMT400004039.v4.03 annot-version=v4.03
Sequence

ATGGATCAATTAAACCACGGCGGCCTCTATCAACCGAATCAGCTTCCAAATCATTGTTTA
ACAGAGTTAAATCAGCTTCCTTCTGATGTTTCCATGCCTCCCAATGGCTTGCATTCTGAA
TCAAGCAGCAAACAAAAACCTGAAGCAGAACTCAAAGACTCTATTGCTGCAAGAAAAGTG
CAGAAGGCAGATCGAGAAAAATTAAGGAGGGACCGCTTGAACGAGCAATTTTTGGAATTA
GGAAAGACCCTTGATCCTGAGAGGCCTAAAAATGACAAAGCATCCATCCTAAGTGATACC
GTTCAAATGCTGAAGGATTTGACTGCTCAGGTCAGCAGATTAAAATCTGAGTATGCTGCA
CTTACTGATGAAAGCCGTGAGTTGACCCAGGAGAAAAATGATCTCAGAGAAGAGAAGGCG
TCTCTTAAATCTGATATTGAGAGCCTTAATGTCCAATATCAACAAAGAATGAGGACTATG
TATCCATGGGCTGGGATGGATCATTCTATGGTCATGCATCCGCCTTCATATCCGTATCCA
ATGCCCGTTCCGGTTCCAACTGGACCAGTTCCAATGCATCCATCTCTGCAGCCCTATCCT
TTCTTCGGCAATCATAATCCTGCAGTTGTTCCAAACCCTTCATCTTTCGTTCAATACATG
ACTCCCAATACATTGATTGAACAGCAACCGACTCAGTATATGTCTCCAATTATACAACCA
GGTAGTATGACCAGACAAGAATCCAGGAACAAGTCATCAGATCAAGGAGAGAGCAGAATT
GAGAAAAGTGAAGATTCCAATGAAGTGGCAACAGATTTAGAGCTTAAGACACCTGGATCT
ACATCTGAGCAGGACCTTTCATCTGGACAAAAGAAATCCAGAAAGTTGCCAAGGAAGGAT
AACAGCCTCACCGATGGAAGTTCCTCAAGTAAATGTTCATCATCCCATAGTGTACATGCT
GTTTCTTCAAATAGTGTAGTTAGGGGAACAAAGACGGGTGATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400002887
PEP Infomation

pacid=37440289 transcript=PGSC0003DMT400004039 locus=PGSC0003DMG400001594 ID=PGSC0003DMT400004039.v4.03 annot-version=v4.03
Sequence

MDQLNHGGLYQPNQLPNHCLTELNQLPSDVSMPPNGLHSESSSKQKPEAELKDSIAARKV
QKADREKLRRDRLNEQFLELGKTLDPERPKNDKASILSDTVQMLKDLTAQVSRLKSEYAA
LTDESRELTQEKNDLREEKASLKSDIESLNVQYQQRMRTMYPWAGMDHSMVMHPPSYPYP
MPVPVPTGPVPMHPSLQPYPFFGNHNPAVVPNPSSFVQYMTPNTLIEQQPTQYMSPIIQP
GSMTRQESRNKSSDQGESRIEKSEDSNEVATDLELKTPGSTSEQDLSSGQKKSRKLPRKD
NSLTDGSSSSKCSSSHSVHAVSSNSVVRGTKTGD*

Transcript Sequence

Transcript ID

PGSC0003DMT400004039
Transcript Infomation

pacid=37440289 locus=PGSC0003DMG400001594 ID=PGSC0003DMT400004039.v4.03 annot-version=v4.03
Sequence

ATGGATCAATTAAACCACGGCGGCCTCTATCAACCGAATCAGCTTCCAAATCATTGTTTA
ACAGAGTTAAATCAGCTTCCTTCTGATGTTTCCATGCCTCCCAATGGCTTGCATTCTGAA
TCAAGCAGCAAACAAAAACCTGAAGCAGAACTCAAAGACTCTATTGCTGCAAGAAAAGTG
CAGAAGGCAGATCGAGAAAAATTAAGGAGGGACCGCTTGAACGAGCAATTTTTGGAATTA
GGAAAGACCCTTGATCCTGAGAGGCCTAAAAATGACAAAGCATCCATCCTAAGTGATACC
GTTCAAATGCTGAAGGATTTGACTGCTCAGGTCAGCAGATTAAAATCTGAGTATGCTGCA
CTTACTGATGAAAGCCGTGAGTTGACCCAGGAGAAAAATGATCTCAGAGAAGAGAAGGCG
TCTCTTAAATCTGATATTGAGAGCCTTAATGTCCAATATCAACAAAGAATGAGGACTATG
TATCCATGGGCTGGGATGGATCATTCTATGGTCATGCATCCGCCTTCATATCCGTATCCA
ATGCCCGTTCCGGTTCCAACTGGACCAGTTCCAATGCATCCATCTCTGCAGCCCTATCCT
TTCTTCGGCAATCATAATCCTGCAGTTGTTCCAAACCCTTCATCTTTCGTTCAATACATG
ACTCCCAATACATTGATTGAACAGCAACCGACTCAGTATATGTCTCCAATTATACAACCA
GGTAGTATGACCAGACAAGAATCCAGGAACAAGTCATCAGATCAAGGAGAGAGCAGAATT
GAGAAAAGTGAAGATTCCAATGAAGTGGCAACAGATTTAGAGCTTAAGACACCTGGATCT
ACATCTGAGCAGGACCTTTCATCTGGACAAAAGAAATCCAGAAAGTTGCCAAGGAAGGAT
AACAGCCTCACCGATGGAAGTTCCTCAAGTAAATGTTCATCATCCCATAGTGTACATGCT
GTTTCTTCAAATAGTGTAGTTAGGGGAACAAAGACGGGTGATTGA