Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003992
CDS Infomation

pacid=37425094 polypeptide=PGSC0003DMP400002851 locus=PGSC0003DMG400001573 ID=PGSC0003DMT400003992.v4.03 annot-version=v4.03
Sequence

ATGGCTTGTTCTTGTTTGAGCGAGGATAATTGGTTCGCTCTTTCTCAAATGCGCACCACC
ACCACCACCACCTTGCAGGTGGAAGATCCACAAATAATCGGACCCAATTCCGCCGGCATG
CCCGAATACCGTTTAGAAAAAGTTTTCCCTGTTTACGCTGTTGGCGTTTCGGAACCCGAC
CCGAACTTGATCATCTCTGTCGCTAACACCGCTTCTACTCTTGGTGACCCTATTTGGGAT
GCTGTTAAGCTTGAAGCTAAGCTTGAGGCAGAGAAGGAGCCAATATTAAGCAGCTTCTTG
TACGCGAGTATTTTGACTCATGATTGTTTGGAACGGGCATTGAGCTTTGTTCTTTCCAAC
CGTCTGCAAAATCCTACACTTTTGGCAACTCAATTAATGGACATATTTTCTGATGTAATA
ATGCACAATCGGTGCATTCAATGCTCCATTCGACTTGATTTACAGGCATGTAAAGATAGA
GATCCTTCATGTTTGTCATACTGTTCTGCTCTTTTGTACCTTAAGGGTTATCATGCTTTA
CAAACACATCGAGTTGCACATACGCTATGGAATCAAGGGCGCAAAGTCTTGGCATTGGCG
TTACAAAGTCGAGTTAGTGAGGTTTTTGGAGTTGATATACATCCAGCTGCCCAAATTGGA
GAGGGAATTCTGCTGGATCATGCCACTGGTGTTGTAATTGGTGAAACTGCTGTCATAGGG
AATAGAGTTTCACTTATGCAGGGTGTAACCTTGGGAGGAACTGGGAAAGAGATTGGTGAT
AGGCATCCTAAAATAGGTCAAGGTGCACTGATTGGAGCTAGTGCAACTATACTTGGAAAT
ATAAAAATAGGGGAAGGTGCAATGGTTGGTGCTGGTTCCCTTGTGATGAAGGATGTTCCT
CCCCACAGTATGGTGACAGGAATACCAGCAAAGGTGATTGGTTATGTAGATGATCAAGAT
CCATCTTTAACTATGAAGCATGATGCCAGCAAGGCGTTCTTTAAACAAGTAGCCATTAGC
TGCAAGGAAGCAAGATCCAATGGAGCAGTTGCTTCAAAGGACGATGGCTCAACATGA

Peptide Sequence

PEP ID

PGSC0003DMP400002851
PEP Infomation

pacid=37425094 transcript=PGSC0003DMT400003992 locus=PGSC0003DMG400001573 ID=PGSC0003DMT400003992.v4.03 annot-version=v4.03
Sequence

MACSCLSEDNWFALSQMRTTTTTTLQVEDPQIIGPNSAGMPEYRLEKVFPVYAVGVSEPD
PNLIISVANTASTLGDPIWDAVKLEAKLEAEKEPILSSFLYASILTHDCLERALSFVLSN
RLQNPTLLATQLMDIFSDVIMHNRCIQCSIRLDLQACKDRDPSCLSYCSALLYLKGYHAL
QTHRVAHTLWNQGRKVLALALQSRVSEVFGVDIHPAAQIGEGILLDHATGVVIGETAVIG
NRVSLMQGVTLGGTGKEIGDRHPKIGQGALIGASATILGNIKIGEGAMVGAGSLVMKDVP
PHSMVTGIPAKVIGYVDDQDPSLTMKHDASKAFFKQVAISCKEARSNGAVASKDDGST*

Transcript Sequence

Transcript ID

PGSC0003DMT400003992
Transcript Infomation

pacid=37425094 locus=PGSC0003DMG400001573 ID=PGSC0003DMT400003992.v4.03 annot-version=v4.03
Sequence

ATGGCTTGTTCTTGTTTGAGCGAGGATAATTGGTTCGCTCTTTCTCAAATGCGCACCACC
ACCACCACCACCTTGCAGGTGGAAGATCCACAAATAATCGGACCCAATTCCGCCGGCATG
CCCGAATACCGTTTAGAAAAAGTTTTCCCTGTTTACGCTGTTGGCGTTTCGGAACCCGAC
CCGAACTTGATCATCTCTGTCGCTAACACCGCTTCTACTCTTGGTGACCCTATTTGGGAT
GCTGTTAAGCTTGAAGCTAAGCTTGAGGCAGAGAAGGAGCCAATATTAAGCAGCTTCTTG
TACGCGAGTATTTTGACTCATGATTGTTTGGAACGGGCATTGAGCTTTGTTCTTTCCAAC
CGTCTGCAAAATCCTACACTTTTGGCAACTCAATTAATGGACATATTTTCTGATGTAATA
ATGCACAATCGGTGCATTCAATGCTCCATTCGACTTGATTTACAGGCATGTAAAGATAGA
GATCCTTCATGTTTGTCATACTGTTCTGCTCTTTTGTACCTTAAGGGTTATCATGCTTTA
CAAACACATCGAGTTGCACATACGCTATGGAATCAAGGGCGCAAAGTCTTGGCATTGGCG
TTACAAAGTCGAGTTAGTGAGGTTTTTGGAGTTGATATACATCCAGCTGCCCAAATTGGA
GAGGGAATTCTGCTGGATCATGCCACTGGTGTTGTAATTGGTGAAACTGCTGTCATAGGG
AATAGAGTTTCACTTATGCAGGGTGTAACCTTGGGAGGAACTGGGAAAGAGATTGGTGAT
AGGCATCCTAAAATAGGTCAAGGTGCACTGATTGGAGCTAGTGCAACTATACTTGGAAAT
ATAAAAATAGGGGAAGGTGCAATGGTTGGTGCTGGTTCCCTTGTGATGAAGGATGTTCCT
CCCCACAGTATGGTGACAGGAATACCAGCAAAGGTGATTGGTTATGTAGATGATCAAGAT
CCATCTTTAACTATGAAGCATGATGCCAGCAAGGCGTTCTTTAAACAAGTAGCCATTAGC
TGCAAGGAAGCAAGATCCAATGGAGCAGTTGCTTCAAAGGACGATGGCTCAACATGA