Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003988
CDS Infomation

pacid=37428456 polypeptide=PGSC0003DMP400002847 locus=PGSC0003DMG400001571 ID=PGSC0003DMT400003988.v4.03 annot-version=v4.03
Sequence

ATGGGCGGCGGTGATACTAGTGCTGCGGCGGCAAAAGAGGATAACGAGAATAACGCCACC
GGCGATCAAAAAGTTACAATCAATGTCCGATGTTCCAACGGCTCCAAATTTACCGTTCAG
GTGGCTCTAGACTCAAGTGTTGGATCCTTCAAGTCCACCCTTGCTCAGCACTCCGACATT
CCTGCCGAGCAGCAGAGATTGATCTATAAAGGCCGGATCTTAAAGGACGAGCAAACCCTA
ACAAGCTACGGTCTTGAGGCAGATCATACCGTCCATTTGGTTCGAGGTTTTGCACCAGCT
GCCGCTGTTAATACTGCAAGTACAGTCAATACTGGAAATCCAAATGCTAATCAGAATGCA
CCCTCTGATGCCGCTCCAAATGTAGGTGGACCATTTTCTGGATCGGGCCTTGGTCTTGGT
CTTGGAAGTGGTGGCGGCGGCGGTGGTCTACTTGGAGCTGGCCTTCCGGATTTCGAGCAG
GTCCAGCAGCAGTTGACCCAAAACCCCAATATGATGAGAGACATGCTGAATATGCCTCTC
GTTCAGAATTTAATGAATAACCCAGAAATCATCCGTAACATGATTATGAACAATCCTCAA
ATGCGAGAGATCATGGATCGTAATCCAGAGCTTGCCCACGTTCTCAATGATCCTGCTACT
CTTCGTCAGACAATGGAGGCTGCACGAAACCCTGAACTTATGCGTGAGATGATGCGTAAT
ACTGACAGGGCAATGAGCAATATTGAATCTTCTCCCGAGGGATTTAACATGCTGAGGCGC
ATGTATGAAAATGTCCAAGAGCCTCTCCTAAATGCAACAACTATGGGTGGAGATGCAAGA
AGTGATGTGGGTTCAAACCCGTTCGCAGCTCTTTTGGGGGCTCAGGGTGCGGGGCAAGGC
AGAAACCAGTCAACTAATCCTCCAACTACTGGTTCTGAGGCTACTGCTAACACACCTGCT
CCAAATACTAATCCACTTCCTAATCCTTGGGCTTCTGCTGGCACTGGAGCTGGCCAAACT
AATACCACTGCTAGGTCAAACACTGCTGCGGAAACCAGGGCACCACTGCCTGCTGGCTTA
GGTGGACTTGCACTCCCAGATCTTGAGGGAATGCTGGGTGGCATGCCAGATGCTACTTCA
CTAAATCAGATGATGCAAAACCCAGCCGTCTCACAGATGATGCAGTCTCTCCTCTCAAAT
CCTCAATACATGAACCAGATGCTTGGGATGAATCCACAGCTAAGGAATATGCTTGATTCC
AACTCCCATCTTCGAGAAATGATGCAAAATCCTGAATTTATTCGGCAGATGACTTCCCCT
GAGACAATGCAGCAACTTATGACTTTCCAGCAAGGGCTTTTGTCTCAACTTGGTCGACAA
CCAACGAACCAACCGGGTCAGAATGTGGGAGGTGCAGCCCTTGACAACAACATGGGAATG
GAAATGCTGATGAATATGTTTGGTGGACTTGGGTCAGGGGGTTTGGGTGGTGTCCCCAAC
AGATCCAATGGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400002847
PEP Infomation

pacid=37428456 transcript=PGSC0003DMT400003988 locus=PGSC0003DMG400001571 ID=PGSC0003DMT400003988.v4.03 annot-version=v4.03
Sequence

