Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003995
CDS Infomation

pacid=37424595 polypeptide=PGSC0003DMP400002853 locus=PGSC0003DMG400001574 ID=PGSC0003DMT400003995.v4.03 annot-version=v4.03
Sequence

ATGAGTTCTCCGCTCATCTTTCTAAAGCCAATTTTTATTTCAGTAATAATACCCGTTATT
CTCGGAACGGTTTTCTATCAACTGGATTCCTTCGACCCGGCTTCTTATCCGACCCATGTG
CTCTCTACTGACCCGCCCATTGTTGCACCAAAGCGCAATAATCAGATGCTCCGCCGCTCG
GAAAAAATCGGAGTTAACCAGCTGTTATCACCCGAAGACGTAGCGTACGATCAAAAATCC
GGAGTTATATACACTGGATGCGTTGATGGGTGGGTTAAAAAAGTGAAAGTGAACGAATCG
GCGGCAGATTCGACGGTGGAGGATTGGGTTTTCACCGGCGGCAGACCTCTCGGACTTGCT
TTAGGACGTCACGGCGAAGTTATTGTTGCAGATGCGGACAAGGGGTTACTACTGAACGTT
ACTTCAGTGGGTGAGATTAAAGTGCTAACAGAGGAAGCTGAAGGCCTGAAATTCAAATTA
GCAGACGCTGTAGACGTTGCAGAGGATGGAATTATATATTTCTCCGATGCTTCTTACAAA
TATAATATCGAACAGTACATTTATGATATTCTTGAAGGAAGACCCAATGGAAGATTGTTA
AGTTATGATCCATCAACTAAACAGACCAAAACGCTACTTAGCGACCTGTATTTTGCTAAT
GGTGTTGCAGTCTCTCCAGATCAAAATTATGTTATCTTCTGTGAAACTCCTCTGAGGAAA
TGCAAAAAGTATTACATAAAAGGCGAAAAAAAAGGATCTGTGGATATGTTTGTTGATAAT
TTACCTGGATTTCCTGACAACATTCGTTATGATGGTGAAGGACATTATTGGATTGCATTC
GCCTCGGAAAAGACATATTCATGGGACTTGACACTAAGGTATCCATTCATCAGAAAGATA
ATGGCTATAATGGTGAAGTATGTTGGACAACCAAAGGCAGAGAAAAATGGTGGTGTTTTA
TCTGTTGATTTACAAGGAAATCCACTGGAACACTATTATGATGAGGATTTGACAATGGTG
TCAAGTGGCATTAAGATTGGTGATCATCTATACTGTGGCTCTGTTAAGTCTCCATACATA
CTACGCCTCAATCTCAAACAAAATCCTGCAGTTCAAACTTCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400002853
PEP Infomation

pacid=37424595 transcript=PGSC0003DMT400003995 locus=PGSC0003DMG400001574 ID=PGSC0003DMT400003995.v4.03 annot-version=v4.03
Sequence

MSSPLIFLKPIFISVIIPVILGTVFYQLDSFDPASYPTHVLSTDPPIVAPKRNNQMLRRS
EKIGVNQLLSPEDVAYDQKSGVIYTGCVDGWVKKVKVNESAADSTVEDWVFTGGRPLGLA
LGRHGEVIVADADKGLLLNVTSVGEIKVLTEEAEGLKFKLADAVDVAEDGIIYFSDASYK
YNIEQYIYDILEGRPNGRLLSYDPSTKQTKTLLSDLYFANGVAVSPDQNYVIFCETPLRK
CKKYYIKGEKKGSVDMFVDNLPGFPDNIRYDGEGHYWIAFASEKTYSWDLTLRYPFIRKI
MAIMVKYVGQPKAEKNGGVLSVDLQGNPLEHYYDEDLTMVSSGIKIGDHLYCGSVKSPYI
LRLNLKQNPAVQTS*

Transcript Sequence

Transcript ID

PGSC0003DMT400003995
Transcript Infomation

pacid=37424595 locus=PGSC0003DMG400001574 ID=PGSC0003DMT400003995.v4.03 annot-version=v4.03
Sequence

ATGAGTTCTCCGCTCATCTTTCTAAAGCCAATTTTTATTTCAGTAATAATACCCGTTATT
CTCGGAACGGTTTTCTATCAACTGGATTCCTTCGACCCGGCTTCTTATCCGACCCATGTG
CTCTCTACTGACCCGCCCATTGTTGCACCAAAGCGCAATAATCAGATGCTCCGCCGCTCG
GAAAAAATCGGAGTTAACCAGCTGTTATCACCCGAAGACGTAGCGTACGATCAAAAATCC
GGAGTTATATACACTGGATGCGTTGATGGGTGGGTTAAAAAAGTGAAAGTGAACGAATCG
GCGGCAGATTCGACGGTGGAGGATTGGGTTTTCACCGGCGGCAGACCTCTCGGACTTGCT
TTAGGACGTCACGGCGAAGTTATTGTTGCAGATGCGGACAAGGGGTTACTACTGAACGTT
ACTTCAGTGGGTGAGATTAAAGTGCTAACAGAGGAAGCTGAAGGCCTGAAATTCAAATTA
GCAGACGCTGTAGACGTTGCAGAGGATGGAATTATATATTTCTCCGATGCTTCTTACAAA
TATAATATCGAACAGTACATTTATGATATTCTTGAAGGAAGACCCAATGGAAGATTGTTA
AGTTATGATCCATCAACTAAACAGACCAAAACGCTACTTAGCGACCTGTATTTTGCTAAT
GGTGTTGCAGTCTCTCCAGATCAAAATTATGTTATCTTCTGTGAAACTCCTCTGAGGAAA
TGCAAAAAGTATTACATAAAAGGCGAAAAAAAAGGATCTGTGGATATGTTTGTTGATAAT
TTACCTGGATTTCCTGACAACATTCGTTATGATGGTGAAGGACATTATTGGATTGCATTC
GCCTCGGAAAAGACATATTCATGGGACTTGACACTAAGGTATCCATTCATCAGAAAGATA
ATGGCTATAATGGTGAAGTATGTTGGACAACCAAAGGCAGAGAAAAATGGTGGTGTTTTA
TCTGTTGATTTACAAGGAAATCCACTGGAACACTATTATGATGAGGATTTGACAATGGTG
TCAAGTGGCATTAAGATTGGTGATCATCTATACTGTGGCTCTGTTAAGTCTCCATACATA
CTACGCCTCAATCTCAAACAAAATCCTGCAGTTCAAACTTCATAA