Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003940
CDS Infomation

pacid=37454611 polypeptide=PGSC0003DMP400002807 locus=PGSC0003DMG400001551 ID=PGSC0003DMT400003940.v4.03 annot-version=v4.03
Sequence

ATGTTGCCTAAAGAACCATCATTTTGTATATATAATACAGAGGATGGGGTTGATGAATTA
AAGGAAAATCAAGATTTGGTTAGGTCTGTGACAATAGGGGATATTATATCAGATATAGGT
AGTAGTGATTTCAGTTTTGGGAAAAAGGGAATGGGGTTGATTGAGGAAGATGAGAATGAA
GATGGGGGAAAAAGGGTTTTTTATGAGGTTAATGAGCTAGGATTTGAAGAGAGTGAACCT
GTAATTAGTTCAAAGTACCTTGGTGGGGTTGAGTCTGAACCTTTAGATTTTGATGGAAAT
GGAGATGTTGAGGAATATTATAAAAGGGTTCTTAAAGAAGATCCATCTAACCCTTTGTTT
TTGAGGAATTATGCTCAACTTTTGCAGTCTAAGGGAGATCTTTGTGGAGCTGAACACTAT
TACTTTCAAGCTACACTAGCTGATCCAAAAGATGGAGATACCTTGTCACAGTATGCTAAA
TTAGTATGGGAGCTGCACCAAGATAAAGATAGAGCATCAGATTACTTTGAACGTGCAGTT
CGTGCTGCTCCTGAGAACAGTCATGTTCTTGGAGCATATGCTAGTTTCCTCTGGGACATC
AATGACGATGAAAGTGAGGATGAAATGAACACACAGAGTGATAAGACTAAGATTGAGGAA
AGTGGGGAAGCTACTGTATCCCGGAACTTAGATTACGAAGAAGCTAACAGACCTGTTAGT
CCTCCCTTACATCTTGCAGCAGGATTAGGAATTGGGGTTAATCTAGTTGGTGGTGGCTCT
CCTGTTGATTATACTGCAGCTGTATCTGATATGGACAGAAATGCCGAGGAGGAGTACATG
AGAATGATCAAAGAAAATCCTCATAACCCCGTGCTTTTAAGAAACTATGCTCAGTTTCTT
AGTCAGTCTAAGGGAGACCTACTAGGTGCTGAAGAATATTACTCACGCGCAATACTAGCG
GATCCTACTGATGGAGAAACTATTTCACAGTATGCCATGTTGATATGGCAACTTCATCGG
GATAAAGATAAAGCCTCAACCTACTTTAAGAGGGCAGTTCAAGCTTCTCCAGAAGACGGC
GACGTGCTTGCTGCATATGCTAGATTTCTCTGGCAAACGGAGGAAGATGAAGACGGAGAA
GAAGATGAAACATTAGGTGATCACAACGGTGCACCACCTTTGCAAGGAGTCATGGCTGCA
AATGCCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400002807
PEP Infomation

pacid=37454611 transcript=PGSC0003DMT400003940 locus=PGSC0003DMG400001551 ID=PGSC0003DMT400003940.v4.03 annot-version=v4.03
Sequence

MLPKEPSFCIYNTEDGVDELKENQDLVRSVTIGDIISDIGSSDFSFGKKGMGLIEEDENE
DGGKRVFYEVNELGFEESEPVISSKYLGGVESEPLDFDGNGDVEEYYKRVLKEDPSNPLF
LRNYAQLLQSKGDLCGAEHYYFQATLADPKDGDTLSQYAKLVWELHQDKDRASDYFERAV
RAAPENSHVLGAYASFLWDINDDESEDEMNTQSDKTKIEESGEATVSRNLDYEEANRPVS
PPLHLAAGLGIGVNLVGGGSPVDYTAAVSDMDRNAEEEYMRMIKENPHNPVLLRNYAQFL
SQSKGDLLGAEEYYSRAILADPTDGETISQYAMLIWQLHRDKDKASTYFKRAVQASPEDG
DVLAAYARFLWQTEEDEDGEEDETLGDHNGAPPLQGVMAANA*

Transcript Sequence

Transcript ID

PGSC0003DMT400003940
Transcript Infomation

pacid=37454611 locus=PGSC0003DMG400001551 ID=PGSC0003DMT400003940.v4.03 annot-version=v4.03
Sequence

ATGTTGCCTAAAGAACCATCATTTTGTATATATAATACAGAGGATGGGGTTGATGAATTA
AAGGAAAATCAAGATTTGGTTAGGTCTGTGACAATAGGGGATATTATATCAGATATAGGT
AGTAGTGATTTCAGTTTTGGGAAAAAGGGAATGGGGTTGATTGAGGAAGATGAGAATGAA
GATGGGGGAAAAAGGGTTTTTTATGAGGTTAATGAGCTAGGATTTGAAGAGAGTGAACCT
GTAATTAGTTCAAAGTACCTTGGTGGGGTTGAGTCTGAACCTTTAGATTTTGATGGAAAT
GGAGATGTTGAGGAATATTATAAAAGGGTTCTTAAAGAAGATCCATCTAACCCTTTGTTT
TTGAGGAATTATGCTCAACTTTTGCAGTCTAAGGGAGATCTTTGTGGAGCTGAACACTAT
TACTTTCAAGCTACACTAGCTGATCCAAAAGATGGAGATACCTTGTCACAGTATGCTAAA
TTAGTATGGGAGCTGCACCAAGATAAAGATAGAGCATCAGATTACTTTGAACGTGCAGTT
CGTGCTGCTCCTGAGAACAGTCATGTTCTTGGAGCATATGCTAGTTTCCTCTGGGACATC
AATGACGATGAAAGTGAGGATGAAATGAACACACAGAGTGATAAGACTAAGATTGAGGAA
AGTGGGGAAGCTACTGTATCCCGGAACTTAGATTACGAAGAAGCTAACAGACCTGTTAGT
CCTCCCTTACATCTTGCAGCAGGATTAGGAATTGGGGTTAATCTAGTTGGTGGTGGCTCT
CCTGTTGATTATACTGCAGCTGTATCTGATATGGACAGAAATGCCGAGGAGGAGTACATG
AGAATGATCAAAGAAAATCCTCATAACCCCGTGCTTTTAAGAAACTATGCTCAGTTTCTT
AGTCAGTCTAAGGGAGACCTACTAGGTGCTGAAGAATATTACTCACGCGCAATACTAGCG
GATCCTACTGATGGAGAAACTATTTCACAGTATGCCATGTTGATATGGCAACTTCATCGG
GATAAAGATAAAGCCTCAACCTACTTTAAGAGGGCAGTTCAAGCTTCTCCAGAAGACGGC
GACGTGCTTGCTGCATATGCTAGATTTCTCTGGCAAACGGAGGAAGATGAAGACGGAGAA
GAAGATGAAACATTAGGTGATCACAACGGTGCACCACCTTTGCAAGGAGTCATGGCTGCA
AATGCCTAA