MGGGDTSAAAAKEDNENNATGDQKVTINVRCSNGSKFTVQVALDSSVGSFKSTLAQHSDI
PAEQQRLIYKGRILKDEQTLTSYGLEADHTVHLVRGFAPAAAVNTASTVNTGNPNANQNA
PSDAAPNVGGPFSGSGLGLGLGSGGGGGGLLGAGLPDFEQVQQQLTQNPNMMRDMLNMPL
VQNLMNNPEIIRNMIMNNPQMREIMDRNPELAHVLNDPATLRQTMEAARNPELMREMMRN
TDRAMSNIESSPEGFNMLRRMYENVQEPLLNATTMGGDARSDVGSNPFAALLGAQGAGQG
RNQSTNPPTTGSEATANTPAPNTNPLPNPWASAGTGAGQTNTTARSNTAAETRAPLPAGL
GGLALPDLEGMLGGMPDATSLNQMMQNPAVSQMMQSLLSNPQYMNQMLGMNPQLRNMLDS
NSHLREMMQNPEFIRQMTSPETMQQLMTFQQGLLSQLGRQPTNQPGQNVGGAALDNNMGM
EMLMNMFGGLGSGGLGGVPNRSNG*

Transcript Sequence

Transcript ID

PGSC0003DMT400003988
Transcript Infomation

pacid=37428456 locus=PGSC0003DMG400001571 ID=PGSC0003DMT400003988.v4.03 annot-version=v4.03
Sequence

ATGGGCGGCGGTGATACTAGTGCTGCGGCGGCAAAAGAGGATAACGAGAATAACGCCACC
GGCGATCAAAAAGTTACAATCAATGTCCGATGTTCCAACGGCTCCAAATTTACCGTTCAG
GTGGCTCTAGACTCAAGTGTTGGATCCTTCAAGTCCACCCTTGCTCAGCACTCCGACATT
CCTGCCGAGCAGCAGAGATTGATCTATAAAGGCCGGATCTTAAAGGACGAGCAAACCCTA
ACAAGCTACGGTCTTGAGGCAGATCATACCGTCCATTTGGTTCGAGGTTTTGCACCAGCT
GCCGCTGTTAATACTGCAAGTACAGTCAATACTGGAAATCCAAATGCTAATCAGAATGCA
CCCTCTGATGCCGCTCCAAATGTAGGTGGACCATTTTCTGGATCGGGCCTTGGTCTTGGT
CTTGGAAGTGGTGGCGGCGGCGGTGGTCTACTTGGAGCTGGCCTTCCGGATTTCGAGCAG
GTCCAGCAGCAGTTGACCCAAAACCCCAATATGATGAGAGACATGCTGAATATGCCTCTC
GTTCAGAATTTAATGAATAACCCAGAAATCATCCGTAACATGATTATGAACAATCCTCAA
ATGCGAGAGATCATGGATCGTAATCCAGAGCTTGCCCACGTTCTCAATGATCCTGCTACT
CTTCGTCAGACAATGGAGGCTGCACGAAACCCTGAACTTATGCGTGAGATGATGCGTAAT
ACTGACAGGGCAATGAGCAATATTGAATCTTCTCCCGAGGGATTTAACATGCTGAGGCGC
ATGTATGAAAATGTCCAAGAGCCTCTCCTAAATGCAACAACTATGGGTGGAGATGCAAGA
AGTGATGTGGGTTCAAACCCGTTCGCAGCTCTTTTGGGGGCTCAGGGTGCGGGGCAAGGC
AGAAACCAGTCAACTAATCCTCCAACTACTGGTTCTGAGGCTACTGCTAACACACCTGCT
CCAAATACTAATCCACTTCCTAATCCTTGGGCTTCTGCTGGCACTGGAGCTGGCCAAACT
AATACCACTGCTAGGTCAAACACTGCTGCGGAAACCAGGGCACCACTGCCTGCTGGCTTA
GGTGGACTTGCACTCCCAGATCTTGAGGGAATGCTGGGTGGCATGCCAGATGCTACTTCA
CTAAATCAGATGATGCAAAACCCAGCCGTCTCACAGATGATGCAGTCTCTCCTCTCAAAT
CCTCAATACATGAACCAGATGCTTGGGATGAATCCACAGCTAAGGAATATGCTTGATTCC
AACTCCCATCTTCGAGAAATGATGCAAAATCCTGAATTTATTCGGCAGATGACTTCCCCT
GAGACAATGCAGCAACTTATGACTTTCCAGCAAGGGCTTTTGTCTCAACTTGGTCGACAA
CCAACGAACCAACCGGGTCAGAATGTGGGAGGTGCAGCCCTTGACAACAACATGGGAATG
GAAATGCTGATGAATATGTTTGGTGGACTTGGGTCAGGGGGTTTGGGTGGTGTCCCCAAC
AGATCCAATGGTTAA